GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001091-TA|BGIBMGA001091-PA|IPR002861|Reeler region,
IPR009465|Spondin, N-terminal, IPR000884|Thrombospondin, type I,
IPR002223|Proteinase inhibitor I2, Kunitz metazoa,
IPR000437|Prokaryotic membrane lipoprotein lipid attachment site
         (744 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    27   1.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   4.1  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 337 RMYRITPMFPEDPRAPFYDPDSKTMAPMARLYLTREKL 374
           R +R +P     P    YDP   T+AP A  YL  EKL
Sbjct: 473 RKFRFSPS-ARTPERVEYDPKMITIAPKAGNYLKVEKL 509


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 304  WVESKIIDLYPYDAGTDNGVSYMSPNSETVPRERMYRITPM 344
            W  ++++DL+P   G    V+    N + + R  ++RI P+
Sbjct: 1683 WPMARVVDLHPGKDGVTRVVTLKCANGKEI-RRPIHRIAPL 1722


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,397
Number of Sequences: 2123
Number of extensions: 32325
Number of successful extensions: 52
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51
Number of HSP's gapped (non-prelim): 2
length of query: 744
length of database: 516,269
effective HSP length: 69
effective length of query: 675
effective length of database: 369,782
effective search space: 249602850
effective search space used: 249602850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)