GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001099-TA|BGIBMGA001099-PA|undefined
         (144 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.56 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   0.74 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   0.98 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   5.2  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   6.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   6.9  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.8 bits (54), Expect = 0.56
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 44  PKTWKKSISNFFRNQLRSTKSNEGDR 69
           PK     I N+FRN++   ++NEG+R
Sbjct: 577 PKYLYDIIGNYFRNRVLLYETNEGNR 602


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 0.74
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 3   CPEGSQPENDTLSKSNDICQKKPNKVPAEG-TDSLELTSYKN 43
           CP+G  P+N        +C   P   P EG   S  + +YK+
Sbjct: 280 CPKGKMPQNSECVPCKGVC---PKTCPGEGIVHSDNIGNYKD 318


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 0.98
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 13/111 (11%)

Query: 16   KSNDICQKKPNKVPAEGTDSLELTSYKNP---------KTWKKSISNFFRNQLRSTKSNE 66
            KSN   Q++  +VP  GT+    TS   P         ++  + +++F  + L S ++ +
Sbjct: 1286 KSNHQQQQQQQQVPGSGTECSASTSEPAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNRQ 1345

Query: 67   GDRPSGSKDNFEEKEITPD-QKWQSLGKVFRRQSFAETWNKSPKSPGENSS 116
               P       + +  TP   +W +      RQS A++ + SPK    N S
Sbjct: 1346 PKAPDADSSKPQSESNTPILLRWNA--NRHNRQSKADSLD-SPKKHRRNGS 1393


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 38   LTSYKNPKTWKKSISNFFRNQLRSTKSNEGDR 69
            L  +KN + W    +NF RN  +  + + G R
Sbjct: 1075 LYQHKNKQDWSNLEANFKRNYYKEGELDLGHR 1106


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 75  DNFEEKEITPDQKWQSLGKVFRRQSFAETWNK 106
           DNF+   I  D+     G   ++QSF+E   K
Sbjct: 67  DNFDTSSIHSDRYNGEAGGRAKKQSFSEALEK 98


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 88   WQSLGKVFRRQSFAETWNKSP 108
            W+ LG +    SF   W ++P
Sbjct: 1067 WRELGSLLDFHSFFTVWEQAP 1087


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.304    0.122    0.351 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,985
Number of Sequences: 2123
Number of extensions: 5560
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 144
length of database: 516,269
effective HSP length: 58
effective length of query: 86
effective length of database: 393,135
effective search space: 33809610
effective search space used: 33809610
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 44 (21.8 bits)