Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001095-TA|BGIBMGA001095-PA|undefined
(63 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 27 1.2
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 27 2.2
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 27 2.2
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 27 2.2
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 27 2.2
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 26 2.9
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 26 3.8
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 25 5.0
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 25 5.0
U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical pr... 25 6.6
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 27.5 bits (58), Expect = 1.2
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 4 ENNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLER 48
E N + + N++ +AQ+K+ + K + +K + ++ +E L +
Sbjct: 145 EENVVDMKNKKAEAQEKLHSEKKEYDEKKLQKSEENALKIEDLHK 189
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 5 NNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDP 42
+ TI +N+ K + KI+T KT T R+ S DP
Sbjct: 420 DTTISVNDVVDKFRCKIDTVKTNTRSDVPTRKHYSRDP 457
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 5 NNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDP 42
+ TI +N+ K + KI+T KT T R+ S DP
Sbjct: 425 DTTISVNDVVDKFRCKIDTVKTNTRSDVPTRKHYSRDP 462
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 2 NAENNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARR 51
N E + + +K E K Q + ++RR Q D+P EQ+ R
Sbjct: 1515 NYEREMFEKEENFQRIEKNQEEEKDQEMNYEESRREQDDEPTEQVAIVER 1564
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 2 NAENNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARR 51
N E + + +K E K Q + ++RR Q D+P EQ+ R
Sbjct: 1515 NYEREMFEKEENFQRIEKNQEEEKDQEMNYEESRREQDDEPTEQVAIVER 1564
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 2 NAENNTIQLNNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARR 51
N E + + +K E K Q + ++RR Q D+P EQ+ R
Sbjct: 1515 NYEREMFEKEENFQRIEKNQEEEKDQEMNYEESRREQDDEPTEQVAIVER 1564
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 26.2 bits (55), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 1 MNAENNTIQLNNREGKAQK--KIETGKTQTGDKAQNRRGQSDDPV 43
MN E Q +E +AQK + ET + + D + SD PV
Sbjct: 319 MNEEEQRRQAEEKEAQAQKQKEFETDRKRIADDLHGKAQISDKPV 363
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 26 TQTGDKAQNR-RGQSDDPVEQLERARRFIVHLERVWDVP 63
T TG + + R RG DD E L+R + I +E+ +P
Sbjct: 560 TDTGRRGRRRGRGSDDDEDELLQRDLKLIEEMEKGVKLP 598
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 25 KTQTGDKAQNRRGQSDDPVEQLERARR 51
+T TG +A++ R SD ++ E ARR
Sbjct: 300 RTSTGGQAKDVRSDSDSDYDEEEMARR 326
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 25 KTQTGDKAQNRRGQSDDPVEQLERARR 51
+T TG +A++ R SD ++ E ARR
Sbjct: 300 RTSTGGQAKDVRSDSDSDYDEEEMARR 326
>U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical
protein F26A1.3 protein.
Length = 512
Score = 25.0 bits (52), Expect = 6.6
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 11 NNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARRFI 53
++RE K KK KT T K+++ +GQS PVE E+ + FI
Sbjct: 31 DDRETKTSKK----KT-TKPKSKSNKGQSPAPVES-EKDKSFI 67
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,561,516
Number of Sequences: 27539
Number of extensions: 49270
Number of successful extensions: 171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 163
Number of HSP's gapped (non-prelim): 11
length of query: 63
length of database: 12,573,161
effective HSP length: 43
effective length of query: 20
effective length of database: 11,388,984
effective search space: 227779680
effective search space used: 227779680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)
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