Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001093-TA|BGIBMGA001093-PA|IPR003698|Lipoate synthase,
IPR007197|Radical SAM, IPR006638|Elongator protein 3/MiaB/NifB
(366 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003750-1|AAO41414.1| 380|Drosophila melanogaster RH26374p pro... 535 e-152
AY058557-1|AAL13786.1| 380|Drosophila melanogaster LD24887p pro... 535 e-152
AE014296-3361|AAF51596.1| 380|Drosophila melanogaster CG5231-PA... 535 e-152
AE014296-3362|AAN12131.1| 190|Drosophila melanogaster CG5231-PB... 247 2e-65
BT004901-1|AAO47879.1| 483|Drosophila melanogaster LD07439p pro... 32 1.4
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 32 1.4
AF068758-1|AAC79684.1| 823|Drosophila melanogaster SIR2 protein. 32 1.4
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 32 1.4
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 32 1.4
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 32 1.4
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 32 1.4
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 32 1.4
AE014134-2285|AAF53248.1| 823|Drosophila melanogaster CG5216-PA... 32 1.4
>BT003750-1|AAO41414.1| 380|Drosophila melanogaster RH26374p
protein.
Length = 380
Score = 535 bits (1320), Expect = e-152
Identities = 245/343 (71%), Positives = 283/343 (82%), Gaps = 2/343 (0%)
Query: 22 HSNKLDAIREKLKEGPNLTDFISE-DRPKN-WDEYQGKLKREKGESERLRLPPWLKTTIP 79
++ KL+ IRE+L +GPN DF+ D +N W++Y GKL+REKGE +RLRLPPWLKTTIP
Sbjct: 26 NAEKLEEIRERLAKGPNFHDFVQNPDNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIP 85
Query: 80 TGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCS 139
G + +IK Q+R LKLSTVCEEARCPNIGECW GG+HG TATIMLMGDTCTRGC FCS
Sbjct: 86 VGKNYAKIKAQMRELKLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCTRGCRFCS 145
Query: 140 VKTSRNPPPLDPEEPRNTAHAINHWGVGYIVLTSVDRDDLPDGGSLHFAETVKEIKKLNK 199
VKT+R PPPLD EP NTA AI WG+ YIVLTSVDRDDLPDGGS H AETV+EIK N
Sbjct: 146 VKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDRDDLPDGGSEHIAETVREIKARNS 205
Query: 200 DILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYRQTLKVLQMA 259
+I VECLVPDFR CV +A+SGLDV+AHN+ETVE+LTP+VRD RA YRQTL+VL A
Sbjct: 206 NIFVECLVPDFRGNLECVKTIANSGLDVYAHNIETVEKLTPYVRDRRAHYRQTLQVLTEA 265
Query: 260 KEINPDLITKSSIMLGLGETDAQVEQTMKDLREAGVDCVTLGQYMQPTKKHLKVFEYVTP 319
K NP+LITKSSIMLGLGETD ++E T+KDLREAGVDCVTLGQYMQPT KHLKV EYVTP
Sbjct: 266 KRFNPNLITKSSIMLGLGETDEEIENTLKDLREAGVDCVTLGQYMQPTNKHLKVIEYVTP 325
Query: 320 ARFQQWEARGRQLGFLYVASGALVRSSYRAGEFFISAVLRDRK 362
+F+ WE RG +LGFLY ASG LVRSSY+AGEFFI+++L +RK
Sbjct: 326 EKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRK 368
>AY058557-1|AAL13786.1| 380|Drosophila melanogaster LD24887p
protein.
