Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001097-TA|BGIBMGA001097-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase
(617 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 392 e-109
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 379 e-105
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 217 2e-56
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 211 9e-55
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 201 1e-51
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 129 5e-30
At5g08240.1 68418.m00967 expressed protein 35 0.18
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 34 0.32
At3g49190.1 68416.m05376 condensation domain-containing protein ... 33 0.56
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.74
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 32 0.98
At1g48250.1 68414.m05388 hypothetical protein 32 0.98
At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /... 32 1.3
At4g20840.1 68417.m03024 FAD-binding domain-containing protein s... 32 1.3
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 32 1.3
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 32 1.3
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 31 1.7
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 31 2.3
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 31 2.3
At5g19260.1 68418.m02293 expressed protein various predicted pro... 31 3.0
At2g40020.1 68415.m04918 expressed protein 31 3.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 3.0
At5g55580.1 68418.m06929 mitochondrial transcription termination... 30 3.9
At2g03500.1 68415.m00309 myb family transcription factor contain... 30 3.9
At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof... 30 5.2
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 30 5.2
At5g05520.1 68418.m00599 outer membrane OMP85 family protein con... 30 5.2
At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein... 30 5.2
At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family pr... 29 6.9
At5g54410.1 68418.m06777 hypothetical protein 29 6.9
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 6.9
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 6.9
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 6.9
At1g64500.1 68414.m07312 glutaredoxin family protein 29 6.9
At5g45010.1 68418.m05519 DSS1/SEM1 family protein contains Pfam ... 29 9.1
At1g64750.2 68414.m07342 DSS1/SEM1 family protein contains Pfam ... 29 9.1
At1g64750.1 68414.m07341 DSS1/SEM1 family protein contains Pfam ... 29 9.1
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 29 9.1
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 392 bits (966), Expect = e-109
Identities = 191/395 (48%), Positives = 245/395 (62%), Gaps = 22/395 (5%)
Query: 53 DNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTT 112
D L E FD+ F +WI V +N + Y+G W+ + D+GL+++
Sbjct: 27 DQTVLYESFDEP--FDGRWI--------VSKN-SDYEGVWK---HAKSEGHEDYGLLVSE 72
Query: 113 EAKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQ 172
+A+ I LD+P K +++QYEV QEG CGGAY+K L + + F +
Sbjct: 73 KARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYL-RPQEAGWTPQGFDSE 131
Query: 173 TPYTIMFGPDKCGNDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIV 232
+PY+IMFGPDKCG NK+HFI +HKNPK+G E H K P + DK H+YT I+
Sbjct: 132 SPYSIMFGPDKCGGTNKVHFILKHKNPKSGEYVEHHLKFPPS----VPYDKLSHVYTAIL 187
