Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001099-TA|BGIBMGA001099-PA|undefined
(144 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 31 0.091
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 30 0.16
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 0.49
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 0.85
SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|c... 27 0.85
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 1.1
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 27 1.1
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 27 1.5
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 2.6
SPCC1795.07 |||mitochondrial ribosomal protein subunit S37 |Schi... 25 3.4
SPAPB2B4.07 |||ubiquitin family protein, human UBTD1 homolog|Sch... 25 3.4
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 3.4
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 3.4
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 4.5
SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces p... 25 4.5
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 25 4.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 6.0
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 25 6.0
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.0
SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces pomb... 25 6.0
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 25 6.0
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 24 7.9
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 24 7.9
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 24 7.9
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 24 7.9
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 24 7.9
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 24 7.9
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 30.7 bits (66), Expect = 0.091
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 8 QPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPK-TWKKSISNFFRNQL------- 59
QPE TL D +K+ + +E T+Y N K T S++N +L
Sbjct: 540 QPELSTLLLRRDALSTTVSKLQNAYSTVMEETAYLNVKNTELVSLNNQLERELAYLREQQ 599
Query: 60 --RSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSH 117
+ T S+ G + K N +P + + L V F NK +S G N +
Sbjct: 600 HKKRTSSSFGIFNNDKKSNRTISTPSPRESFSRLQMVASSLGFRPKDNKDKESGGYNKRN 659
Query: 118 SKRLAVKKVISSYF 131
SK + +KK S F
Sbjct: 660 SK-IDLKKSFSKRF 672
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 29.9 bits (64), Expect = 0.16
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 67 GDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFA--ETWNKSPKSPGENSSHSKRLAVK 124
G+RP D+FEE D+ + +V RR F E + + GE + SKR +
Sbjct: 151 GNRPLSDIDSFEEPGFGLDEGEELNDEVVRRMHFGGFEDSDAENEKEGEGAHKSKREVMS 210
Query: 125 KVIS 128
++I+
Sbjct: 211 EIIA 214
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 28.3 bits (60), Expect = 0.49
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 44 PKTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQK 87
P+ + SN NQ ++ N + PS + DN E + P Q+
Sbjct: 403 PRPVTNNSSNNNTNQSNASNENSPNAPSAANDNTETTTVNPPQE 446
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 0.85
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 37 ELTSYKNPKTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSL 91
++++ P S+++FF + ST S + S+DN ++ + +W L
Sbjct: 521 QISTSSTPAHDNLSLNDFFEPREASTPSESSNSSIESEDNLDKAVLNKQSQWHDL 575
>SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 392
Score = 27.5 bits (58), Expect = 0.85
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 52 SNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQS 99
S FFR +S N + P + D E K PD+++ L + ++ +S
Sbjct: 34 STFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKS 81
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 1.1
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 5 EGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTS-YKNPKTWKKSISNFFRNQLRSTK 63
E S +ND+ S S+D ++ +E +DS +S ++ + + S S+ + S
Sbjct: 120 ESSSEDNDSSSSSSD----SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESES 175
Query: 64 SNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHS 118
S+E + S S + E + + D S +S +E + S S S S
Sbjct: 176 SSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS 230
Score = 25.8 bits (54), Expect = 2.6
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 5 EGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKS 64
E S ++D+ S S+D ++ +EG+DS +S ++ + + + ++S
Sbjct: 138 ESSSEDSDSSSSSSD----SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESES 193
Query: 65 NEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHS 118
+ D S S + E E + + S + N S S ++ S S
Sbjct: 194 SSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESES 247
Score = 25.4 bits (53), Expect = 3.4
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 5 EGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKS 64
E S +ND+ S S+D + + + ++ + S + ++ S S+ ++ S+ S
Sbjct: 174 ESSSEDNDSSSSSSD-SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS-S 231
Query: 65 NEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHS 118
+ D S S D+ E S S ++ + S S E+ S S
Sbjct: 232 EDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSS 285
Score = 24.2 bits (50), Expect = 7.9
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 5 EGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKS 64
E S +ND+ S S+D + ++ + S + S + K S ++ S+ S
Sbjct: 228 ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDS 287
Query: 65 NEGDRPSGSKDN 76
++ + S S+D+
Sbjct: 288 SDSESESSSEDS 299
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 1.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 59 LRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFA 101
L K N R S S D+F ++ QSLG+ RQSF+
Sbjct: 92 LEVNKKNNFYRRSSSTDDFGISHARSRKEIQSLGRPHTRQSFS 134
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 1.5
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 45 KTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETW 104
K W +F NQL K++ D S S ++F P+ ++ L KV ++ + + +
Sbjct: 224 KEWTNREEKYFENQLHLVKASSSD-VSNSSNSF------PENRYPKLTKVEKQMTKSVSK 276
Query: 105 NKSPKSPGENSSHSKRLAVK 124
