Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001102-TA|BGIBMGA001102-PA|IPR013234|PIGA, GPI anchor
biosynthesis, IPR001296|Glycosyl transferase, group 1
(431 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54186| Best HMM Match : Herpes_U44 (HMM E-Value=7.9) 264 7e-71
SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021) 33 0.45
SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44) 32 1.0
SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_53105| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-11) 31 2.4
SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23) 30 4.2
SB_59719| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_39046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08) 29 5.5
SB_18777| Best HMM Match : RhoGAP (HMM E-Value=4.9) 29 5.5
SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24) 29 5.5
SB_14210| Best HMM Match : RVT_1 (HMM E-Value=0.2) 29 5.5
SB_3299| Best HMM Match : RhoGAP (HMM E-Value=2.2) 29 5.5
SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11) 29 5.5
SB_33577| Best HMM Match : Alpha_L_fucos (HMM E-Value=0.043) 29 5.5
SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_58643| Best HMM Match : RhoGAP (HMM E-Value=3.7) 29 7.3
SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_267| Best HMM Match : RhoGAP (HMM E-Value=3.7) 29 9.6
>SB_54186| Best HMM Match : Herpes_U44 (HMM E-Value=7.9)
Length = 377
Score = 264 bits (648), Expect = 7e-71
Identities = 155/378 (41%), Positives = 222/378 (58%), Gaps = 31/378 (8%)
Query: 22 GGVEEHIFNLSQCLIKRGHK--------------VIVLTHSYGDRVGIRYLTAGLKVYYL 67
GGVE HI+ LSQ LI+RGHK VIV+THSYG R G+RYLT LKVYYL
Sbjct: 2 GGVESHIYQLSQRLIQRGHKTQKSTKKSNRLIYQVIVVTHSYGGRKGVRYLTNYLKVYYL 61
Query: 68 PIRVFYAQCVLPTMICNIALIRNILIRECIEIVHGHSAFSVLCHEVCIIGKLMGLKTVFT 127
P VF+ QC+LPT+ ++ ++R I +RE I IVHGHSAFS LCH+ + + MG+KT+FT
Sbjct: 62 PFGVFHNQCILPTLYLDLPILRYIFLRERITIVHGHSAFSTLCHDALLHARTMGMKTIFT 121
Query: 128 DHSLFGFADTSAVLTNKYLQICLSEIDHCICVSHTGKENTVLRAKVQA----HKVSVIPN 183
DHSLFGFAD S+++TNK+LQ L++++H ICVSHT KENTVLRA Q+ + VSVIPN
Sbjct: 122 DHSLFGFADASSIITNKFLQFSLADVEHVICVSHTSKENTVLRASTQSGMKPYIVSVIPN 181
Query: 184 AVDAFSFIPDPCQRDQKFITIVIVSRLVYRKGVNLMAAVIADMC-PRYP-------NLRF 235
AVDA F P P +R + + RL G +++A AD+ P YP + +
Sbjct: 182 AVDASMFTPCPSKRRKNCSS---GKRLYSVNGGIILSATGADLAIPTYPPTSSFMNSYAY 238
Query: 236 IIG-GDGPKMWLLQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLN-TSLTEAYCMA 293
+G GDGPK +L+EVRE+ + V LLG+L+H ++R+V + + +T +
Sbjct: 239 ALGRGDGPKRVVLEEVREQNQLHDRVELLGTLEHDKVRDVSIYHRTASDLRRITNFWVSD 298
Query: 294 IVEAAACGLKVVSTKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKC 353
+A + S+ + +LV +E I ++ +++
Sbjct: 299 FSDAKPKCREASLVAPNRRFAAFWLSVTGREKSGTQALVDALEDCIRRVRSRSVIDTHTA 358
Query: 354 NRLVREMYSWMDITKRTE 371
+ +R MY+W +++KRTE
Sbjct: 359 HERIRAMYTWTNVSKRTE 376
>SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021)
Length = 496
Score = 33.1 bits (72), Expect = 0.45
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 257 QESVRLLGSLKHSEIRNVLVKGDI-FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEV 315
Q+ V + G +H++++++L I L EA+ M +EA A G+ + G+ EV
Sbjct: 371 QDRVTITGFQEHNQLKDLLPLASISVLGAKAAEAFGMVTIEAMAAGVLPLCHDHSGLSEV 430
Query: 316 LPESMIYLTEPNVGSLVR 333
L ++ P++ +++R
Sbjct: 431 L--EVVRQVTPDLEAMMR 446
>SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44)
Length = 933
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 189 SFIPDPCQRDQKFITIVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFII 237
S + + QRDQ+ V+V L R+G I D +YPN + II
Sbjct: 193 SALKEMAQRDQRRHVCVVVDELFSRRGSKKHIKKIFDKIKKYPNAKVII 241
>SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 31.1 bits (67), Expect = 1.8
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 599 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 657
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ S+
Sbjct: 658 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSSYSLR 714
Query: 367 TKRTEGV 373
+KR V
Sbjct: 715 SKRAHSV 721
>SB_53105| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-11)
Length = 376
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 42 VIVLTHSYGDRVGIRYLTAGLKVYYLPIRVFYAQCVLPTMICNIA--LIRNILIRECIEI 99
+I L + + Y T + YY I + + V+ +M+C + L +++ I +
Sbjct: 127 IIALERLFATQWPFHYRTLRPRNYYTTISITWFVAVVISMLCFLTQYLTNKLMMSTYISM 186
Query: 100 VHGHSAFSVLCHEVCIIGKLMGLKTVFTDH 129
+AF V+C I+ + L DH
Sbjct: 187 TFVFTAFLVICTSYAIVWTKLKLHRRHEDH 216
>SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23)
Length = 496
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/72 (22%), Positives = 37/72 (51%)
Query: 240 DGPKMWLLQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAA 299
D ++ L+E+ + + ++ V ++ E+R + I L+T E + + +VE A
Sbjct: 352 DADRVDNLRELAKSLSIRKHVDFALNVSFDELREFIGSASIGLHTMWNEHFGIGVVECMA 411
Query: 300 CGLKVVSTKVGG 311
G+ +++ + GG
Sbjct: 412 GGIVMLAHESGG 423
>SB_59719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 67 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 125
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 126 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 182
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 183 SKRSHSV 189
>SB_39046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 57 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 115
