GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001098-TA|BGIBMGA001098-PA|IPR000917|Sulfatase
         (455 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...   179   3e-45
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...   179   3e-45
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    43   4e-04
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    40   0.005
AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...    30   2.9  

>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score =  179 bits (436), Expect = 3e-45
 Identities = 109/324 (33%), Positives = 174/324 (53%), Gaps = 25/324 (7%)

Query: 2   QHGVIYGAEPRGLPLNEKILPQYLKDLGYKTHLVGKWHLGSYKKEYLPLNRGFDSHVGFW 61
           Q+GV    EP G+P     L + ++ L Y T+LVGKWHLG  KKE+LP NRGFD   GF+
Sbjct: 62  QNGVFLHMEPAGVPTMFPFLSENMRQLDYSTYLVGKWHLGYCKKEFLPTNRGFDYFYGFY 121

Query: 62  TGRIDMYDHTTMEQGSWGTDFRRGFEVAHDLF-----------GVYATDVYTDEAIKVVN 110
             +   ++H+  +         +G ++  ++            GVY+TD++TD A+ V++
Sbjct: 122 GPQTGYFNHSADQYHRELKRVVKGLDLFEEVGSGKSVPDFSQNGVYSTDLFTDVAMSVLD 181

Query: 111 SHNKSEPLFLMLAHSAVHSGNPYEPIRAPQKLIDAFKYIDDSARQKFAA--VLSKLDESV 168
           +HN S+P F+ L++ AVH   P   +    K I   K      R    +  +L+ +D ++
Sbjct: 182 NHNNSKPFFMFLSYQAVH---PPLQVSQQSKTIGQGKEATFILRSHAHSTRMLTAMDFAI 238

Query: 169 GKVVKALHTRGLLENSIVVFSTDNGGPAAGFNDNAASNYPLKGVKNTLWEGGVRGAGFLW 228
           G++V+ L    L EN+++VF++DNGG A    +  ASN PL+G K+T+WEGG +   F+ 
Sbjct: 239 GRLVEYLKASNLYENTVIVFTSDNGGTA----NFGASNAPLRGEKDTIWEGGTKTTTFVH 294

Query: 229 SPLLDSKARVAYQKMHISDWLPTLYSAAGGDLSVLENLDGVNQWDAL-SKNTESPRTSVL 287
           SP+   +        H+ DW  T+ S  G  L +    DG+NQW+ L +   +  R   +
Sbjct: 295 SPMYIEEGGTRDMMFHVVDWHATILSITG--LEIDSYGDGINQWEYLKTGRPKFRRFQFV 352

Query: 288 HNIDDIWGIAALTVDKYKLIKGTI 311
           +NID+    +A+    YKLI G +
Sbjct: 353 YNIDNHG--SAIRDGDYKLIVGNV 374


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score =  179 bits (436), Expect = 3e-45
 Identities = 109/324 (33%), Positives = 174/324 (53%), Gaps = 25/324 (7%)

Query: 2   QHGVIYGAEPRGLPLNEKILPQYLKDLGYKTHLVGKWHLGSYKKEYLPLNRGFDSHVGFW 61
           Q+GV    EP G+P     L + ++ L Y T+LVGKWHLG  KKE+LP NRGFD   GF+
Sbjct: 98  QNGVFLHMEPAGVPTMFPFLSENMRQLDYSTYLVGKWHLGYCKKEFLPTNRGFDYFYGFY 157

Query: 62  TGRIDMYDHTTMEQGSWGTDFRRGFEVAHDLF-----------GVYATDVYTDEAIKVVN 110
             +   ++H+  +         +G ++  ++            GVY+TD++TD A+ V++
Sbjct: 158 GPQTGYFNHSADQYHRELKRVVKGLDLFEEVGSGKSVPDFSQNGVYSTDLFTDVAMSVLD 217

Query: 111 SHNKSEPLFLMLAHSAVHSGNPYEPIRAPQKLIDAFKYIDDSARQKFAA--VLSKLDESV 168
           +HN S+P F+ L++ AVH   P   +    K I   K      R    +  +L+ +D ++
Sbjct: 218 NHNNSKPFFMFLSYQAVH---PPLQVSQQSKTIGQGKEATFILRSHAHSTRMLTAMDFAI 274

Query: 169 GKVVKALHTRGLLENSIVVFSTDNGGPAAGFNDNAASNYPLKGVKNTLWEGGVRGAGFLW 228
           G++V+ L    L EN+++VF++DNGG A    +  ASN PL+G K+T+WEGG +   F+ 
Sbjct: 275 GRLVEYLKASNLYENTVIVFTSDNGGTA----NFGASNAPLRGEKDTIWEGGTKTTTFVH 330

Query: 229 SPLLDSKARVAYQKMHISDWLPTLYSAAGGDLSVLENLDGVNQWDAL-SKNTESPRTSVL 287
           SP+   +        H+ DW  T+ S  G  L +    DG+NQW+ L +   +  R   +
Sbjct: 331 SPMYIEEGGTRDMMFHVVDWHATILSITG--LEIDSYGDGINQWEYLKTGRPKFRRFQFV 388

Query: 288 HNIDDIWGIAALTVDKYKLIKGTI 311
           +NID+    +A+    YKLI G +
Sbjct: 389 YNIDNHG--SAIRDGDYKLIVGNV 410


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 6/52 (11%)

Query: 13  GLPLNEKILPQYLKDLGYKTHLVGKWHLGSYKKE-----YLPLNRGFDSHVG 59
           GLP +E  + + L++ GY T +VGKWHLG  +       +LP  RGF+ +VG
Sbjct: 113 GLPKSETTMAEMLQEAGYATGMVGKWHLGINENNATDGAHLPSKRGFE-YVG 163


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 18  EKILPQYLKDLGYKTHLVGKWHLGSYKKEYLPLNRGFDSHVGFWTGRIDMYDHTTMEQGS 77
           +K +  YL++ GY+T  +GK +L  Y   Y+P   G+D     W   +           S
Sbjct: 115 KKSIGVYLQEAGYRTAYLGK-YLNEYDGSYIP--PGWDE----WHAIVKNSKFYNYTMNS 167

Query: 78  WGTDFRRGFEVAHDLFGVYATDVYTDEAIKVVNSHNKS---EPLFLMLAHSAVHSGNPYE 134
            G   + G E   D    Y TD+ T+ ++K ++ H K    +P  L++++ A H   P +
Sbjct: 168 NGEREKFGSEYEKD----YFTDLVTNRSLKFIDKHIKIRAWQPFALIISYPAPH--GPED 221

Query: 135 PIRAPQ 140
           P  APQ
Sbjct: 222 P--APQ 225


>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 133 YEPIRAPQKLIDAFKYIDDSARQKFAAVLSKLDESVGKVVKAL 175
           Y+   APQKL+DA  ++DD    K    +  L  +   + KAL
Sbjct: 169 YKSPMAPQKLVDALSWMDDETLTKITPKILGLRPNTYTLTKAL 211


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.317    0.136    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,808,239
Number of Sequences: 27539
Number of extensions: 512781
Number of successful extensions: 956
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 8
length of query: 455
length of database: 12,573,161
effective HSP length: 84
effective length of query: 371
effective length of database: 10,259,885
effective search space: 3806417335
effective search space used: 3806417335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)