Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001097-TA|BGIBMGA001097-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 409 e-115
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 41 6e-04
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 31 0.62
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 30 0.82
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.4
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 29 1.9
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 29 1.9
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 29 2.5
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 28 3.3
SPBC1271.13 |mrpl8||mitochondrial ribosomal protein subunit L8|S... 28 3.3
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 28 4.4
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 27 7.7
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 409 bits (1008), Expect = e-115
Identities = 192/395 (48%), Positives = 247/395 (62%), Gaps = 14/395 (3%)
Query: 64 ENAFKRKWIKSEAKK--QGVDENIAKYDGKWEIQQPIRK-ILKNDFGLVLTTEAKHAAIS 120
+ A+ +WI S AK+ G++E Y G+W +++ LK + GLV+ EA H AIS
Sbjct: 47 QGAWSERWIPSHAKRFVNGIEE--MSYVGEWTVEESSGPGALKGEAGLVMKDEAAHHAIS 104
Query: 121 TLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTPYTIMFG 180
D+P K L+VQYEV +EG NCGGAY+KLL++ T+ + + Y IMFG
Sbjct: 105 YEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLAEPTHGEMS-----NSIDYRIMFG 159
Query: 181 PDKCGNDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVRPDNTFSI 240
PDKCG ++++HFIF+HKNP G EKH R + K +LYTLIV+PD TF +
Sbjct: 160 PDKCGVNDRVHFIFKHKNPLTGEYSEKHLDS---RPASLLKPGITNLYTLIVKPDQTFEV 216
Query: 241 LVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPA 300
++ V GSL DF PPV PP EI DP D KP DW + +I DP+A KPDDWDE P
Sbjct: 217 RINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPR 276
Query: 301 QIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPACESAPGCGQWA 360
I DP+A+KPE WL+DEP IPDP A KP DWD+E DG W + + NP C GCG+W
Sbjct: 277 MIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWK 336
Query: 361 PPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTPIHGVGFELWSMS 420
PP + NPNY+G W P+IPNP + G+W PR+IPNPDYF DDHP P++GVGFELW+M
Sbjct: 337 PPMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQ 396
Query: 421 PMLLFDNVLVTDDFALAERWAQQTFVLKKAKLSRD 455
P + F N+ V AER +TF L K K R+
Sbjct: 397 PNIRFSNIYVGHSIEDAERLGNETF-LPKLKAERE 430
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 90 GKWEIQQPIRKILKNDFGLV-LTTEAKHAAISTLLDKPF-EFKNKPLIVQYEVTMQEGQN 147
G W++ + L++++GL+ L + H IS L + + + P+++ ++V +
Sbjct: 58 GVWDLVEAPGSHLRDEYGLITLKSNKPHILISNLENPTTRQSSSVPIVLSFQVKPTKPWT 117
Query: 148 CGGAYIKLLSKGTNTKADLRKFHDQTPYTIMFGPDKCG 185
CG AY+ L+ + +N K + P I FG KCG
Sbjct: 118 CGHAYVSLVHQ-SNPK----NVSKEPPSVIRFGVKKCG 150
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 18 FGNTRLTNANEVDQNDEATVEIEEDDQYVSPELNSDNVYLS-EHFDDENAFKRKWIKSEA 76
F + L++ D ++E E+E+D++ V +SD S F +E +R IK +
Sbjct: 147 FNSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQARSRRRFSEETTQRRAEIKEKR 206
Query: 77 KKQ 79
KK+
Sbjct: 207 KKR 209
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 30.3 bits (65), Expect = 0.82
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 218 DIYKDKEPHLYTLIVRPDNTFSILVDNKE---VNAGSLLEDFTPPVNPPEEID--DPNDK 272
DIYK P LI N IL D ++ L+ P + P + D +
Sbjct: 510 DIYKSIRPLFLALIPSKANAVYILKDERKQLVAEVTDLINKLGPELFPDFDPDRITTTIE 569
Query: 273 KPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNA-IKPEGWLDDEPEMIPDPSAVKPSD 331
KPE + + S D D D N+ + L + P+PSA+ PSD
Sbjct: 570 KPERPSRFARRLSSSVAS--DVDNLSQLHDTDLNSEVSAPAPLQNVYLYSPNPSALPPSD 627
