GeneModel BLAST Result against rice

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001091-TA|BGIBMGA001091-PA|IPR002861|Reeler region,
IPR009465|Spondin, N-terminal, IPR000884|Thrombospondin, type I,
IPR002223|Proteinase inhibitor I2, Kunitz metazoa,
IPR000437|Prokaryotic membrane lipoprotein lipid attachment site
         (744 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

 ***** No hits found ******

  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.321    0.135    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,593,498
Number of Sequences: 37544
Number of extensions: 918587
Number of successful extensions: 1665
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1665
Number of HSP's gapped (non-prelim): 0
length of query: 744
length of database: 14,793,348
effective HSP length: 87
effective length of query: 657
effective length of database: 11,527,020
effective search space: 7573252140
effective search space used: 7573252140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)