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 116 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 172
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 173 SKRSHSV 179
>SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08)
Length = 390
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 245 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 303
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 304 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 360
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 361 SKRSHSV 367
>SB_18777| Best HMM Match : RhoGAP (HMM E-Value=4.9)
Length = 260
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 115 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 173
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 174 GSGLSYEDALKRACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 230
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 231 SKRSHSV 237
>SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24)
Length = 1193
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 19 PNTGGVEEHIFNLSQCLIKRGHKVIVLTHSYGDRVGIRYLTAGLKV 64
P V + + +CL KRG + L ++ G++V + L +GL++
Sbjct: 630 PPENSVYQTSCSCEECLRKRGEQACGLEYALGEKVPTKQLPSGLRI 675
>SB_14210| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 712
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 567 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 625
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 626 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 682
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 683 SKRSHSV 689
>SB_3299| Best HMM Match : RhoGAP (HMM E-Value=2.2)
Length = 248
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 103 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 161
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 162 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 218
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 219 SKRSHSV 225
>SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11)
Length = 387
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 242 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 300
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 301 GSGLNYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 357
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 358 SKRSHSV 364
>SB_33577| Best HMM Match : Alpha_L_fucos (HMM E-Value=0.043)
Length = 538
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 309 VGGIPEVLPESMIY-LTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMY-SWMDI 366
VG V P Y + E G+ G EK + G CP C+ +VRE Y W +
Sbjct: 259 VGNEQAVAPLPNWYAVKEGKCGTNTHGAEKDM-GTPTGKQFCPSSCDTVVREHYWFWWNN 317
Query: 367 TKRTEGVYDRIL 378
T+ T R+L
Sbjct: 318 TENTVKTPQRLL 329
>SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 148 ICLSEIDHCICVSHTGKENTVLRAKVQAHKVSVIPNAVDAFSFIPDP 194
+C S I C+C G E T + K + PN S P P
Sbjct: 8 VCWSAITLCVCFIAIGAETTTAKPKTTSSPTPTRPNTTATTSPTPTP 54
>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 29.5 bits (63), Expect = 5.5
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 1018 LYALRKLKSCGVSQRDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 1076
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 1077 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 1133
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 1134 SKRSHSV 1140
>SB_58643| Best HMM Match : RhoGAP (HMM E-Value=3.7)
Length = 295
Score = 29.1 bits (62), Expect = 7.3
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 150 LYALRKLKSCGVPERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 208
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ S+
Sbjct: 209 GSGLSYEDALERACLSSLEARRHNVCR---KFISNIKQGSVLYPLVSSRLISSNSSYSLR 265
Query: 367 TKRTEGV 373
+KR V
Sbjct: 266 SKRAHSV 272
>SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 900
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 78 LPTMICNIALIRNILIRECIEIVHGHSAFSVLCHEVCIIGKLMGLKTVFTDHSL 131
LP ++AL L R E G S+ + + + + KL GL+T+ T+H L
Sbjct: 706 LPAKPLHVALFLTELTRSAEENGVGISSVEGVAYSITWMHKLAGLQTLLTEHPL 759
>SB_267| Best HMM Match : RhoGAP (HMM E-Value=3.7)
Length = 284
Score = 28.7 bits (61), Expect = 9.6
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVS 306
L +R+ C S R L S+ S IR++L + + +L + C A+ L ++
Sbjct: 139 LYALRKLKSCGVSERDLVSVYCSLIRSILEYACVVFS-NLPQYLCAALERIQKRSLGIIF 197
Query: 307 TKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDI 366
+ L + + E ++ R K I++IK+G+++ P +RL+ +
Sbjct: 198 GSGLSYEDALERACLSSLEARRLNVCR---KFISNIKQGSVLYPLVSSRLISSNSPYSLR 254
Query: 367 TKRTEGV 373
+KR+ V
Sbjct: 255 SKRSHSV 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.327 0.142 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,901,058
Number of Sequences: 59808
Number of extensions: 560952
Number of successful extensions: 1322
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 23
length of query: 431
length of database: 16,821,457
effective HSP length: 84
effective length of query: 347
effective length of database: 11,797,585
effective search space: 4093761995
effective search space used: 4093761995
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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