Query: 233 RPDNTFSILVDNKEVNAGSLL--EDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATK 290
+PDN ILVD +E +LL EDF P + P + I DP DKKPEDWDER KI DP+A K
Sbjct: 188 KPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVK 247
Query: 291 PDDWDETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPAC 350
P+DWDE P +I+D A KPEGWLDDEPE + DP A KP DWD+E DG WEA +DNP C
Sbjct: 248 PEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKC 307
Query: 351 ESAPGCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTPIH 410
E+APGCG+W P NP YKG W +PLI NP YKG W PR IPNPDYF+ D P PI
Sbjct: 308 EAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRP-DYEPIA 366
Query: 411 GVGFELWSMSPMLLFDNVLVTDDFALAERWAQQTF 445
+G E+W+M +LFDN+L+ D +AE + Q T+
Sbjct: 367 AIGIEIWTMQDGILFDNILIAKDEKVAETYRQTTW 401
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 379 bits (933), Expect = e-105
Identities = 187/397 (47%), Positives = 243/397 (61%), Gaps = 24/397 (6%)
Query: 53 DNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTT 112
D L E FD+ F +W+ SE A+Y G W+ ++ +D+GL+++
Sbjct: 27 DQTILYESFDEP--FDGRWVVSEK---------AEYQGVWKHEKSEGH---DDYGLLVSE 72
Query: 113 EAKHAAISTLLD--KPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFH 170
+AK I LD +P +++QYE QEG CGGAY+K L + + F
Sbjct: 73 KAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYL-RPQEAGWVPQGFD 131
Query: 171 DQTPYTIMFGPDKCGNDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTL 230
+ +PY+IMFGPDKCG NK+HFI +HKNPK+G E H K P + D H+YT
Sbjct: 132 NDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPS----VPFDMLSHVYTA 187
Query: 231 IVRPDNTFSILVDNKEVNAGSLL--EDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSA 288
+++ DN ILVD +E G+LL EDF PP+ P + I DP DKKPEDWDER KI DP+A
Sbjct: 188 VLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNA 247
Query: 289 TKPDDWDETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNP 348
KPDDWDE P +I+D A KPEGWLDDEP + DP A KP DWD+E DG WEA V N
Sbjct: 248 VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNT 307
Query: 349 ACESAPGCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTP 408
CE+APGCG+W P NP YKG W +PLI NP YKG W PR IPNPDYF+ + P + P
Sbjct: 308 KCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERP-NLEP 366
Query: 409 IHGVGFELWSMSPMLLFDNVLVTDDFALAERWAQQTF 445
I +G E+W+M +LFDN+L++ D +AE + Q T+
Sbjct: 367 IAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTW 403
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 217 bits (530), Expect = 2e-56
Identities = 149/393 (37%), Positives = 205/393 (52%), Gaps = 67/393 (17%)
Query: 55 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEA 114
V E FDD ++ +W+KSE KK D+N A G+W+ ND G+ + +
Sbjct: 24 VIFEERFDD--GWENRWVKSEWKK---DDNTA---GEWKHTAGNWSGDANDKGIQTSEDY 75
Query: 115 KHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTP 174
+ AIS + F K+K L+ Q+ V ++ +CGG Y+KLLS D +KF TP
Sbjct: 76 RFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDV----DQKKFGGDTP 130
Query: 175 YTIMFGPDKCG-NDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVR 233
Y+IMFGPD CG + K+H I + N N I++ P + D+ H+YT I+R
Sbjct: 131 YSIMFGPDICGYSTKKVHAILTY-NEANHLIKKD---VPCET------DQLTHVYTFILR 180
Query: 234 PDNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDD 293
PD T+SIL+DN E GSL D+ + PP++I DP+ KKPEDWDE+E I DP KPD
Sbjct: 181 PDATYSILIDNVEKQTGSLYSDWD--LLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDG 238
Query: 294 WDETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPACESA 353
