Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001092-TA|BGIBMGA001092-PA|IPR004153|CXCXC repeat,
IPR000072|Platelet-derived growth factor (PDGF)
(195 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY079188-1|AAL91093.1| 325|Drosophila melanogaster VEGF2-A liga... 45 6e-05
AY079186-1|AAL91091.1| 314|Drosophila melanogaster VEGF2-B liga... 45 6e-05
AY051751-1|AAK93175.1| 325|Drosophila melanogaster LD28763p pro... 45 6e-05
AJ401391-1|CAC24699.1| 314|Drosophila melanogaster PDGF/VEGF fa... 45 6e-05
AE014298-2778|AAF48892.3| 325|Drosophila melanogaster CG7103-PA... 45 6e-05
U29153-1|AAA83086.1| 2616|Drosophila melanogaster serine proteas... 32 0.45
AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-P... 32 0.45
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 28 7.3
AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA... 28 9.7
>AY079188-1|AAL91093.1| 325|Drosophila melanogaster VEGF2-A ligand
long isoform protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 63 PKDVFVQLKPNSPHEL---VSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYN-- 117
P+ V+LKP + E P+ + C G C SC TE + + VR +
Sbjct: 144 PQPTIVELKPPAEDEANYYYMPACTRISRCNGCCG-STLISCQPTEVEQVQLRVRKVDRA 202
Query: 118 GNTNKESCATYAVEEHVKCGC-CALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKK 173
+ + VE+H +C C C + C + + C C C N + R +C+++
Sbjct: 203 ATSGRRPFTIITVEQHTQCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLEQ 259
>AY079186-1|AAL91091.1| 314|Drosophila melanogaster VEGF2-B ligand
short isoform protein.
Length = 314
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 63 PKDVFVQLKPNSPHEL---VSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYN-- 117
P+ V+LKP + E P+ + C G C SC TE + + VR +
Sbjct: 133 PQPTIVELKPPAEDEANYYYMPACTRISRCNGCCG-STLISCQPTEVEQVQLRVRKVDRA 191
Query: 118 GNTNKESCATYAVEEHVKCGC-CALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKK 173
+ + VE+H +C C C + C + + C C C N + R +C+++
Sbjct: 192 ATSGRRPFTIITVEQHTQCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLEQ 248
>AY051751-1|AAK93175.1| 325|Drosophila melanogaster LD28763p
protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 63 PKDVFVQLKPNSPHEL---VSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYN-- 117
P+ V+LKP + E P+ + C G C SC TE + + VR +
Sbjct: 144 PQPTIVELKPPAEDEANYYYMPACTRISRCNGCCG-STLISCQPTEVEQVQLRVRKVDRA 202
Query: 118 GNTNKESCATYAVEEHVKCGC-CALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKK 173
+ + VE+H +C C C + C + + C C C N + R +C+++
Sbjct: 203 ATSGRRPFTIITVEQHTQCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLEQ 259
>AJ401391-1|CAC24699.1| 314|Drosophila melanogaster PDGF/VEGF
factor-1 protein.
Length = 314
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 63 PKDVFVQLKPNSPHEL---VSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYN-- 117
P+ V+LKP + E P+ + C G C SC TE + + VR +
Sbjct: 133 PQPTIVELKPPAEDEANYYYMPACTRISRCNGCCG-STLISCQPTEVEQVQLRVRKVDRA 191
Query: 118 GNTNKESCATYAVEEHVKCGC-CALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKK 173
+ + VE+H +C C C + C + + C C C N + R +C+++
Sbjct: 192 ATSGRRPFTIITVEQHTQCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLEQ 248
>AE014298-2778|AAF48892.3| 325|Drosophila melanogaster CG7103-PA
protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 63 PKDVFVQLKPNSPHEL---VSPSAVWVKNCVGICDYDNEGSCIATETKIRHIPVRIYN-- 117
P+ V+LKP + E P+ + C G C SC TE + + VR +
Sbjct: 144 PQPTIVELKPPAEDEANYYYMPACTRISRCNGCCG-STLISCQPTEVEQVQLRVRKVDRA 202
Query: 118 GNTNKESCATYAVEEHVKCGC-CALSPDHCVSPRVFNPRKCSCHCPNIEDRRECVKK 173
+ + VE+H +C C C + C + + C C C N + R +C+++
Sbjct: 203 ATSGRRPFTIITVEQHTQCRCDCRTKAEDCNVYQSYRKDLCRCECHNTDARDKCLEQ 259
>U29153-1|AAA83086.1| 2616|Drosophila melanogaster serine protease
protein.
Length = 2616
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 112 PVRIYNGNTNKESCATYAVEEHVKCGC------CALSPDHCVSPRVFNPRKCSCHCPNIE 165
P +I +G K +C + E V C C C+ SP+ C+ PR F K CPN E
Sbjct: 2398 PSKICDG---KRNCWDKSDESSVLCNCTADHFQCSSSPEDCI-PRDFVCDK-EKDCPNGE 2452
Query: 166 DRREC 170
D R C
Sbjct: 2453 DERYC 2457
>AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-PA
protein.
Length = 2616
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 112 PVRIYNGNTNKESCATYAVEEHVKCGC------CALSPDHCVSPRVFNPRKCSCHCPNIE 165
P +I +G K +C + E V C C C+ SP+ C+ PR F K CPN E
Sbjct: 2398 PSKICDG---KRNCWDKSDESSVLCNCTADHFQCSSSPEDCI-PRDFVCDK-EKDCPNGE 2452
Query: 166 DRREC 170
D R C
Sbjct: 2453 DERYC 2457
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 131 EEHVKCGCCALSPDHCVSPRVFNPRKCS--CHCPNIEDRRECVKKVRK 176
+ H+KCG A S CV N ++C CP ED C V K
Sbjct: 3487 DNHMKCGATANSSAFCVD----NVKRCDGVKDCPGGEDESACTPLVCK 3530
>AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA
protein.
Length = 979
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 89 CV-GICDYDNEGSCIATETKIRH------IPVRIYNGN-TNKESCATYAVEEHVKCGCCA 140
CV G C + C+ TKI H P NG C+ A ++ C
Sbjct: 237 CVNGNCTAPDVCQCLTGYTKIGHNVCLAVCPEGCQNGVCVAPNECSCNAGYTKLEGVCTP 296
Query: 141 LSPDHCVSPRVFNPRKCSCH 160
+ D CV+ +P KCSC+
Sbjct: 297 VCKDGCVNGFCASPEKCSCN 316
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.322 0.137 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,042,334
Number of Sequences: 52641
Number of extensions: 462132
Number of successful extensions: 1054
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1047
Number of HSP's gapped (non-prelim): 14
length of query: 195
length of database: 24,830,863
effective HSP length: 81
effective length of query: 114
effective length of database: 20,566,942
effective search space: 2344631388
effective search space used: 2344631388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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