Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001097-TA|BGIBMGA001097-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase
         (617 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   4.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   8.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   8.2  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 388 NPRRIPNPDYFKDDH 402
           NP+  PNPD F  D+
Sbjct: 98  NPKYFPNPDKFDPDN 112


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 271 DKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNA 307
           D KP+ W   E   DP  T    + E++  ++    A
Sbjct: 97  DNKPDYWKALEAKYDPDGTYKKRYFESQKDEVSKVEA 133


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 262 PPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWD 295
           P  + DD +D    D D+REK       K DD D
Sbjct: 152 PKNKTDDDDDALVSDSDDREK---DEEDKRDDTD 182


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.135    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,807
Number of Sequences: 317
Number of extensions: 8365
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 3
length of query: 617
length of database: 114,650
effective HSP length: 61
effective length of query: 556
effective length of database: 95,313
effective search space: 52994028
effective search space used: 52994028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)