GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001094-TA|BGIBMGA001094-PA|undefined
         (77 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   1.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   5.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    19   5.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     19   5.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       19   5.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   7.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 8/31 (25%)

Query: 43  WLVYMPHGNVANWVVWIGWETGFKGKYNVIY 73
           W++  P G+         +E GF+  YN++Y
Sbjct: 314 WIIVAPAGS--------NFEIGFENYYNILY 336


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 5/10 (50%), Positives = 7/10 (70%)

Query: 57  VWIGWETGFK 66
           +W+ WE G K
Sbjct: 383 LWLSWEEGMK 392


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory
          receptor candidate 46 protein.
          Length = 1451

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 21 FGFITSVDGRSNAR 34
          FGF+T    RSN R
Sbjct: 24 FGFVTFTCTRSNFR 37


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory
          receptor candidate 3 protein.
          Length = 398

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 21 FGFITSVDGRSNAR 34
          FGF+T    RSN R
Sbjct: 42 FGFVTFTCTRSNFR 55


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 6  YGDERGRFGAHFPFN 20
          Y  E G  GA FP +
Sbjct: 71 YPYENGHMGAEFPLD 85


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 7   GDERGRFGAHFPFNFG 22
           GD+  R   HF  +FG
Sbjct: 86  GDKHDRHERHFESSFG 101


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 51  NVANWVVWIGWETGFKGKYNVIYLLS 76
           NVAN+    GW   F     V+ LLS
Sbjct: 166 NVANFNKIFGWSLIFLFGRIVLQLLS 191


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.146    0.510 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,177
Number of Sequences: 317
Number of extensions: 925
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 77
length of database: 114,650
effective HSP length: 46
effective length of query: 31
effective length of database: 100,068
effective search space:  3102108
effective search space used:  3102108
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.8 bits)
S2: 36 (18.6 bits)