GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001089-TA|BGIBMGA001089-PA|undefined
         (54 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p pro...    77   4e-15
AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA...    77   4e-15

>AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p
           protein.
          Length = 889

 Score = 76.6 bits (180), Expect = 4e-15
 Identities = 34/53 (64%), Positives = 43/53 (81%)

Query: 2   YRQVFCDIVVRDGEMVCVELVARGRGGSAQAVIFLGSIRYDTLTRVYDSRRGT 54
           + +VF DI+VRDGEMVCVELVA  + G+ Q VIFLGSIRYD L +VYD+R+ +
Sbjct: 187 FDEVFSDILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSS 239


>AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA
           protein.
          Length = 889

 Score = 76.6 bits (180), Expect = 4e-15
 Identities = 34/53 (64%), Positives = 43/53 (81%)

Query: 2   YRQVFCDIVVRDGEMVCVELVARGRGGSAQAVIFLGSIRYDTLTRVYDSRRGT 54
           + +VF DI+VRDGEMVCVELVA  + G+ Q VIFLGSIRYD L +VYD+R+ +
Sbjct: 187 FDEVFSDILVRDGEMVCVELVANDKDGAVQGVIFLGSIRYDALKKVYDARQSS 239


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.330    0.144    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,267,924
Number of Sequences: 52641
Number of extensions: 53731
Number of successful extensions: 77
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75
Number of HSP's gapped (non-prelim): 2
length of query: 54
length of database: 24,830,863
effective HSP length: 35
effective length of query: 19
effective length of database: 22,988,428
effective search space: 436780132
effective search space used: 436780132
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 53 (25.4 bits)