+D+ P +I D ++ KPE W D+E DG W A + NP
Sbjct: 239 YDDI-PKEIPDTDSKKPEDW-------------------DDEEDGEWTAPTIPNPEY--- 275
Query: 354 PGCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTP-IHGV 412
G+W P + NPNYKG W APLI NP+ FKDD + P + V
Sbjct: 276 --MGEWKPKQIKNPNYKGKWEAPLIDNPD---------------FKDDPELYVFPKLKYV 318
Query: 413 GFELWSMSPMLLFDNVLVTDDFALAERWAQQTF 445
G ELW + LFDNVL+ DD A++ A +T+
Sbjct: 319 GLELWQVKSGSLFDNVLICDDPDYAKKLADETW 351
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 211 bits (516), Expect = 9e-55
Identities = 145/396 (36%), Positives = 205/396 (51%), Gaps = 67/396 (16%)
Query: 52 SDNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLT 111
S V E F+D ++++W+KS+ KK D+N A G+W+ ND G+ +
Sbjct: 21 SAEVIFEEKFED--GWEKRWVKSDWKK---DDNTA---GEWKHTAGNWSGDANDKGIQTS 72
Query: 112 TEAKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHD 171
+ + AIS + F K+K L+ Q+ V ++ +CGG Y+KLLS D KF
Sbjct: 73 EDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDV----DQTKFGG 127
Query: 172 QTPYTIMFGPDKCG-NDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTL 230
TPY+IMFGPD CG + K+H I + NGT + P + D+ H+YT
Sbjct: 128 DTPYSIMFGPDICGYSTKKVHAILTY----NGTNHLIKKEVPCET------DQLTHVYTF 177
Query: 231 IVRPDNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATK 290
++RPD T+SIL+DN E GSL D+ + P ++I DP+ KKPEDWD++E I DP TK
Sbjct: 178 VLRPDATYSILIDNVEKQTGSLYSDWD--LLPAKKIKDPSAKKPEDWDDKEYIPDPEDTK 235
Query: 291 PDDWDETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPAC 350
P +D+ P +I D +A KPE W D+E DG W A + NP
Sbjct: 236 PAGYDDI-PKEIPDTDAKKPEDW-------------------DDEEDGEWTAPTIPNPEY 275
Query: 351 ESAPGCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTP-I 409
G+W P + NP YKG W+AP+I NP FKDD + P +
Sbjct: 276 N-----GEWKPKKIKNPAYKGKWKAPMIDNPE---------------FKDDPELYVFPKL 315
Query: 410 HGVGFELWSMSPMLLFDNVLVTDDFALAERWAQQTF 445
VG ELW + LFDNVLV+DD A++ A++T+
Sbjct: 316 KYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETW 351
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 201 bits (490), Expect = 1e-51
Identities = 142/385 (36%), Positives = 194/385 (50%), Gaps = 67/385 (17%)
Query: 55 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYD-GKWEIQQPIRKILKNDFGLVLTTE 113
++L EHF E +K +W+ S+ K+ K+ GKW P K G+ +
Sbjct: 30 IFLEEHF--EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWP-GDPDNK------GIQTYND 80
Query: 114 AKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQT 173
AKH AIS + + F KN+ L+VQY V +++ CGGAYIKLLS N K +F T
Sbjct: 81 AKHYAISAKIPE-FSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQK----QFGGDT 135
Query: 174 PYTIMFGPDKCGNDNK-LHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIV 232
PY++MFGPD CG K LH I ++ +N I KK Q DK H YT I+
Sbjct: 136 PYSLMFGPDICGTQTKKLHVIVSYQG-QNYPI-----KKDLQ----CETDKLNHFYTFIL 185
Query: 233 RPDNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPD 292
RPD ++S+LVDNKE GS+ D+ + PP +I N KKPEDWD+RE I DP+ KP+
Sbjct: 186 RPDASYSVLVDNKEREFGSMYTDWD--ILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPE 243
Query: 293 DWDETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPACES 352
+D P +I D A +PE W DEE +G WE + N A +
Sbjct: 244 GFDSI-PREIPDRKAKEPEDW-------------------DEEENGLWEPPKIPNSAYK- 282
Query: 353 APGCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTPIHGV 412
G W + NPNYKG W+ P I NP ++ +PD + + I
Sbjct: 283 ----GPWKAKRIKNPNYKGKWKNPWIDNPEFE--------DDPDL------YVLKSIKYA 324