+N +K L +
Sbjct: 277 TSQTDKDEDNLDFTKNLLTR 296
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 VFRRQSFAETWNKSPKSPGENSSHSKRLAVK 124
+F SF+ + ++P SPG N S+ AVK
Sbjct: 143 LFPGSSFSASSQQNPSSPGSNDIKSEFAAVK 173
>SPCC1795.07 |||mitochondrial ribosomal protein subunit S37
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 151
Score = 25.4 bits (53), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 9 PENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTW 47
P N +++N KK NKVP G +L S + P TW
Sbjct: 96 PVNGQNTRTNAKTAKKLNKVPRRGYMTLSPASTR-PITW 133
>SPAPB2B4.07 |||ubiquitin family protein, human UBTD1
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 25.4 bits (53), Expect = 3.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 57 NQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAET 103
NQ+ +N G++PSGS K TP+ RR F ET
Sbjct: 8 NQVAGVANNGGEQPSGSNILRLPKLYTPNPLLTKEEVEVRRNEFWET 54
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 3.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 48 KKSISNFFRNQLRSTKS-NEGDRPSGSKDNFEEKEITPDQK--WQSLGKVFR 96
+K I + +Q + T S N+ + S ++N KE+TP +K +S+ K F+
Sbjct: 249 EKKILKTYHSQDKDTASDNDNNTGSSDEENDNLKELTPGKKEYLKSIKKYFQ 300
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.4 bits (53), Expect = 3.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 74 KDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPK 109
K+NF+ EI D W + ++ + F N PK
Sbjct: 355 KENFKNFEIPVDTFWSDIDYMYEYRDFTVESNAFPK 390
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.0 bits (52), Expect = 4.5
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 83 TPDQKWQSLGKVFRRQSFAETWNKSPKSPGEN-SSHSKRLAVKKVISSYFGKSQKVTSAD 141
T ++ W ++ + S A TWN K+ G++ S +V+ V S G + S+
Sbjct: 406 TREKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLPTSDGTSVRSVCVSCCGNFGLIGSSK 465
Query: 142 G 142
G
Sbjct: 466 G 466
>SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 4.5
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 14 LSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSIS-NFFRNQLRSTKSNEGDRPSG 72
+SK +DI + + + D + K+P + S + N R + T S DR +
Sbjct: 74 ISKISDIIKNTVSSSSGDLKDYF-MVQDKSPLEYVSSFAWNSSRFHMNKTISEISDRITS 132
Query: 73 SKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKS 110
+FE T +Q F+ ++ N S KS
Sbjct: 133 EIISFENDIRTRQTSFQQASSAFQNMQKKQSGNLSQKS 170
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 25.0 bits (52), Expect = 4.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 105 NKSPKS--PGENSSHSKRLAVKKVISSYFGKSQKVTSADGE 143
N+ P+S EN HS R+A KV+ F K T DG+
Sbjct: 260 NEIPESLQADENDVHSSRIATLKVLEGIFEKFAS-TLPDGK 299
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 24.6 bits (51), Expect = 6.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 7 SQPENDTLSKSNDICQKKPNKVPAEG 32
SQ E ++ N IC KPN V A+G
Sbjct: 588 SQQEEYIINLVNRICMLKPNLVFAQG 613
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 24.6 bits (51), Expect = 6.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 59 LRSTKSNEGDRPSGSKDNFEEKEITPDQ 86
++ST SN ++ G+ D FEE++I D+
Sbjct: 335 IQSTCSNIEEKHLGTCDTFEERQIGGDR 362
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 24.6 bits (51), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 15 SKSNDICQKKPNKVPAEGTDSLELTSYKNPK 45
SKS D +K+P VP +GT + ++K K
Sbjct: 81 SKSKDSSKKEPVVVPKKGTPKIFQENHKVKK 111
>SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 316
Score = 24.6 bits (51), Expect = 6.0
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 37 ELTSYKNPKTWKKSISNFFRNQLRSTKSN---EGDRPSGSKDNFEEKEITPDQKW 88
E + +P T K + N FR +R T SN G P G+ N K KW
Sbjct: 248 ERDEFVSPSTDKAQLLNRFRESIRPTTSNSSLSGIIP-GATHNVGPKSSPEALKW 301
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 6.0
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 15 SKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKSNEGDRP 70
S S+ + Q K K G+D +L K+ +SI NQ+ ST + P
Sbjct: 284 SFSSMLAQVKKEKAENNGSDGYDLQPTKSQLELYQSILRKRANQVSSTSLTKSSSP 339
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 24.2 bits (50), Expect = 7.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 61 STKSNEGDRPSGSKDNFEEKEITPDQKWQSLGK 93
S+KS DR S + +N +KE D K + L K
Sbjct: 39 SSKSLNNDRISRTIENSLQKETNSDNKIKKLSK 71
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 24.2 bits (50), Expect = 7.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 22 QKKPNKVPAEGTDSLELTSYKN 43
QKK N +P E SLE S KN
Sbjct: 61 QKKNNILPFEDASSLEFFSEKN 82
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 24.2 bits (50), Expect = 7.9
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 7 SQPENDTLSKSNDICQKKP-NKVPAEGTDSLELTSYKNPKTWKKSISNFF 55
S+P +++ SN+ N +P + S K P TW S +N F
Sbjct: 65 SKPSLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKPPLTWSPSSANLF 114
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 7.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 15 SKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKS 64
S S+ C ++ ++ TDSL + Y K KK I+ L TKS
Sbjct: 35 SDSSSTCLQQKIEIQWSITDSLYIAKYGKLKKTKKFIAFDLDGTLIKTKS 84
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 24.2 bits (50), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 5 EGSQPENDTLSKSNDICQKKPNKVPAEGTD 34
EG+ P ++ S + + PN +PA+G D
Sbjct: 585 EGNLPISEVHKSSKQMEKAFPNGIPAQGID 614
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 24.2 bits (50), Expect = 7.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 75 DNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSP 108
DN EK P K ++ ++ ++ FAE ++K+P
Sbjct: 109 DNKTEKVTVPFDKHKNPFLIYVKKRFAECFDKNP 142
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.304 0.122 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,726
Number of Sequences: 5004
Number of extensions: 34134
Number of successful extensions: 81
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 30
length of query: 144
length of database: 2,362,478
effective HSP length: 67
effective length of query: 77
effective length of database: 2,027,210
effective search space: 156095170
effective search space used: 156095170
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 50 (24.2 bits)
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