Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001101-TA|BGIBMGA001101-PA|IPR000195|RabGAP/TBC
(381 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058392-1|AAL13621.1| 509|Drosophila melanogaster GH15768p pro... 355 6e-98
AE014134-890|AAF52227.1| 509|Drosophila melanogaster CG7742-PA ... 355 6e-98
AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA ... 40 0.008
BT010263-1|AAQ23581.1| 363|Drosophila melanogaster RE26521p pro... 33 0.66
AE014297-1325|AAN13513.1| 363|Drosophila melanogaster CG5344-PB... 33 0.66
AE014297-1324|AAF54659.1| 363|Drosophila melanogaster CG5344-PA... 33 0.66
AY058625-1|AAL13854.1| 804|Drosophila melanogaster LD32196p pro... 32 1.1
AE014297-1958|AAF55144.1| 804|Drosophila melanogaster CG12241-P... 32 1.1
BT024295-1|ABC86357.1| 444|Drosophila melanogaster IP12456p pro... 29 8.1
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro... 29 8.1
AE014297-1216|AAF54568.1| 444|Drosophila melanogaster CG6574-PA... 29 8.1
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA... 29 8.1
>AY058392-1|AAL13621.1| 509|Drosophila melanogaster GH15768p
protein.
Length = 509
Score = 355 bits (873), Expect = 6e-98
Identities = 171/292 (58%), Positives = 210/292 (71%), Gaps = 12/292 (4%)
Query: 90 ERVAALGYAPVVQEYLKKG-SPQCLRAKLWAQVLGSEIKGQQITYFNQLKKSVLEVDLMI 148
+R+ +AP+ Q++LKKG +P R LWA VL S++ I Y+ +L+ +V D ++
Sbjct: 228 QRILEARHAPMCQQFLKKGCTPAPYRGALWASVLDSKLHDYDIEYWQKLRNAVWTTDHIV 287
Query: 149 DKLIFKDVQLTASNDDQYFVFEDVLYQVMLCFSRDCDVMQQLKGSIGSPLTVTIKGKQTS 208
DKL+FKD+QLTASNDDQYFVFEDVLYQV+LCFSRD D+ G T +KGK
Sbjct: 288 DKLVFKDIQLTASNDDQYFVFEDVLYQVLLCFSRDTDI-----GGCVEYETFPVKGKTYE 342
Query: 209 TDSLTVFPPSGVIPFHGFTMYATPFCYLYDDPVQLYYTFRAFYIRYWHRLHYISTHPQGI 268
PPSGV+PFHG M+A PFCYLYD PV LYYTFRAFYIRY HRL I+THPQGI
Sbjct: 343 G------PPSGVVPFHGICMFAAPFCYLYDSPVSLYYTFRAFYIRYCHRLTTINTHPQGI 396
Query: 269 VSLCLLYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAILGY 328
VSLCLL+E+LL+ EP LW HFR + I P+RVVFKWLMRAFSGHLPPDQLL+LWD ILG+
Sbjct: 397 VSLCLLFEKLLQTYEPQLWSHFRELQIQPLRVVFKWLMRAFSGHLPPDQLLVLWDLILGF 456
Query: 329 DCXXXXXXXXXXXXSFRKENIFQVNTLQNVDAVLADLSTISVIPLLQLALMR 380
D SFRKE+I QV +L +++A+LADLS+I V+PL+QLAL R
Sbjct: 457 DSLEILPLFAIIILSFRKESIMQVASLDSIEAILADLSSIKVLPLVQLALSR 508
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 6 QKLVASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQ-SKQNRK 53
QKLV +P+V D + TL+ A+K GL+T++RN V++ VRT+ SK + K
Sbjct: 34 QKLVCNPSVDTHDMRNTLEDAIKSAGLETEIRNIVYNLVRTRLSKTDDK 82
>AE014134-890|AAF52227.1| 509|Drosophila melanogaster CG7742-PA
protein.