Query: 332 WDEEMDGTWEAALVDN 347
+EE D +A L+ N
Sbjct: 628 -EEEKDINDKAKLIRN 642
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.5 bits (63), Expect = 1.4
Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 269 PNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLDDE-PEMIP----D 323
P P W V S + P W +PA P+ P W P+ P +
Sbjct: 401 PQAGHPPPWAAASTSVSSSTSSPAPW--AKPASSAAPS--NPAPWQQPAAPQSAPALSMN 456
Query: 324 PSAVKPSDWDEEMDGTWEAALVDNPACESAPGCGQWAPPTV---PNPNYKGIWRAPLIPN 380
PS++ P + + LV + PG PPT P I AP +PN
Sbjct: 457 PSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPN 516
Query: 381 PN 382
N
Sbjct: 517 LN 518
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 29.1 bits (62), Expect = 1.9
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 195 RHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVRPDNTFSILVDNKEVNAGSLLE 254
+ K PK E KK T LDD+ KD + ++ R T + + E E
Sbjct: 288 KQKGPKAIARIEFLIKKLTSLLDDVRKDTREN---VVRRQTLTAAERLAEVEAAEREAFE 344
Query: 255 DFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWD 295
TP V+ + N + D D+ EKI +P P WD
Sbjct: 345 QSTPSVSV-----EGNQDEESDQDDEEKIYNP-LKLPLGWD 379
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 240 ILVDNKEVNAGSLLEDFTPPVNPPEEIDD-PNDKKPEDWDEREKIVDPSATKPDDWDETE 298
I +DN +++ G ++ PP P + + K+P+ D R I PS T+P TE
Sbjct: 67 ITIDNIDLSKGI---EYPPPEKPKKAHGKGKSSKRPKAVDRRRSITAPSKTEPST-PSTE 122
Query: 299 PAQIKDPNAIKPEG 312
+ P+ G
Sbjct: 123 KPEPSTPSGESDHG 136
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 272 KKPEDWDEREKIVDPSATKPDDWDETEPAQIK 303
K P REKI+ P K W+E P++IK
Sbjct: 377 KSPTQMAAREKIIIPIHQKLKAWEENLPSEIK 408
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 18 FGNTRLTNANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAK 77
+ T + E + E V + D EL+ D +Y+ D+N +K +++A
Sbjct: 162 YNPTTKSYLEEFESQKEKLVYLSADSDNTITELDEDKIYIIGAIVDKNRYK-NLCQNKAS 220
Query: 78 KQGV 81
+QG+
Sbjct: 221 EQGI 224
>SPBC1271.13 |mrpl8||mitochondrial ribosomal protein subunit
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 207
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 41 EDDQYVSPELNSDNVYLSEHFDDENAFKRKWIKSE 75
E DQ V E S++ L E +DE K+ W + +
Sbjct: 165 EFDQLVQKEKESEHARLKEDHEDEKTVKKDWKRGD 199
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.9 bits (59), Expect = 4.4
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 264 EEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLDDEPEMIPD 323
EEID DK R P A KP +++ + D KPE LD E +P
Sbjct: 487 EEIDKITDKIEVSKPLRNS--GPLAFKP--FEKISANKQTDLLQNKPEALLDLENRFLPK 542
Query: 324 PSAVKPSDWDEEMDGTWEAALVDNPACES 352
PS KPS++ + G+ + +D P+ ++
Sbjct: 543 PSP-KPSEFSSSV-GSKQNLSMDIPSVQN 569
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 76 AKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEAKHAAISTLLDKPFEFKN 131
A QG D+ + + D + I ++L FG +L TE L++ F N
Sbjct: 793 AAPQGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINSILHFAN 848
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.135 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,250,330
Number of Sequences: 5004
Number of extensions: 159796
Number of successful extensions: 337
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 317
Number of HSP's gapped (non-prelim): 16
length of query: 617
length of database: 2,362,478
effective HSP length: 77
effective length of query: 540
effective length of database: 1,977,170
effective search space: 1067671800
effective search space used: 1067671800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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