Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001102-TA|BGIBMGA001102-PA|IPR013234|PIGA, GPI anchor
biosynthesis, IPR001296|Glycosyl transferase, group 1
(431 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical pr... 408 e-114
L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promot... 34 0.17
Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 30 3.7
Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 30 3.7
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 29 8.4
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 8.4
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 8.4
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 8.4
>Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical
protein D2085.6 protein.
Length = 444
Score = 408 bits (1005), Expect = e-114
Identities = 201/406 (49%), Positives = 282/406 (69%), Gaps = 6/406 (1%)
Query: 10 VCMASDFFYPNTGGVEEHIFNLSQCLIKRGHKVIVLTHSYGDRVGIRYLTAGLKVYYLPI 69
+ + SDFF PN GGVE HI+ L+QCLI+ GH+V+V+TH YG+R GIRYL+ GLKVYYLP
Sbjct: 10 IALVSDFFCPNAGGVETHIYFLAQCLIELGHRVVVITHGYGNRKGIRYLSNGLKVYYLPF 69
Query: 70 RVFYAQCVLPTMICNIALIRNILIRECIEIVHGHSAFSVLCHEVCIIGKLMGLKTVFTDH 129
V Y L +++ ++ +R +L+RE ++I+HGHS FS L HE +IG LMGL+TVFTDH
Sbjct: 70 IVAYNGATLGSIVGSMPWLRKVLLRENVQIIHGHSTFSSLAHETLMIGGLMGLRTVFTDH 129
Query: 130 SLFGFADTSAVLTNKY-LQICLSEIDHCICVSHTGKENTVLRAKVQAHKVSVIPNAVDAF 188
SLFGFAD SA+LTNK LQ L +D ICVS+T KENTVLR K+ +KVS IPNA++
Sbjct: 130 SLFGFADASAILTNKLVLQYSLINVDQTICVSYTSKENTVLRGKLDPNKVSTIPNAIETS 189
Query: 189 SFIPDPCQRDQKFITIVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGDGPKMWLLQ 248
F PD Q TIV + RLVYRKG +L+ ++ +C R+ ++RFIIGGDGPK L+
Sbjct: 190 LFTPDRNQFFNNPTTIVFLGRLVYRKGADLLCEIVPKVCARHKSVRFIIGGDGPKRIELE 249
Query: 249 EVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTK 308
E+ E+ E V +LG L H++++ VL +G IF+NTSLTEA+CM+IVEAA+CGL VVST+
Sbjct: 250 EMLERFKLHERVVILGMLPHNQVKRVLNQGQIFINTSLTEAFCMSIVEAASCGLHVVSTR 309
Query: 309 VGGIPEVLP-ESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDIT 367
VGG+PEVLP I L EP LV + KA+ ++G +M P + + V +MY+W D+
Sbjct: 310 VGGVPEVLPIGEFISLEEPVPDDLVDALLKAVDRREKGLLMDPTEKHEAVSKMYNWPDVA 369
Query: 368 KRTEGVYDRILLNKNKPLGQ--QLRSYLNSGVWPFLLVISLMYILL 411
RT+ +Y + + +++P G+ +L+ Y + G+ ++ I + I++
Sbjct: 370 ARTQVIYQKAV--ESEPTGRLGRLKGYYDQGIGFGIMYIVVSCIII 413
>L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promoting
complex; seealso mat protein 2 protein.
Length = 728
Score = 34.3 bits (75), Expect = 0.17
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 353 CNRLVREMYSWMDITKRTEGVYDRILLNKNKPLGQQLRSYLNSGVWPFL---LVISLMYI 409
C ++R++ +DI K+ E + +R N + P+ ++S WP L +LM
Sbjct: 454 CEVMLRDVIHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQ 513
Query: 410 LLQLTERIYKRKYIDKARDLRL 431
LQ +Y+ Y+D RD +L
Sbjct: 514 PLQAAMDVYQETYLDVKRDRKL 535
>Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 273 NVLVKGD-IFLNTSLTEAYCMAIVEAAACGLKVVSTKV--GGIPEVLPESMIY-LTEPNV 328
N+ GD + +N Y E G ++++ + GI +V+PESM++ LT ++
Sbjct: 2762 NLKPNGDEVLVNKDNVIEYVYKYAERVLVGKRIITFEAIREGILDVIPESMLFGLTPEDL 2821
Query: 329 GSLVRGIEKAITDIKEGN 346
++ GIE + + N
Sbjct: 2822 RLIICGIESVSISVLQEN 2839
>Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 273 NVLVKGD-IFLNTSLTEAYCMAIVEAAACGLKVVSTKV--GGIPEVLPESMIY-LTEPNV 328
N+ GD + +N Y E G ++++ + GI +V+PESM++ LT ++
Sbjct: 2762 NLKPNGDEVLVNKDNVIEYVYKYAERVLVGKRIITFEAIREGILDVIPESMLFGLTPEDL 2821
Query: 329 GSLVRGIEKAITDIKEGN 346
++ GIE + + N
Sbjct: 2822 RLIICGIESVSISVLQEN 2839
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 163 GKENTVLRAKVQAHKVSVIPNAVDAFSFIPDPCQRDQKF 201
GKEN V + AHK+ + N DA +F P QKF
Sbjct: 99 GKENEVSARQEIAHKLKSVHNYSDATNFDPSKKVITQKF 137
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 163 GKENTVLRAKVQAHKVSVIPNAVDAFSFIPDPCQRDQKF 201
GKEN V + AHK+ + N DA +F P QKF
Sbjct: 99 GKENEVSARQEIAHKLKSVHNYSDATNFDPSKKVITQKF 137
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 163 GKENTVLRAKVQAHKVSVIPNAVDAFSFIPDPCQRDQKF 201
GKEN V + AHK+ + N DA +F P QKF
Sbjct: 99 GKENEVSARQEIAHKLKSVHNYSDATNFDPSKKVITQKF 137
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 163 GKENTVLRAKVQAHKVSVIPNAVDAFSFIPDPCQRDQKF 201
GKEN V + AHK+ + N DA +F P QKF
Sbjct: 99 GKENEVSARQEIAHKLKSVHNYSDATNFDPSKKVITQKF 137
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.142 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,261,172
Number of Sequences: 27539
Number of extensions: 421252
Number of successful extensions: 1086
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1078
Number of HSP's gapped (non-prelim): 10
length of query: 431
length of database: 12,573,161
effective HSP length: 83
effective length of query: 348
effective length of database: 10,287,424
effective search space: 3580023552
effective search space used: 3580023552
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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