Query: 413 GFELWSMSPMLLFDNVLVTDDFALA 437
G E+W + +FDN+L+ DD A A
Sbjct: 325 GIEVWQVKAGSIFDNILICDDPAYA 349
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 129 bits (312), Expect = 5e-30
Identities = 79/203 (38%), Positives = 102/203 (50%), Gaps = 41/203 (20%)
Query: 235 DNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDW 294
D +S+LVDNKE GS+ D+ + PP +I N KK P+DW
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWD--ILPPRKIKVKNAKK-----------------PEDW 174
Query: 295 DETEPAQIKDPNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNPACESAP 354
D+ E I DPN +KPEG+ D P IPD A +P DWDEE +G WE
Sbjct: 175 DDRE--YIDDPNDVKPEGF-DSIPREIPDRKAKEPEDWDEEENGLWE------------- 218
Query: 355 GCGQWAPPTVPNPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTPIHGVGF 414
PP +PN YKG W+A I NPNYKGKW I NP++ D + + I G
Sbjct: 219 ------PPKIPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGI 272
Query: 415 ELWSMSPMLLFDNVLVTDDFALA 437
E+W + +FDN+L+ DD A A
Sbjct: 273 EVWQVKAGSIFDNILICDDPAYA 295
Score = 78.6 bits (185), Expect = 1e-14
Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 50/275 (18%)
Query: 55 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYD-GKWEIQQPIRKILKNDFGLVLTTE 113
++L EHF E +K +W+ S+ K+ K+ GKW P K G+ +
Sbjct: 30 IFLEEHF--EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWP-GDPDNK------GIQTYND 80
Query: 114 AKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQT 173
AKH AIS + + F KN+ L+VQY V +++ CGGAYIKLLS N K +F T
Sbjct: 81 AKHYAISAKIPE-FSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQK----QFGGDT 135
Query: 174 PYTIMFGPDKCGNDNKLHFIFRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVR 233
PY+++ +K ++ + P+ I+ K++KKP D Y D +P+ V+
Sbjct: 136 PYSVLV-DNKEREFGSMYTDWDILPPRK--IKVKNAKKPEDWDDREYID-DPN----DVK 187
Query: 234 PDNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREK-IVDPSATKPD 292
P+ SI P EI D K+PEDWDE E + +P
Sbjct: 188 PEGFDSI----------------------PREIPDRKAKEPEDWDEEENGLWEPPKIPNS 225
Query: 293 DWDETEPA-QIKDPN--AIKPEGWLDDEPEMIPDP 324
+ A +IK+PN W+D+ PE DP
Sbjct: 226 AYKGPWKAKRIKNPNYKGKWKNPWIDN-PEFEDDP 259
>At5g08240.1 68418.m00967 expressed protein
Length = 258
Score = 34.7 bits (76), Expect = 0.18
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 194 FRHKNPKNGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVRPDNTFSILVDNKEVNAGSL- 252
FR KN + + ++KPT R++D DK+ L ++I R + +I VD+K +N +
Sbjct: 60 FRLKNSEIKPSPIEETEKPTSRVEDETDDKQKPL-SVIRRITDRKNIPVDDKAMNQETKE 118
Query: 253 -----LEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNA 307
L D TP + P I+ K + ER + KPD +P + ++ +
Sbjct: 119 TKPKDLRDITPDRSKP--IEPLGSFKEDTCTERISSISSRYGKPD----LKPTRSRNGSR 172
Query: 308 IKP 310
+KP
Sbjct: 173 VKP 175
>At1g76770.1 68414.m08934 heat shock protein-related contains
similarity to 17.9 kDa heat-shock protein [Helianthus
annuus] gi|11990130|emb|CAB55634
Length = 244
Score = 33.9 bits (74), Expect = 0.32
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 254 EDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEP-AQIKDPNAIKPEG 312
ED T V P+++ K E+ DE E++ +P + + ++TEP +IK+ + E
Sbjct: 117 EDGTLTVTMPKKVKGITGLKIEEEDEEEEMKEPIVEEKTE-EKTEPEEEIKEETKPEEEN 175
Query: 313 WLDDEPEMIPDPSAVKPSDWDEEMDGTWEAALVDNP 348
+EP+ + V+ D E G E + D P
Sbjct: 176 EEAEEPQREEEEEVVEEGTRDHE--GKKEEEIEDKP 209
>At3g49190.1 68416.m05376 condensation domain-containing protein
contains Pfam profile PF00668: Condensation domain
Length = 522
