Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001095-TA|BGIBMGA001095-PA|undefined
(63 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 29 0.47
01_01_0858 - 6699126-6699128,6699219-6699318,6700052-6700278,670... 29 0.62
06_01_1077 - 8796951-8797097,8797185-8797442,8797541-8797812,879... 27 1.4
06_03_1333 - 29410014-29410052,29410071-29410322,29410601-294106... 27 1.9
07_01_1208 + 11529105-11529449,11530026-11530040 27 2.5
05_01_0352 - 2759633-2760166,2760181-2760228,2760843-2760950 27 2.5
11_03_0191 - 11366831-11367676 26 3.3
02_04_0527 + 23684219-23684380,23684520-23684592,23686026-236861... 26 3.3
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 26 4.4
06_03_1331 - 29389159-29390300,29390415-29390822,29390930-29391413 26 4.4
02_01_0254 - 1669461-1669590,1669833-1672318 26 4.4
11_02_0150 - 8816714-8817806,8817993-8818126 25 5.8
05_01_0353 + 2765112-2765156,2765432-2766250 25 5.8
04_04_0530 + 26024931-26025923 25 5.8
12_02_0292 + 16979550-16980662,16983249-16983731 25 7.6
11_04_0220 + 14991666-14992892 25 7.6
11_04_0061 + 13013963-13014070,13015228-13015422,13017927-130180... 25 7.6
09_02_0125 + 4554786-4556012 25 7.6
07_03_0614 - 19974200-19975426 25 7.6
07_03_0416 - 17962740-17963009,17963076-17963732 25 7.6
07_02_0011 + 11753791-11753923,11754178-11754269,11757396-117576... 25 7.6
07_01_0390 + 2931331-2932299 25 7.6
05_04_0349 + 20492334-20492494,20493245-20493324,20493951-204940... 25 7.6
04_01_0230 - 2921845-2922690 25 7.6
03_06_0425 - 33847906-33848892 25 7.6
03_05_0480 + 24740567-24741559 25 7.6
03_05_0308 - 22977542-22978174,22978202-22978387 25 7.6
02_05_0205 + 26755024-26756217 25 7.6
02_04_0176 + 20658610-20659836 25 7.6
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 25 7.6
01_05_0169 + 18874799-18875057,18875103-18875338 25 7.6
01_03_0193 - 13638685-13638980,13639954-13640068 25 7.6
01_02_0066 + 10785843-10786835 25 7.6
>02_05_0101 - 25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 29.1 bits (62), Expect = 0.47
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 24 GKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLERVW 60
GK + G KAQNRR + D V+ +R ++ W
Sbjct: 1974 GKGKEGAKAQNRRARKDFNVQPTSHKKRIEPSIDPTW 2010
>01_01_0858 -
6699126-6699128,6699219-6699318,6700052-6700278,
6701032-6701188,6701422-6701522,6702147-6702251
Length = 230
Score = 28.7 bits (61), Expect = 0.62
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 1 MNAENNTIQL----NNREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHL 56
+ AE I+L N ++G +KKIE K + + + Q D + LE A + ++++
Sbjct: 45 VEAEKKRIRLEFERNEKQGDIKKKIEYSKQLNASRLEVLQAQDDLAMSMLEAAGKELLYI 104
Query: 57 ER 58
R
Sbjct: 105 TR 106
>06_01_1077 -
8796951-8797097,8797185-8797442,8797541-8797812,
8797907-8797967,8798082-8798159,8798380-8798439,
8798543-8798629,8798717-8798941,8799003-8799091,
8799137-8799251
Length = 463
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 12 NREGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLER 58
++E + +K++ Q + A+ R + ++QLE +R ++HLE+
Sbjct: 164 SKERRGDQKMQRRLAQNREAARKSRMRKKAYIQQLESSRSKLMHLEQ 210
>06_03_1333 -
29410014-29410052,29410071-29410322,29410601-29410633,
29411035-29411045,29411420-29415325,29415437-29415920
Length = 1574
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/30 (30%), Positives = 20/30 (66%)
Query: 33 QNRRGQSDDPVEQLERARRFIVHLERVWDV 62
+ G DD +EQ +++RF++ L+ +W++
Sbjct: 351 EENSGWPDDLIEQRLKSKRFLLVLDDIWNL 380
>07_01_1208 + 11529105-11529449,11530026-11530040
Length = 119
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 9 QLNNREGKAQKKIETGKT--QTGDKAQNRRGQSDDPVEQLERARRFIV 54
Q R G+ ++++ + QT D+A +R G VEQ + RR ++
Sbjct: 63 QGTGRPGRQEEEVVAPREEKQTKDEAASRSGHGGGSVEQQQNQRRIVM 110
>05_01_0352 - 2759633-2760166,2760181-2760228,2760843-2760950
Length = 229
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 21 IETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLERVW 60
+E +T G A RRG++ PV+ ++ F +H + W
Sbjct: 63 VEPVRTLEGLMAAERRGEAAAPVDDMDWEDIFYLHDDNQW 102
>11_03_0191 - 11366831-11367676
Length = 281
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + + Q D+ +RRG D EQL ++ + LE
Sbjct: 62 KAQLQVHSDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 104
>02_04_0527 +
23684219-23684380,23684520-23684592,23686026-23686115,
23686238-23686302
Length = 129
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 4 ENNTIQLNNREGKAQKKIETGKTQTGDK 31
+N+ +Q+ +GK +KK + K T DK
Sbjct: 96 KNSRVQIKRLKGKGRKKAKNAKPPTKDK 123
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 14 EGKAQKKIETGKTQTGDKAQNRRGQSDDPVEQLERAR-RFIVHL 56
E ++KK+ETGK++ + + RR + + +E+ R +F +H+
Sbjct: 90 EDDSEKKVETGKSEDSEVVR-RRKEVEREIERAAILRKKFDIHI 132
>06_03_1331 - 29389159-29390300,29390415-29390822,29390930-29391413
Length = 677
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 35 RRGQSDDPVEQLERARRFIVHLERVWD 61
+ G DD +EQ +++RF++ L+ +W+
Sbjct: 311 KSGGPDDLIEQRLKSKRFLLVLDDMWN 337
>02_01_0254 - 1669461-1669590,1669833-1672318
Length = 871
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 16 KAQKKIETGKTQTGDKAQNRRGQSDD 41
K K+++TG Q G+ +N++ Q+DD