Length = 509
Score = 355 bits (873), Expect = 6e-98
Identities = 171/292 (58%), Positives = 210/292 (71%), Gaps = 12/292 (4%)
Query: 90 ERVAALGYAPVVQEYLKKG-SPQCLRAKLWAQVLGSEIKGQQITYFNQLKKSVLEVDLMI 148
+R+ +AP+ Q++LKKG +P R LWA VL S++ I Y+ +L+ +V D ++
Sbjct: 228 QRILEARHAPMCQQFLKKGCTPAPYRGALWASVLDSKLHDYDIEYWQKLRNAVWTTDHIV 287
Query: 149 DKLIFKDVQLTASNDDQYFVFEDVLYQVMLCFSRDCDVMQQLKGSIGSPLTVTIKGKQTS 208
DKL+FKD+QLTASNDDQYFVFEDVLYQV+LCFSRD D+ G T +KGK
Sbjct: 288 DKLVFKDIQLTASNDDQYFVFEDVLYQVLLCFSRDTDI-----GGCVEYETFPVKGKTYE 342
Query: 209 TDSLTVFPPSGVIPFHGFTMYATPFCYLYDDPVQLYYTFRAFYIRYWHRLHYISTHPQGI 268
PPSGV+PFHG M+A PFCYLYD PV LYYTFRAFYIRY HRL I+THPQGI
Sbjct: 343 G------PPSGVVPFHGICMFAAPFCYLYDSPVSLYYTFRAFYIRYCHRLTTINTHPQGI 396
Query: 269 VSLCLLYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAILGY 328
VSLCLL+E+LL+ EP LW HFR + I P+RVVFKWLMRAFSGHLPPDQLL+LWD ILG+
Sbjct: 397 VSLCLLFEKLLQTYEPQLWSHFRELQIQPLRVVFKWLMRAFSGHLPPDQLLVLWDLILGF 456
Query: 329 DCXXXXXXXXXXXXSFRKENIFQVNTLQNVDAVLADLSTISVIPLLQLALMR 380
D SFRKE+I QV +L +++A+LADLS+I V+PL+QLAL R
Sbjct: 457 DSLEILPLFAIIILSFRKESIMQVASLDSIEAILADLSSIKVLPLVQLALSR 508
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 6 QKLVASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQ-SKQNRK 53
QKLV +P+V D + TL+ A+K GL+T++RN V++ VRT+ SK + K
Sbjct: 34 QKLVCNPSVDTHDMRNTLEDAIKSAGLETEIRNIVYNLVRTRLSKTDDK 82
>AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA
protein.
Length = 840
Score = 39.5 bits (88), Expect = 0.008
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 223 FHGFTMYATPFCYLYDDPVQLYYTFRAFYIRYWHRLHYISTHPQGIVSLCLLYERLLEAN 282
+ G PF YL + +L + +I + + ++ + I + +L +
Sbjct: 508 WQGLDSLTAPFLYLNFNNEELAFLSLFKFIPKYLQWFFLKDNSAVIKEYLSKFSQLTAFH 567
Query: 283 EPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAIL 326
EPLL H +I+ P W + FS P ++L LWD ++
Sbjct: 568 EPLLAQHLASISFIPELFAIPWFLTMFSHVFPLHKILHLWDKLM 611
>BT010263-1|AAQ23581.1| 363|Drosophila melanogaster RE26521p
protein.
Length = 363
Score = 33.1 bits (72), Expect = 0.66
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 274 LYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAIL 326
+ E LL+ P ++ H + + P+ + W + A + LP + LL +WD L
Sbjct: 210 ILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFL 262
>AE014297-1325|AAN13513.1| 363|Drosophila melanogaster CG5344-PB,
isoform B protein.
Length = 363
Score = 33.1 bits (72), Expect = 0.66
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 274 LYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAIL 326
+ E LL+ P ++ H + + P+ + W + A + LP + LL +WD L
Sbjct: 210 ILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFL 262
>AE014297-1324|AAF54659.1| 363|Drosophila melanogaster CG5344-PA,
isoform A protein.
