GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001094-TA|BGIBMGA001094-PA|undefined
         (77 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    58   1e-11
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    58   1e-11
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    49   6e-09
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    45   9e-08
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   1.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   5.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   9.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         19   9.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    19   9.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    19   9.4  

>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 58.4 bits (135), Expect = 1e-11
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 1   MTMLYYGDERGRFGAHFPFNFGFITSVDGRSNARDFVYVIKQWLVYMPHGNVANWV 56
           MTM YY      +GA FPFNF FI +V   SN+ DF  +I  W+ YMP   + NWV
Sbjct: 293 MTMKYYD-----YGADFPFNFAFIKNVSRDSNSSDFKKLIDNWMTYMPPSGIPNWV 343


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 58.0 bits (134), Expect = 1e-11
 Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 1   MTMLYYGDERGRFGAHFPFNFGFITSVDGRSNARDFVYVIKQWLVYMPHGNVANWV 56
           MTM YY      +GA FPFNF FI +V   SN+ DF  ++  W+ YMP   + NWV
Sbjct: 293 MTMKYYD-----YGADFPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPSGIPNWV 343


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 49.2 bits (112), Expect = 6e-09
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)

Query: 1   MTMLYYGDERGRFGAHFPFNFGFITSVDGRSNARDFVYVIKQWLVYMPHGNVANWV 56
           +T+ YY     + G+  PFNF FI  ++ +S A DF  +I +W+  +P+G+V NWV
Sbjct: 299 LTIKYY-----KSGSTVPFNFMFIADLNNQSTASDFKQLIDRWVANVPNGSVTNWV 349


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 45.2 bits (102), Expect = 9e-08
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 14  GAHFPFNFGFITSVDGRSNARDFVYVIKQWLVYMPHGNVANWVV 57
           G++ PFNF FIT  +  S    F  +I  W+   P  NV NWV+
Sbjct: 314 GSNVPFNFKFITDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVM 357


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 1.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)

Query: 57  VWIGWETGFK 66
           +WI WE G K
Sbjct: 387 LWISWEEGMK 396


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
          opsin protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 5/14 (35%), Positives = 10/14 (71%)

Query: 33 ARDFVYVIKQWLVY 46
          A + +++ + WLVY
Sbjct: 27 AEELIHIPEHWLVY 40


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 2   TMLYYGDERG 11
           TM+Y  DE+G
Sbjct: 204 TMVYIADEKG 213


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 2   TMLYYGDERG 11
           TM+Y  DE+G
Sbjct: 201 TMVYIADEKG 210


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 2   TMLYYGDERG 11
           TM+Y  DE+G
Sbjct: 201 TMVYIADEKG 210


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 2   TMLYYGDERG 11
           TM+Y  DE+G
Sbjct: 201 TMVYIADEKG 210


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.146    0.510 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,181
Number of Sequences: 429
Number of extensions: 886
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 77
length of database: 140,377
effective HSP length: 46
effective length of query: 31
effective length of database: 120,643
effective search space:  3739933
effective search space used:  3739933
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.8 bits)
S2: 36 (18.6 bits)