Score = 33.1 bits (72), Expect = 0.56
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 402 HPFQMTPIHGVGFELWSMSPMLLFDNVLVTDDFALAERWAQQTFVLKKAKLSRDSKSLWG 461
HP +T IH + + M+ L+ D +++D L + W + +K A R+S LW
Sbjct: 441 HPHALT-IHCQSY-MNKMTITLIVDPTVISDPHRLCDDWEESLRSIKAAVTKRESLRLWD 498
Query: 462 RILRAMNYKPGW 473
LR ++ + W
Sbjct: 499 -YLRILHNRVAW 509
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 32.7 bits (71), Expect = 0.74
Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 261 NPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLDDEPEM 320
+P +E P KP+ +++ KP++ + EP + ++ +P +PE
Sbjct: 489 SPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEE 548
Query: 321 IPDPSAVKPSDWDEEMDGTWEAALVDNPACESAP---GCGQWAPPTVPNPNYKGIWRAPL 377
P P K E + + P E +P Q PP P
Sbjct: 549 SPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLESP 608
Query: 378 IPNPNYKGKWNPRRIPNP 395
+PN Y +R P P
Sbjct: 609 VPNDPYDASPIKKRRPQP 626
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 32.3 bits (70), Expect = 0.98
Identities = 60/304 (19%), Positives = 117/304 (38%), Gaps = 35/304 (11%)
Query: 26 ANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAKKQG-VDEN 84
A+ + D T E ++ ++ + E S+ + + DE K K + E K++G DE+
Sbjct: 915 ASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVKEKVTEKEIKERGGKDES 974
Query: 85 IAKYDGKWEIQQPIRKILKNDFGLVLTT----EAKHAAISTLLDKPFEFKNKPLIVQ--- 137
+ + + ++P R G +L T ++K ++S LD ++ +K L
Sbjct: 975 RIQVKDRKKCEEPPRA------GFILQTKRNKDSKLRSLSASLDSLLDYTDKDLDESSFE 1028
Query: 138 --------YEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTPYTIMFGPDKCGNDNK 189
YE+ + + ++K L + + RK H + + ++ + +K
Sbjct: 1029 ISLFAESLYEMLQYQMGSRIFEFLKKLRVKIVRQRNQRKRHQEE---LSVKQNEAKSQDK 1085
Query: 190 LHFIFRHKNPKNGTIEEK---HSKKPTQRLDDIYKDKEPHLYTLIVRPDNTFSILVDNKE 246
H++ + I E K T + + +E + + T +KE
Sbjct: 1086 RQKTAEHEDKEASVISESAPGKDDKETSGKETVDGSREIADKEAVAKTKETLG----SKE 1141
Query: 247 VNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPN 306
V G E V +E DD D PE+ E + DP +D +E E + +
Sbjct: 1142 VTVG---EAVNMEVENQDEEDDDGDDDPEEDPEEDPEEDPEEDPEEDPEECEEMDVANTE 1198
Query: 307 AIKP 310
+P
Sbjct: 1199 QEEP 1202
>At1g48250.1 68414.m05388 hypothetical protein
Length = 354
Score = 32.3 bits (70), Expect = 0.98
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 255 DFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQ 301
DF P N EE D ND + WDE +KI DP ++ +D D E A+
Sbjct: 282 DF-PEANGEEEASD-NDGGDDIWDE-DKIPDPLSSDDEDDDRVEAAR 325
>At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains Pfam profile PF00295: Polygalacturonase
(pectinase)
Length = 486
Score = 31.9 bits (69), Expect = 1.3
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 259 PVNPPEEIDDPNDKKPEDWDEREKIVDP-SATKPDDWDETEPAQIKDPNAIKPEGWLDDE 317
PV PP++++ P KP + + V P TKP A K P ++
Sbjct: 366 PVEPPQQVEPPTPTKPLAPAKPPRHVGPLMPTKPPTMFPKPLAPAKSPRHVELP-MPTKP 424
Query: 318 PEMIPDPSA-VKPSDWDEEMDGTWEAALVDNPACESAPGCGQWAPPTVPN 366
P M P P A KP E T + P + P +A P PN
Sbjct: 425 PTMFPKPLAPAKPPRHVEPPMPTKPPTMFPKPLAPAKPPV-YYAKPPAPN 473
>At4g20840.1 68417.m03024 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 539
Score = 31.9 bits (69), Expect = 1.3
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 43 DQYVSPELNSDNVYLSEHFDDENAFKRK--WIKSEAKKQGVDENIAKYDGKWEIQQPIRK 100
D V+P V+L + D N KRK ++ SE + G++ K + K
Sbjct: 354 DNRVNPTQIDPKVFLDRNLDRANFGKRKSDYVASEIPRDGIESLFKK-------MTELGK 406
Query: 101 ILKNDFGLVLTTEAKHAAISTLLDKPFEFKNKPLIVQYEVTMQE 144
