Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001090-TA|BGIBMGA001090-PA|undefined
(136 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456402-1|CAG30288.1| 404|Homo sapiens bK268H5.1 protein. 44 2e-04
BC053595-1|AAH53595.1| 370|Homo sapiens C22orf9 protein protein. 44 2e-04
BC038414-1|AAH38414.1| 475|Homo sapiens C22orf9 protein protein. 44 2e-04
BC016882-1|AAH16882.1| 202|Homo sapiens C22orf9 protein protein. 44 2e-04
AL008718-3|CAI17946.1| 404|Homo sapiens protein ( Human DNA seq... 44 2e-04
AK124648-1|BAC85917.1| 409|Homo sapiens protein ( Homo sapiens ... 44 2e-04
AB023147-1|BAA76774.1| 348|Homo sapiens KIAA0930 protein protein. 44 2e-04
D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein. 29 4.0
DQ206871-1|ABB22046.1| 686|Homo sapiens long form collapsin res... 29 4.0
BC130300-1|AAI30301.1| 338|Homo sapiens TWIST neighbor protein. 29 5.3
BC130298-1|AAI30299.1| 338|Homo sapiens TWIST neighbor protein. 29 5.3
X53416-1|CAA37495.1| 2647|Homo sapiens protein ( Human mRNA for ... 29 7.0
L44140-1|AAA92644.1| 2647|Homo sapiens filamin protein. 29 7.0
BX936346-3|CAI43225.1| 2647|Homo sapiens filamin A, alpha (actin... 29 7.0
BX936346-2|CAI43226.1| 2607|Homo sapiens filamin A, alpha (actin... 29 7.0
BX936346-1|CAI43227.1| 2639|Homo sapiens filamin A, alpha (actin... 29 7.0
BX664723-3|CAI43197.1| 2647|Homo sapiens filamin A, alpha (actin... 29 7.0
BX664723-2|CAI43198.1| 2607|Homo sapiens filamin A, alpha (actin... 29 7.0
BX664723-1|CAI43199.1| 2639|Homo sapiens filamin A, alpha (actin... 29 7.0
BX538291-1|CAD98086.1| 76|Homo sapiens hypothetical protein pr... 29 7.0
AK090427-1|BAC03408.1| 2651|Homo sapiens FLJ00343 protein protein. 29 7.0
AB191260-1|BAD52436.1| 2620|Homo sapiens filamin A protein. 29 7.0
AB191259-1|BAD52435.1| 2612|Homo sapiens filamin A protein. 29 7.0
BC010050-1|AAH10050.2| 711|Homo sapiens CAMTA2 protein protein. 28 9.2
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AL445192-1|CAI39886.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 9.2
AL133342-1|CAI23274.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 9.2
AL035106-1|CAI43186.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 9.2
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 28 9.2
AJ320261-1|CAC86401.1| 1659|Homo sapiens P-Rex1 protein protein. 28 9.2
AB020716-1|BAA74932.1| 1234|Homo sapiens KIAA0909 protein protein. 28 9.2
>CR456402-1|CAG30288.1| 404|Homo sapiens bK268H5.1 protein.
Length = 404
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 230 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 260
>BC053595-1|AAH53595.1| 370|Homo sapiens C22orf9 protein protein.
Length = 370
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 196 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 226
>BC038414-1|AAH38414.1| 475|Homo sapiens C22orf9 protein protein.
Length = 475
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 301 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 331
>BC016882-1|AAH16882.1| 202|Homo sapiens C22orf9 protein protein.
Length = 202
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 28 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 58
>AL008718-3|CAI17946.1| 404|Homo sapiens protein ( Human DNA
sequence from clone CTA-268H5 on chromosome
22q13.2-13.3. ).
Length = 404
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 230 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 260
>AK124648-1|BAC85917.1| 409|Homo sapiens protein ( Homo sapiens
cDNA FLJ42657 fis, clone BRALZ2011796. ).
Length = 409
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 235 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 265
>AB023147-1|BAA76774.1| 348|Homo sapiens KIAA0930 protein protein.
Length = 348
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 1 MSFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSR 34
MSFG + EFVRMKGP GKGHAEMAVSR
Sbjct: 174 MSFGFY---KYSNMEFVRMKGPQGKGHAEMAVSR 204
>D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.
Length = 1805
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Query: 43 PTSEPGLAAT-DMWDSDWD 60
P +PG+A DMWD+DWD
Sbjct: 686 PKVQPGVAMQEDMWDADWD 704
>DQ206871-1|ABB22046.1| 686|Homo sapiens long form collapsin
response mediator protein 1 protein.
Length = 686
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 9 KTAARCEFVRMKGPGGKGHAEMAVSRPRGAGVDTP 43
++A R + V + GPGG VS P G+ V +P
Sbjct: 65 RSAGRPDAVGLPGPGGSEDTASDVSEPSGSAVSSP 99
>BC130300-1|AAI30301.1| 338|Homo sapiens TWIST neighbor protein.
Length = 338
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/63 (20%), Positives = 29/63 (46%)
Query: 41 DTPTSEPGLAATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSR 100
DTP E L T+ + W+E+P++ + + + D SG+++ + K +
Sbjct: 253 DTPMEESALQNTNNANGIWEEEPKKKKKKKKHQEVQDQDPVFQGSDSSGYQSDHKKKKKK 312
Query: 101 SEN 103
++
Sbjct: 313 RKH 315
>BC130298-1|AAI30299.1| 338|Homo sapiens TWIST neighbor protein.