Sbjct: 838 KITKRVKTGWGQRGNVYENKQQQNDD 863
>11_02_0150 - 8816714-8817806,8817993-8818126
Length = 408
Score = 25.4 bits (53), Expect = 5.8
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 31 KAQNRRGQSDDPVEQLERARRFIVHLERVW 60
+ G ++D +EQ +++RF++ L+ +W
Sbjct: 282 EVDGENGTAEDHIEQRLKSKRFLLILDDMW 311
>05_01_0353 + 2765112-2765156,2765432-2766250
Length = 287
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 22 ETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLERVW 60
E +T G A RRG++ PV+ ++ F +H + W
Sbjct: 48 EPVRTLEGLMAAERRGEAAAPVDDMDWEDIFYLHDDNQW 86
>04_04_0530 + 26024931-26025923
Length = 330
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 111 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVCQLE 153
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 189 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 231
>11_04_0220 + 14991666-14992892
Length = 408
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 189 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 231
>11_04_0061 +
13013963-13014070,13015228-13015422,13017927-13018046,
13018377-13019015
Length = 353
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 176 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 218
>09_02_0125 + 4554786-4556012
Length = 408
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 189 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 231
>07_03_0614 - 19974200-19975426
Length = 408
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 189 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 231
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 111 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 153
>07_02_0011 +
11753791-11753923,11754178-11754269,11757396-11757689,
11757801-11758622
Length = 446
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 227 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 269
>07_01_0390 + 2931331-2932299
Length = 322
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 111 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 153
>05_04_0349 +
20492334-20492494,20493245-20493324,20493951-20494020,
20494089-20494139,20494535-20494649,20495401-20496268,
20496453-20496628,20500217-20500276,20501617-20501694,
20501951-20502008,20502658-20502720,20503397-20503453,
20503599-20503661,20504081-20504454
Length = 757
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 IQLNNREGKAQKK--IETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLERVWDVP 63
I++ N +G K ++ K+ +G+K + +G +D P LE+ + + D+P
Sbjct: 566 IEMANEKGTNSNKDRVDCLKSCSGEKLKGSKGDADAPGTCLEKVITKAIEVNPPGDMP 623
>04_01_0230 - 2921845-2922690
Length = 281
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 62 KAQLQVHGDQFQQLSDQYNDRRGMMDSLEEQLRESQEHVNQLE 104
>03_06_0425 - 33847906-33848892
Length = 328
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 109 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 151
>03_05_0480 + 24740567-24741559
Length = 330
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 111 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 153
>03_05_0308 - 22977542-22978174,22978202-22978387
Length = 272
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 27 QTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
Q D+ +RRG D EQL +++ + LE
Sbjct: 65 QLSDQYNDRRGMMDTLEEQLRKSQEHVSQLE 95
>02_05_0205 + 26755024-26756217
Length = 397
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 178 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 220
>02_04_0176 + 20658610-20659836
Length = 408
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 189 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 231
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 4 ENNTIQLNNREGK--AQKKIETGKTQTGDKAQNRRGQSDDPVEQLERARRFIVHLER 58
++++ L R G A K TG T+ K + + +SD+ +RAR ++ +++
Sbjct: 64 KHHSSPLKRRRGSDAATGKSATGPTRRKHKQKRKNDESDEVSRMEKRARYLLIKIKQ 120
>01_05_0169 + 18874799-18875057,18875103-18875338
Length = 164
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 2 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 44
>01_03_0193 - 13638685-13638980,13639954-13640068
Length = 136
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 10 LNNREGKAQKKIETGKTQTGDKAQNRRGQSD 40
+ EG+A+ +T G K + RRGQ D
Sbjct: 83 VGRHEGEARAPRTVARTTGGHKGEARRGQRD 113
>01_02_0066 + 10785843-10786835
Length = 330
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 16 KAQKKIETGK-TQTGDKAQNRRGQSDDPVEQLERARRFIVHLE 57
KAQ ++ + Q D+ +RRG D EQL ++ + LE
Sbjct: 111 KAQLQVHGDQFQQLSDQYNDRRGMMDTLEEQLRESQEHVSQLE 153
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,741,812
Number of Sequences: 37544
Number of extensions: 51166
Number of successful extensions: 173
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 160
Number of HSP's gapped (non-prelim): 33
length of query: 63
length of database: 14,793,348
effective HSP length: 43
effective length of query: 20
effective length of database: 13,178,956
effective search space: 263579120
effective search space used: 263579120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -