GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001089-TA|BGIBMGA001089-PA|undefined
         (54 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   4.4  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    20   7.7  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    20   7.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 4   QVFCDIVVRDGEMVCVE 20
           ++FC    R+G  +C+E
Sbjct: 797 EIFCSWCKRNGLTICIE 813


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 22  VARGRGGSAQAVIFLGSIRYDTL 44
           +A   GG  +  +F G++ +D L
Sbjct: 408 IAFNTGGGMRTSLFAGNLTFDDL 430


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 22  VARGRGGSAQAVIFLGSIRYDTL 44
           +A   GG  +  +F G++ +D L
Sbjct: 408 IAFNTGGGMRTSLFAGNLTFDDL 430


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.330    0.144    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,896
Number of Sequences: 2123
Number of extensions: 1194
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 54
length of database: 516,269
effective HSP length: 33
effective length of query: 21
effective length of database: 446,210
effective search space:  9370410
effective search space used:  9370410
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 40 (20.2 bits)