Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001089-TA|BGIBMGA001089-PA|undefined
         (54 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   1.2  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   1.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   1.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   3.6  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
          protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 27 GGSAQAVIFLGSIRYDTLTRVYDSRR 52
          G S +AV+ L +++Y  +  VY   R
Sbjct: 3  GQSVEAVMSLRALKYPMVVHVYHPYR 28


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
          protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 27 GGSAQAVIFLGSIRYDTLTRVYDSRR 52
          G S +AV+ L +++Y  +  VY   R
Sbjct: 3  GQSVEAVMSLRALKYPMVVHVYHPYR 28


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 10  VVRDGEMVCVELVARGRGG 28
           VVR G+  C E + RG+ G
Sbjct: 588 VVRYGKPHCAEEIGRGQYG 606


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 10  VVRDGEMVCVELVARGRGG 28
           VVR G+  C E + RG+ G
Sbjct: 626 VVRYGKPHCAEEIGRGQYG 644


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 22  VARGRGGSAQAVIFLGSIRYDTLTRVY 48
           +A+G   +    IF+  +  DTL R Y
Sbjct: 269 IAKGGKLACPPAIFIFDLTTDTLIRKY 295


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.330    0.144    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,372
Number of Sequences: 429
Number of extensions: 296
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 54
length of database: 140,377
effective HSP length: 34
effective length of query: 20
effective length of database: 125,791
effective search space:  2515820
effective search space used:  2515820
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.5 bits)
S2: 35 (18.2 bits)