GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001090-TA|BGIBMGA001090-PA|undefined
         (136 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   2.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   3.6  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   4.7  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   4.7  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 53  DMWDSDWDEDPEELFVYRHQR 73
           D W  +WD D  +    RH R
Sbjct: 935 DCWQEEWDADALQQDASRHTR 955


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative
          tachykinin receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 23 GGKGHAEMAVSRPRGAGVDTPTSEPGLAAT 52
          G K  A  +   P G G++   +EPG +AT
Sbjct: 14 GNKSTAGTSSCCPAGTGLNGSGTEPGWSAT 43


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 98  KSRSENEGLDSMVSGVAEVEAGDLRDDILDHREEPILT 135
           K RSE  G    V G      G     ++ H + PILT
Sbjct: 122 KERSEPAGQLGTVVGWGRTSEGGTLPALVQHVDVPILT 159


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 51  ATDMWDSDWDEDPEELFVYRHQR 73
           AT+ WD  W E+ +  +  R+ +
Sbjct: 323 ATEAWDLRWSEEQQVPYAVRNNQ 345


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,106
Number of Sequences: 2123
Number of extensions: 6332
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 4
length of query: 136
length of database: 516,269
effective HSP length: 58
effective length of query: 78
effective length of database: 393,135
effective search space: 30664530
effective search space used: 30664530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)