I GLV A T+ PF ++K +QY VT QE
Sbjct: 407 I-----GLVFNPYGGKMAEVTVNATPFPHRSKLFKIQYSVTWQE 445
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 31.9 bits (69), Expect = 1.3
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 10/129 (7%)
Query: 201 NGTIEEKHSKKPTQRLDDIYKDKEPHLYTLIVRPDNTFSILVDNKEVNAGSLLEDFTPPV 260
NG + ++ + +P D ++K P T+ N + L + E+ E
Sbjct: 40 NGQVSKEAASEPAT---DQVQNKPPEPITMPSSKTNPETKLKPDLEIQPEEKKEKVLAEE 96
Query: 261 NPPEEIDDPNDKK-PEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLDDEPE 319
+ + + + ++ P + +RE +V P + KP+ E++ P KPE + +PE
Sbjct: 97 TKQKVVPEESKQEVPPEESKREVVVQPESAKPETKSESK------PETTKPETTSETKPE 150
Query: 320 MIPDPSAVK 328
+P K
Sbjct: 151 TKAEPQKPK 159
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 26 ANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDD--------ENAFKRKWIKSEAK 77
A + D+ D+ ++ EE+ ++ + S+ +H DD EN F K KS+ K
Sbjct: 42 AVQSDEEDKYSINTEEEKVVITGKKKSNKKVTQKHDDDDDFTEAVPENGFVGKKKKSKGK 101
Query: 78 KQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEAKHAA 118
+G + A GK E K+D ++ T K+A+
Sbjct: 102 NRGGSVSFALLSGKEETDDNESNGDKDDEPVISFTGKKNAS 142
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 31.5 bits (68), Expect = 1.7
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 36 TVEIEEDDQYVSPELNSDNVYL--SEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWE 93
T+E+E++D+ V ++ V L S+ + + K++++ K + K KW
Sbjct: 189 TIEVEDEDESVDKDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWR 248
Query: 94 IQQPIRKILKNDFGLVLTTEA 114
Q I IL +FG L T A
Sbjct: 249 KQNKIDSILGEEFGEDLATAA 269
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 256 FTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETE 298
F +N EIDD D+ +D DE E+ + + T D+ DE +
Sbjct: 107 FRLELNSRNEIDDDEDEDEDDGDEEEEDEEENLTVNDEEDEED 149
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 267 DDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNA-IKPEGWLDDEPEMIPDPS 325
++PN + D E + + +P+A D +E E A K+PNA +K +G + E + +
Sbjct: 811 EEPNAEPETDGKEHKSLKEPNAEPKSDGEEQEAA--KEPNAELKTDG---ENQEAAKELT 865
Query: 326 AVKPSDWDE 334
A + +D +E
Sbjct: 866 AERKTDEEE 874
>At5g19260.1 68418.m02293 expressed protein various predicted
proteins
Length = 288
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 23 LTNANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDENA-FKRKWIKSEAKKQGV 81
L ++NE +N+E T+E EE ++Y E ++ E EN R+ ++ + + +G+
Sbjct: 218 LKDSNEFVENEEETIEPEETEEYEEEEEEEEDEDEDEVMGIENVQVSRRCVQGDRENRGL 277
>At2g40020.1 68415.m04918 expressed protein
Length = 228
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 263 PEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDE 296
PEE DP +K+ E D +EK +P D DE
Sbjct: 161 PEEETDPEEKETEPEDPKEKETEPEEDSDGDDDE 194
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 254 EDFTPPVNPPEEIDDPNDKKPEDWDEREKIVD---PSATKPDDWDETEPAQIKDPNAIKP 310
E +P PP+ + P ++PE+ E K + P +KP+D +P Q K + KP
Sbjct: 429 EQPSPKPQPPKH-ESPKPEEPENKHELPKQKESPKPQPSKPED--SPKPEQPKPEESPKP 485
Query: 311 EGWLDDEPEMIPDPS-AVKPSDWDE--EMDGTWEAALVDNPACESAPGC--GQWAPPTVP 365
E +P+ IP+P+ V P + + D ++A+ V N P + PP P
Sbjct: 486 E-----QPQ-IPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPKVEDTRVPPPQPP 539
Query: 366 NPNYKGIWRAPLIPNPNYKGKWNPRRIPNPDYFKDDHPFQMTP 408
P +P P+P Y P P Y P +P
Sbjct: 540 MP-------SPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSP 575
>At5g55580.1 68418.m06929 mitochondrial transcription termination
