GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001101-TA|BGIBMGA001101-PA|IPR000195|RabGAP/TBC
         (381 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    26   1.5  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 121 VLGSEIKGQQITYFNQLKKSVLEVDLMIDKLIFKDV--QLTASNDDQYFVFEDVLYQV-- 176
           +   E  G +I  +N++K  +LE    +D+  F+D+  QL     D   V   +  ++  
Sbjct: 44  IFDGESAGTRIVGYNRMK-FLLESLADLDRQ-FRDLGGQLLVFRGDSVTVLRRLFEELNI 101

Query: 177 -MLCFSRDCDVMQQLKGSIGSPLTVTIKGKQTSTDSLTVFPPSGVIPFHG 225
             LC+ +DC+ + + +    + L  T+  +     S T++ P  VI  +G
Sbjct: 102 KKLCYEQDCEPIWKERDDAVAKLCRTMDVRCVENVSHTLWNPIEVIQTNG 151


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,420
Number of Sequences: 2123
Number of extensions: 16189
Number of successful extensions: 85
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 85
Number of HSP's gapped (non-prelim): 1
length of query: 381
length of database: 516,269
effective HSP length: 65
effective length of query: 316
effective length of database: 378,274
effective search space: 119534584
effective search space used: 119534584
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 49 (23.8 bits)