Length = 380
Score = 535 bits (1320), Expect = e-152
Identities = 245/343 (71%), Positives = 283/343 (82%), Gaps = 2/343 (0%)
Query: 22 HSNKLDAIREKLKEGPNLTDFISE-DRPKN-WDEYQGKLKREKGESERLRLPPWLKTTIP 79
++ KL+ IRE+L +GPN DF+ D +N W++Y GKL+REKGE +RLRLPPWLKTTIP
Sbjct: 26 NAEKLEEIRERLAKGPNFHDFVQNPDNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIP 85
Query: 80 TGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCS 139
G + +IK Q+R LKLSTVCEEARCPNIGECW GG+HG TATIMLMGDTCTRGC FCS
Sbjct: 86 VGKNYAKIKAQMRELKLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCTRGCRFCS 145
Query: 140 VKTSRNPPPLDPEEPRNTAHAINHWGVGYIVLTSVDRDDLPDGGSLHFAETVKEIKKLNK 199
VKT+R PPPLD EP NTA AI WG+ YIVLTSVDRDDLPDGGS H AETV+EIK N
Sbjct: 146 VKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDRDDLPDGGSEHIAETVREIKARNS 205
Query: 200 DILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYRQTLKVLQMA 259
+I VECLVPDFR CV +A+SGLDV+AHN+ETVE+LTP+VRD RA YRQTL+VL A
Sbjct: 206 NIFVECLVPDFRGNLECVKTIANSGLDVYAHNIETVEKLTPYVRDRRAHYRQTLQVLTEA 265
Query: 260 KEINPDLITKSSIMLGLGETDAQVEQTMKDLREAGVDCVTLGQYMQPTKKHLKVFEYVTP 319
K NP+LITKSSIMLGLGETD ++E T+KDLREAGVDCVTLGQYMQPT KHLKV EYVTP
Sbjct: 266 KRFNPNLITKSSIMLGLGETDEEIENTLKDLREAGVDCVTLGQYMQPTNKHLKVIEYVTP 325
Query: 320 ARFQQWEARGRQLGFLYVASGALVRSSYRAGEFFISAVLRDRK 362
+F+ WE RG +LGFLY ASG LVRSSY+AGEFFI+++L +RK
Sbjct: 326 EKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRK 368
>AE014296-3361|AAF51596.1| 380|Drosophila melanogaster CG5231-PA,
isoform A protein.
Length = 380
Score = 535 bits (1320), Expect = e-152
Identities = 245/343 (71%), Positives = 283/343 (82%), Gaps = 2/343 (0%)
Query: 22 HSNKLDAIREKLKEGPNLTDFISE-DRPKN-WDEYQGKLKREKGESERLRLPPWLKTTIP 79
++ KL+ IRE+L +GPN DF+ D +N W++Y GKL+REKGE +RLRLPPWLKTTIP
Sbjct: 26 NAEKLEEIRERLAKGPNFHDFVQNPDNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIP 85
Query: 80 TGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCS 139
G + +IK Q+R LKLSTVCEEARCPNIGECW GG+HG TATIMLMGDTCTRGC FCS
Sbjct: 86 VGKNYAKIKAQMRELKLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCTRGCRFCS 145
Query: 140 VKTSRNPPPLDPEEPRNTAHAINHWGVGYIVLTSVDRDDLPDGGSLHFAETVKEIKKLNK 199
VKT+R PPPLD EP NTA AI WG+ YIVLTSVDRDDLPDGGS H AETV+EIK N
Sbjct: 146 VKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDRDDLPDGGSEHIAETVREIKARNS 205
Query: 200 DILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYRQTLKVLQMA 259
+I VECLVPDFR CV +A+SGLDV+AHN+ETVE+LTP+VRD RA YRQTL+VL A
Sbjct: 206 NIFVECLVPDFRGNLECVKTIANSGLDVYAHNIETVEKLTPYVRDRRAHYRQTLQVLTEA 265
Query: 260 KEINPDLITKSSIMLGLGETDAQVEQTMKDLREAGVDCVTLGQYMQPTKKHLKVFEYVTP 319
K NP+LITKSSIMLGLGETD ++E T+KDLREAGVDCVTLGQYMQPT KHLKV EYVTP
Sbjct: 266 KRFNPNLITKSSIMLGLGETDEEIENTLKDLREAGVDCVTLGQYMQPTNKHLKVIEYVTP 325
Query: 320 ARFQQWEARGRQLGFLYVASGALVRSSYRAGEFFISAVLRDRK 362
+F+ WE RG +LGFLY ASG LVRSSY+AGEFFI+++L +RK
Sbjct: 326 EKFKHWEERGNELGFLYTASGPLVRSSYKAGEFFITSILENRK 368
>AE014296-3362|AAN12131.1| 190|Drosophila melanogaster CG5231-PB,
isoform B protein.