Length = 338
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/63 (20%), Positives = 29/63 (46%)
Query: 41 DTPTSEPGLAATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSR 100
DTP E L T+ + W+E+P++ + + + D SG+++ + K +
Sbjct: 253 DTPMEESALQNTNNANGIWEEEPKKKKKKKKHQEVQDQDPVFQGSDSSGYQSDHKKKKKK 312
Query: 101 SEN 103
++
Sbjct: 313 RKH 315
>X53416-1|CAA37495.1| 2647|Homo sapiens protein ( Human mRNA for
actin-binding protein (filamin) (ABP-280). ).
Length = 2647
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>L44140-1|AAA92644.1| 2647|Homo sapiens filamin protein.
Length = 2647
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX936346-3|CAI43225.1| 2647|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2647
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX936346-2|CAI43226.1| 2607|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2607
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX936346-1|CAI43227.1| 2639|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2639
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX664723-3|CAI43197.1| 2647|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2647
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX664723-2|CAI43198.1| 2607|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2607
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX664723-1|CAI43199.1| 2639|Homo sapiens filamin A, alpha (actin
binding protein 280) protein.
Length = 2639
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 993 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1026
>BX538291-1|CAD98086.1| 76|Homo sapiens hypothetical protein
protein.
Length = 76
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 2 SFGLLGSKTAARCEFVRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLA 50
SF LL T+AR +R GPG H+ +R ++E G+A
Sbjct: 2 SFPLLWRATSARAWSLRRPGPGSPAHSGGVQTRENWIAYPLQSAEDGVA 50
>AK090427-1|BAC03408.1| 2651|Homo sapiens FLJ00343 protein protein.
Length = 2651
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 1005 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 1038
>AB191260-1|BAD52436.1| 2620|Homo sapiens filamin A protein.
Length = 2620
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 966 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 999
>AB191259-1|BAD52435.1| 2612|Homo sapiens filamin A protein.
Length = 2612
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 VRMKGPGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
V+ KG GG+G + P GA V EPGL A
Sbjct: 966 VKSKGAGGQGKVASKIVGPSGAAVPCKV-EPGLGA 999
>BC010050-1|AAH10050.2| 711|Homo sapiens CAMTA2 protein protein.
Length = 711
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 43 PTSEPGLAATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSE 102
P E GL + + + LF YR +R LS PS T+ W + D+ S
Sbjct: 104 PAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPS------TQLDWLSLDDNQFRMSI 157
Query: 103 NEGLDSMVSGVAEVEA 118
E L+ M +AE+ A
Sbjct: 158 LERLEQMEKRMAEIAA 173
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2360 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2419
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2420 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2455
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2344 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2403
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2404 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2439
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2328 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2387
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2388 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2423
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2312 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2371
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2372 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2407
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2296 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2355
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2356 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2391
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2280 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2339
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2340 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2375
>AL445192-1|CAI39886.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 PGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
PGG G + A PR G P+S PG A
Sbjct: 9 PGGDGAGDCAHPDPRAPGAAAPSSGPGPCA 38
>AL133342-1|CAI23274.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 PGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
PGG G + A PR G P+S PG A
Sbjct: 9 PGGDGAGDCAHPDPRAPGAAAPSSGPGPCA 38
>AL035106-1|CAI43186.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 PGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
PGG G + A PR G P+S PG A
Sbjct: 9 PGGDGAGDCAHPDPRAPGAAAPSSGPGPCA 38
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 35 PRGAGVDTPTSEPGL------AATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRS 88
P G DTP PG + W + W +D E V R S + R
Sbjct: 2344 PPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERK 2403
Query: 89 GWRTKDNRDKSRSENEGLDSMVSGVAEVEAGDLRDD 124
R S E L S E DL++D
Sbjct: 2404 ATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQED 2439
>AJ320261-1|CAC86401.1| 1659|Homo sapiens P-Rex1 protein protein.
Length = 1659
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 PGGKGHAEMAVSRPRGAGVDTPTSEPGLAA 51
PGG G + A PR G P+S PG A
Sbjct: 9 PGGDGAGDCAHPDPRAPGAAAPSSGPGPCA 38
>AB020716-1|BAA74932.1| 1234|Homo sapiens KIAA0909 protein protein.
Length = 1234
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 43 PTSEPGLAATDMWDSDWDEDPEELFVYRHQRRLSDPSANINNFTRSGWRTKDNRDKSRSE 102
P E GL + + + LF YR +R LS PS T+ W + D+ S
Sbjct: 620 PAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPS------TQLDWLSLDDNQFRMSI 673
Query: 103 NEGLDSMVSGVAEVEA 118
E L+ M +AE+ A
Sbjct: 674 LERLEQMEKRMAEIAA 689
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.132 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,439,886
Number of Sequences: 224733
Number of extensions: 964847
Number of successful extensions: 1701
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1682
Number of HSP's gapped (non-prelim): 40
length of query: 136
length of database: 73,234,838
effective HSP length: 82
effective length of query: 54
effective length of database: 54,806,732
effective search space: 2959563528
effective search space used: 2959563528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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