factor family protein / mTERF family protein weak
similarity to mtDBP protein [Paracentrotus lividus]
GI:4584695; contains Pfam profile PF02536: mTERF
Length = 496
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 259 PVNPPEEIDDPNDKKPEDW---DEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLD 315
P + E+ DD +D +DW D+ ++ + KP +T + +KPE
Sbjct: 72 PYDSDEDDDDDDDDDDDDWLLNDDFAEVTEYEKKKPKSHKQTIAKKSVKKGIVKPEESET 131
Query: 316 DEPEMIPDPSAVKPSDWDEEMDGTW 340
DE ++ + P+ E+ +W
Sbjct: 132 DEDDL---DLGISPNATSEKKKESW 153
>At2g03500.1 68415.m00309 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 432
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 243 DNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDET 297
+N+ V +LE+F P N PE+ + K +W ++ S TKP + D T
Sbjct: 85 NNQSVGTRPVLEEFIPLRNQPEK----TNNKGSNWMTTAQLWSQSETKPKNIDST 135
>At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 702
Score = 29.9 bits (64), Expect = 5.2
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 254 EDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGW 313
ED PPE +++P ++K E+I D +E + K+ PE
Sbjct: 40 EDENCEQEPPENLNEPEEEKIS-----EEIDDDEPMSSHGMEENPQEEEKEREEENPEEL 94
Query: 314 LDDEPEMIPDPSAVKPSDW 332
D+E M P+ PS++
Sbjct: 95 DDEEQPMQPERMFFSPSEY 113
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 29.9 bits (64), Expect = 5.2
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 5/145 (3%)
Query: 210 KKPTQRLDDIYKDKEPHLYTLIVRPDNTFSILVDNKEVNAGSLLEDFTPPVNPPEEIDDP 269
K P DD + + + P T + N A + D P P E P
Sbjct: 92 KSPNIEQDDFTSSDDEDVPEAVPAPAPT--AVTANGNAGAAVVKADTKPKAKPAEV--KP 147
Query: 270 NDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPNAIKPEGWLDDEPEMIP-DPSAVK 328
++KPE +E E + + + DD ++ D + + E D+E E P P +
Sbjct: 148 AEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPIN 207
Query: 329 PSDWDEEMDGTWEAALVDNPACESA 353
+E + T + PA A
Sbjct: 208 KKRPNESVSKTPVSGKKAKPAAAPA 232
>At5g05520.1 68418.m00599 outer membrane OMP85 family protein
contains Pfam profile PF01103: outer membrane protein,
OMP85 family
Length = 524
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 299 PAQIKDPNAIKPEGWLDDEPEMIPDPSA--VKPSDWDEEMDG---TWEAALVDNPACES 352
PA+ DPN KP+ +DE E + D + + +++EE DG T E A+ D ES
Sbjct: 4 PAEKPDPNPSKPKIESEDEREELGDINGDEEEEEEYEEEDDGKPRTREDAIADRIKAES 62
>At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 479
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 301 QIKD-PNAIKPEGWLDDEPEMIPDPSAVKPSDWDEEMDGTWEA 342
Q KD P + E D+E E +PDP++V P+D+ WEA
Sbjct: 34 QDKDKPVKQRSEERCDEEEEQLPDPNSV-PTDFTSREAKVWEA 75
>At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 559
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 277 WDEREKIVDPSATKPDDWDETEPAQI-KDPNAIKPE----GWLDDEPEMIPDPSAVKPSD 331
W +R+K+ P + A++ KDPN + G D EPE++P PSD
Sbjct: 97 WCDRQKVDHPRPPDAAYVEGVVRARMDKDPNPSPGQSPGPGDKDPEPEILPPVEENSPSD 156
Query: 332 WDEEMD 337
+D M+
Sbjct: 157 YDAVME 162
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 29.5 bits (63), Expect = 6.9
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 243 DNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQI 302
D E L E+ EE D +KK E +E++K DP+ K D E E +I
Sbjct: 106 DRAEEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKK--DPTEEKKKDPAEEEELEI 163
Query: 303 K 303
K
Sbjct: 164 K 164
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 29.5 bits (63), Expect = 6.9
