Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001095-TA|BGIBMGA001095-PA|undefined
         (63 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   0.95 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   2.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    19   2.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   2.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    19   2.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    19   3.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    19   3.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         19   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   5.1  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 0.95
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 31 KAQNRRGQSDDPVEQLERARRFIVHL 56
          K+  R+GQ+   +  LE A ++  HL
Sbjct: 33 KSHFRQGQAKFEITDLEPALQYCTHL 58


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
          protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 7/31 (22%), Positives = 15/31 (48%)

Query: 31 KAQNRRGQSDDPVEQLERARRFIVHLERVWD 61
          +AQ  +G  +DP +   +      + +R W+
Sbjct: 17 RAQQLKGNQEDPCKLKSKVVGDETYCDRYWE 47


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 25  KTQTGDKAQNRRGQSDDPVEQLERARRFIVH 55
           K +TGD+ Q+      D   +   AR F+++
Sbjct: 298 KLKTGDEIQDLISTIKDNFPRFYAARFFVIN 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 25  KTQTGDKAQNRRGQSDDPVEQLERARRFIVH 55
           K +TGD+ Q+      D   +   AR F+++
Sbjct: 298 KLKTGDEIQDLISTIKDNFPRFYAARFFVIN 328


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 6   NTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVH 55
           N++ L+ R+ K   +    K +   K +    Q D P+      ++ I+H
Sbjct: 191 NSLGLSERQVKIWFQNRRAKERKQVKKREEVTQKDSPMNMGHLTQQQIIH 240


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
          growth factor 4 protein.
          Length = 431

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 31 KAQNRRGQSDDPVEQLERARRFIVHL 56
          KA  R GQ    V  ++ A +F  HL
Sbjct: 28 KAYFRDGQGKFDVNFIDPALQFCTHL 53


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 13  REGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARR 51
           RE   +++  T    T +       Q+D P+E++  A +
Sbjct: 153 REAVQEERQRTKDRDTSEVESTSNLQADMPLERIIEAEK 191


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)

Query: 8   IQLNNREGKAQK-KIETGKTQ 27
           ++  + E K  K KI TGKTQ
Sbjct: 171 LEKTSEELKIPKAKINTGKTQ 191


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 8   IQLNNREGKAQKKIETGKTQTGDKAQNRRGQ 38
           + LN+       K E  K+ T DKAQ   G+
Sbjct: 835 VPLNSTPRSTPDKRE--KSPTSDKAQEADGE 863


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.128    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,745
Number of Sequences: 317
Number of extensions: 345
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 63
length of database: 114,650
effective HSP length: 43
effective length of query: 20
effective length of database: 101,019
effective search space:  2020380
effective search space used:  2020380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.2 bits)
S2: 34 (17.8 bits)