Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001090-TA|BGIBMGA001090-PA|undefined
(136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39677-1|AAC47961.2| 457|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 30 0.50
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 0.88
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 29 1.5
U39855-5|AAA81084.1| 118|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 27 3.6
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 27 3.6
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.6
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.6
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 26 8.2
U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical pr... 26 8.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 26 8.2
>U39677-1|AAC47961.2| 457|Caenorhabditis elegans Hypothetical
protein C16E9.2a protein.
Length = 457
Score = 47.2 bits (107), Expect = 4e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 13 RCEFVRMKGPGGKGHAEMAVSRPRGAGVDTPTSE 46
R EFVRM+GP GKG+AEMAV+R G +TP +E
Sbjct: 281 RQEFVRMRGPQGKGYAEMAVARVPNCGYETPLTE 314
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 30.3 bits (65), Expect = 0.50
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 21 GPGGKGHAEMAVSRPRGAGVDTPTSEPGLAATDMWDSDWDEDPEELFVYRHQRRLSDPSA 80
GP G + PRG+ +TP+S A W + P LF Y H R S S+
Sbjct: 606 GPPGPVPLSGTSTLPRGSNTNTPSS-----ANASWTGGSEFTPSSLFPYSHSRSKSGESS 660
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 29.5 bits (63), Expect = 0.88
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 25 KGHAEMAVSRPRGAGVDT----PTSEPGLAATDMWDSDWDEDPEE 65
K AE +P+ V PT P AA W W++DP+E
Sbjct: 1197 KAPAEKPTEKPKPKEVSKEPPKPTEPPKPAAPKKWKPPWEDDPDE 1241
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 43 PTSEPGLAATDMWDSDWDEDPEE 65
P P AA W WD+DP+E
Sbjct: 1139 PEKAPEPAAPKKWKPVWDDDPDE 1161
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 31 AVSRPRGAGVDTPTSEPGLAATDMWDSDWDEDPEE 65
A +P + P P AA W W+EDP+E
Sbjct: 162 APKKPDTEDLADPPEPPKPAAPKKWKPPWEEDPDE 196
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 43 PTSEPGLAATDMWDSDWDEDPEE 65
P P AA W W+EDP+E
Sbjct: 256 PAEPPKPAAPKKWKPPWEEDPDE 278
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 43 PTSEPGLAATDMWDSDWDEDPEE 65
P P AA W W+EDP+E
Sbjct: 338 PAEPPKPAAPKKWKPPWEEDPDE 360
>U39855-5|AAA81084.1| 118|Caenorhabditis elegans Hypothetical
protein F18G5.1 protein.
Length = 118
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 52 TDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLDSMVS 111
TD +++D + E +++Y RR+S + + +N S E E + V
Sbjct: 24 TDSYNNDIEGTKEVIYLYIQPRRISIYAPKFKYGPNRQYSDDENETLSSDEKETENFSVQ 83
Query: 112 GVAEVEAGDLRDDILDHREEPIL 134
G++++ LD+ E ++
Sbjct: 84 NPFVTHQGNIKNANLDNHTEKVI 106
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 61 EDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLDSMVSGVAEVEAGD 120
E+P+E+ V R R S + S ++D+RD++ + NE + S
Sbjct: 67 ENPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRVSANDSV 126
Query: 121 LRDDILDHREEP 132
D +D +EP
Sbjct: 127 FEDGYVDFVDEP 138
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 61 EDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLDSMVSGVAEVEAGD 120
E+P+E+ V R R S + S ++D+RD++ + NE + S
Sbjct: 67 ENPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRVSANDSV 126
Query: 121 LRDDILDHREEP 132
D +D +EP
Sbjct: 127 FEDGYVDFVDEP 138
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 20 KGPGGKGHAEMAVSRPRGAGVDTPTSEPG 48
+GP G ++ A +P AG P EPG
Sbjct: 261 QGPAGDAGSDGAAGQPGAAGEQGPAGEPG 289
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 61 EDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLDSMVSGVAEVEAGD 120
E+P+E+ V R R S + S ++D+RD++ + NE + S
Sbjct: 67 ENPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRVSANDSV 126
Query: 121 LRDDILDHREEP 132
D +D +EP
Sbjct: 127 FEDGYVDFVDEP 138
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 61 EDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLDSMVSGVAEVEAGD 120
E+P+E+ V R R S + S ++D+RD++ + NE + S
Sbjct: 67 ENPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRVSANDSV 126
Query: 121 LRDDILDHREEP 132
D +D +EP
Sbjct: 127 FEDGYVDFVDEP 138
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 54 MWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDN 95
+W DE+P F Y Q + D I++ S W T+++
Sbjct: 1381 LWVDCADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNS 1422
>Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical
protein W06D12.2 protein.
Length = 444
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 29 EMAVSRPRGAGVDTPTSEPGLAATDMWDSDWDEDPEE 65
E A R G + + + ++ WDEDPEE
Sbjct: 389 ERAKMRNSGTQTTSQIKVASVQTAERYEQTWDEDPEE 425
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 54 MWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDN 95
+W DE+P F Y Q + D I++ S W T+++
Sbjct: 1381 LWVDCADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNS 1422
>U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical
protein K04G7.11 protein.
Length = 234
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 68 VYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSENEGLD 107
V RR P + R W+ K+ +D+ +E++GLD
Sbjct: 44 VVEEDRRSKLPKNHEAKKERDQWQVKELQDRKAAEDKGLD 83
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 54 MWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDN 95
+W DE+P F Y Q + D I++ S W T+++
Sbjct: 1381 LWVDCADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNS 1422
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.132 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,627,975
Number of Sequences: 27539
Number of extensions: 155075
Number of successful extensions: 347
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 324
Number of HSP's gapped (non-prelim): 25
length of query: 136
length of database: 12,573,161
effective HSP length: 74
effective length of query: 62
effective length of database: 10,535,275
effective search space: 653187050
effective search space used: 653187050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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