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 248 NAGS-LLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQIKDPN 306
NAG+ +++ T P P E+ P ++KPE +E E + + + DD ++ D +
Sbjct: 43 NAGAAVVKADTKPKAKPAEVK-PAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSD 101
Query: 307 AIKPEGWLDDEPEMIP-DPSAVKPSDWDEEMDGTWEAALVDNPACESA 353
+ E D+E E P P + +E + T + PA A
Sbjct: 102 DDEEEDSEDEEEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPA 149
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 6.9
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Query: 258 PPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPA-QIKDPNAIKPEGWLDD 316
PPV+PP P+ P D PS P D T P + P + P
Sbjct: 179 PPVSPPPPTPTPSVPSPPDVTPTPP--TPSVPSPPDVTPTPPTPSVPSPPDVTP---TPP 233
Query: 317 EPEMIPDPSAVKP 329
P +P PS P
Sbjct: 234 TPPSVPTPSGSPP 246
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 29.5 bits (63), Expect = 6.9
Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 255 DFTPPVNPPEEIDDPNDKKPEDWDEREKIVDP---SATKPDDWDETEPAQIKDPNAIKPE 311
D +PP PP+ P+ P D IV P + P+ + P ++ +P P
Sbjct: 74 DSSPPP-PPDLTPPPSSPPPPDAPPPIPIVFPPPIDSPPPESTNSPPPPEVFEPPP--PP 130
Query: 312 GWLDDEPEMIPDPSAVKPS----DWDEEMDGTWEAALVDNPACESAPGCGQWAPPTVPNP 367
D+ P P P + P + +P SAP APP P
Sbjct: 131 ADEDESPPAPPPPEQLPPPASSPQGGPKKPKKHHPGPATSPPAPSAPATSPPAPPNAPPR 190
Query: 368 N 368
N
Sbjct: 191 N 191
>At1g64500.1 68414.m07312 glutaredoxin family protein
Length = 368
Score = 29.5 bits (63), Expect = 6.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 264 EEIDDPNDKKPEDWDEREKIVD----PSATKPDDWDETEP 299
++ DD D P+ W+E K ++ P+A KP + D +P
Sbjct: 62 DDDDDDGDDAPKTWEEVSKSLETKLKPAAVKPPEVDSVKP 101
>At5g45010.1 68418.m05519 DSS1/SEM1 family protein contains Pfam
profile PF05160: DSS1/SEM1 family
Length = 73
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 275 EDWDEREKIVDPSATKPDDWDETE 298
EDW E+E++ + S DDWD+ +
Sbjct: 30 EDWLEKEEVKEVSLQWEDDWDDDD 53
>At1g64750.2 68414.m07342 DSS1/SEM1 family protein contains Pfam
profile PF05160: DSS1/SEM1 family
Length = 74
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 275 EDWDEREKIVDPSATKPDDWDETE 298
EDW E+E++ + S DDWD+ +
Sbjct: 31 EDWLEKEEVKEVSQQWEDDWDDDD 54
>At1g64750.1 68414.m07341 DSS1/SEM1 family protein contains Pfam
profile PF05160: DSS1/SEM1 family
Length = 74
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 275 EDWDEREKIVDPSATKPDDWDETE 298
EDW E+E++ + S DDWD+ +
Sbjct: 31 EDWLEKEEVKEVSQQWEDDWDDDD 54
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 29.1 bits (62), Expect = 9.1
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 243 DNKEVNAGSLLEDFTPPVNPPEEIDDPNDKKPEDWDEREKIVDPSATKPDDWDETEPAQI 302
++ ++ S E F P EE D D+K E DE + + D+ E
Sbjct: 13 EDDQLGRNSEAERFNPEAVEKEEDPDKMDEKDESGDEEDDVKRDQVEAEDEEALGEEEDS 72
Query: 303 KDPNAIKPEGWLDDEPEMIPD 323
K+ + G L + M+ D
Sbjct: 73 KERSQSSSAGELSESEYMVVD 93
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.135 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,888
Number of Sequences: 28952
Number of extensions: 828162
Number of successful extensions: 1750
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 61
length of query: 617
length of database: 12,070,560
effective HSP length: 85
effective length of query: 532
effective length of database: 9,609,640
effective search space: 5112328480
effective search space used: 5112328480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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