Length = 363
Score = 33.1 bits (72), Expect = 0.66
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 274 LYERLLEANEPLLWIHFRNININPIRVVFKWLMRAFSGHLPPDQLLLLWDAIL 326
+ E LL+ P ++ H + + P+ + W + A + LP + LL +WD L
Sbjct: 210 ILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFL 262
>AY058625-1|AAL13854.1| 804|Drosophila melanogaster LD32196p
protein.
Length = 804
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 101 VQEYLKKGSPQCLRAKLWAQVLGSEIKGQQI-TYFNQLKKSVLEVDLMIDKLIFKDV 156
++ +++G P LRA++W ++ G+ K Q+ T ++ + K+ LM K I KD+
Sbjct: 157 LRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDL 213
>AE014297-1958|AAF55144.1| 804|Drosophila melanogaster CG12241-PA
protein.
Length = 804
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 101 VQEYLKKGSPQCLRAKLWAQVLGSEIKGQQI-TYFNQLKKSVLEVDLMIDKLIFKDV 156
++ +++G P LRA++W ++ G+ K Q+ T ++ + K+ LM K I KD+
Sbjct: 157 LRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDL 213
>BT024295-1|ABC86357.1| 444|Drosophila melanogaster IP12456p
protein.
Length = 444
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 285 LLWIHFRNININPIRVVFK-WLMRAFSGHLPPDQLL-LLWDAI 325
LLW+HFRN NP V + W +G+L + +LW I
Sbjct: 230 LLWLHFRNAYTNPRVVQWSLWYAIGLAGYLQVTYYVQVLWKVI 272
>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p
protein.
Length = 1265
Score = 29.5 bits (63), Expect = 8.1
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 11 SPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNRKLYLEWSSGEPLLGANPH 70
SP + +FKQ QQ ++ K +LR+ H K +++L ++ S L
Sbjct: 375 SPGLSTYEFKQLEQQNIRLKETLVRLRDLSAHDKHDIQKLSKELEMKRSEVTELERTKEK 434
Query: 71 MASAVPGFVTLEAERVSLGERV-AALGYAPVVQEYLKK 107
+++ + LEA L E+V AALG +V++ +K
Sbjct: 435 LSAKID---ELEAIVADLQEQVDAALGAEEMVEQLAEK 469
>AE014297-1216|AAF54568.1| 444|Drosophila melanogaster CG6574-PA
protein.
Length = 444
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 285 LLWIHFRNININPIRVVFK-WLMRAFSGHLPPDQLL-LLWDAI 325
LLW+HFRN NP V + W +G+L + +LW I
Sbjct: 230 LLWLHFRNAYTNPRVVQWSLWYAIGLAGYLQVTYYVQVLWKVI 272
>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
protein.
Length = 1265
Score = 29.5 bits (63), Expect = 8.1
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 11 SPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNRKLYLEWSSGEPLLGANPH 70
SP + +FKQ QQ ++ K +LR+ H K +++L ++ S L
Sbjct: 375 SPGLSTYEFKQLEQQNIRLKETLVRLRDLSAHDKHDIQKLSKELEMKRSEVTELERTKEK 434
Query: 71 MASAVPGFVTLEAERVSLGERV-AALGYAPVVQEYLKK 107
+++ + LEA L E+V AALG +V++ +K
Sbjct: 435 LSAKID---ELEAIVADLQEQVDAALGAEEMVEQLAEK 469
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.324 0.139 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,400,914
Number of Sequences: 52641
Number of extensions: 705755
Number of successful extensions: 1680
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1665
Number of HSP's gapped (non-prelim): 17
length of query: 381
length of database: 24,830,863
effective HSP length: 86
effective length of query: 295
effective length of database: 20,303,737
effective search space: 5989602415
effective search space used: 5989602415
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 63 (29.5 bits)
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