Length = 190
Score = 247 bits (604), Expect = 2e-65
Identities = 110/158 (69%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
Query: 22 HSNKLDAIREKLKEGPNLTDFISE-DRPKN-WDEYQGKLKREKGESERLRLPPWLKTTIP 79
++ KL+ IRE+L +GPN DF+ D +N W++Y GKL+REKGE +RLRLPPWLKTTIP
Sbjct: 26 NAEKLEEIRERLAKGPNFHDFVQNPDNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIP 85
Query: 80 TGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCS 139
G + +IK Q+R LKLSTVCEEARCPNIGECW GG+HG TATIMLMGDTCTRGC FCS
Sbjct: 86 VGKNYAKIKAQMRELKLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCTRGCRFCS 145
Query: 140 VKTSRNPPPLDPEEPRNTAHAINHWGVGYIVLTSVDRD 177
VKT+R PPPLD EP NTA AI WG+ YIVLTSVDRD
Sbjct: 146 VKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDRD 183
>BT004901-1|AAO47879.1| 483|Drosophila melanogaster LD07439p
protein.
Length = 483
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 201 ILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYR 250
+ V C +PDFR+ G AR+A D+ + + + + F RDPR Y+
Sbjct: 232 VSVSCGIPDFRSTNGIYARLAHDFPDL--PDPQAMFDINYFKRDPRPFYK 279
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1168 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1218
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1219 TEIQQSLQELQDSVKQKEELVQNLEE 1244
>AF068758-1|AAC79684.1| 823|Drosophila melanogaster SIR2 protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 201 ILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYR 250
+ V C +PDFR+ G AR+A D+ + + + + F RDPR Y+
Sbjct: 230 VSVSCGIPDFRSTNGIYARLAHDFPDL--PDPQAMFDINYFKRDPRPFYK 277
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1169 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1219
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1220 TEIQQSLQELQDSVKQKEELVQNLEE 1245
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1131 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1181
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1182 TEIQQSLQELQDSVKQKEELVQNLEE 1207
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1156 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1206
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1207 TEIQQSLQELQDSVKQKEELVQNLEE 1232
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1168 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1218
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1219 TEIQQSLQELQDSVKQKEELVQNLEE 1244
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 25 KLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGSKF 84
K+ I+E+LKE T ++R K ++E + KLK+ + ++L+ + + + K
Sbjct: 1169 KVTGIKEELKE----THLQLDERQKKFEELEEKLKQAQQSEQKLQ-----QESQTSKEKL 1219
Query: 85 NEIKQQLRSLKLSTVCEEARCPNIGE 110
EI+Q L+ L+ S +E N+ E
Sbjct: 1220 TEIQQSLQELQDSVKQKEELVQNLEE 1245
>AE014134-2285|AAF53248.1| 823|Drosophila melanogaster CG5216-PA
protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 201 ILVECLVPDFRAVRGCVARVASSGLDVFAHNVETVERLTPFVRDPRAGYR 250
+ V C +PDFR+ G AR+A D+ + + + + F RDPR Y+
Sbjct: 232 VSVSCGIPDFRSTNGIYARLAHDFPDL--PDPQAMFDINYFKRDPRPFYK 279
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,379,830
Number of Sequences: 52641
Number of extensions: 787774
Number of successful extensions: 2001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1993
Number of HSP's gapped (non-prelim): 13
length of query: 366
length of database: 24,830,863
effective HSP length: 86
effective length of query: 280
effective length of database: 20,303,737
effective search space: 5685046360
effective search space used: 5685046360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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