SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001088-TA|BGIBMGA001088-PA|undefined
         (106 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456402-1|CAG30288.1|  404|Homo sapiens bK268H5.1 protein.            50   1e-06
BC053595-1|AAH53595.1|  370|Homo sapiens C22orf9 protein protein.      50   1e-06
BC038414-1|AAH38414.1|  475|Homo sapiens C22orf9 protein protein.      50   1e-06
AL008718-3|CAI17946.1|  404|Homo sapiens protein ( Human DNA seq...    50   1e-06
AK124648-1|BAC85917.1|  409|Homo sapiens protein ( Homo sapiens ...    50   1e-06
AB023147-1|BAA76774.1|  348|Homo sapiens KIAA0930 protein protein.     50   1e-06
BC012070-1|AAH12070.1|  539|Homo sapiens ZBTB7B protein protein.       29   3.5  
AL451085-29|CAI13266.1|  539|Homo sapiens zinc finger and BTB do...    29   3.5  
AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.                 28   4.7  
X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.                28   6.2  
U35637-1|AAB02622.1| 3007|Homo sapiens nebulin protein.                28   6.2  
BC093405-1|AAH93405.1|  550|Homo sapiens PHF20 protein protein.        28   6.2  
BC080598-1|AAH80598.1|  550|Homo sapiens PHF20 protein protein.        28   6.2  
BC048210-1|AAH48210.1|  549|Homo sapiens PHF20 protein protein.        28   6.2  
AY134747-1|AAN08621.1|  550|Homo sapiens medulloblastoma antigen...    28   6.2  
AY027523-1|AAK13046.1| 1012|Homo sapiens transcription factor TZ...    28   6.2  
AL109965-3|CAI19247.1| 1012|Homo sapiens PHD finger protein 20 p...    28   6.2  
AL109965-2|CAM27594.1|  549|Homo sapiens PHD finger protein 20 p...    28   6.2  
AL109965-1|CAI19246.1|  543|Homo sapiens PHD finger protein 20 p...    28   6.2  
AL078461-3|CAI43145.1| 1012|Homo sapiens PHD finger protein 20 p...    28   6.2  
AL078461-2|CAI43146.2|  549|Homo sapiens PHD finger protein 20 p...    28   6.2  
AL078461-1|CAI43144.1|  543|Homo sapiens PHD finger protein 20 p...    28   6.2  
AF348207-1|AAK19748.1|  639|Homo sapiens C2H2 zinc finger protei...    28   6.2  
AF258787-1|AAG49888.1|  543|Homo sapiens glioma-expressed antige...    28   6.2  
AF220416-1|AAF34184.1|  260|Homo sapiens hepatocellular carcinom...    28   6.2  
AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.              28   6.2  
BC067271-1|AAH67271.1|  715|Homo sapiens zinc finger protein 544...    27   8.2  
AL590225-1|CAM17813.1| 1108|Homo sapiens chromosome 6 open readi...    27   8.2  
AL589910-2|CAM22452.1|  214|Homo sapiens chromosome 6 open readi...    27   8.2  
AL589910-1|CAI16051.2| 1108|Homo sapiens chromosome 6 open readi...    27   8.2  
AL365508-1|CAM16339.1| 1108|Homo sapiens chromosome 6 open readi...    27   8.2  
AL139098-2|CAM28210.1|  214|Homo sapiens chromosome 6 open readi...    27   8.2  
AL139098-1|CAI20000.2| 1108|Homo sapiens chromosome 6 open readi...    27   8.2  
AL035593-1|CAM28224.1| 1108|Homo sapiens chromosome 6 open readi...    27   8.2  
AF020591-1|AAC01956.1|  715|Homo sapiens zinc finger protein pro...    27   8.2  
AF007833-1|AAC51847.1|  539|Homo sapiens kruppel-related zinc fi...    27   8.2  

>CR456402-1|CAG30288.1|  404|Homo sapiens bK268H5.1 protein.
          Length = 404

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 139 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 173


>BC053595-1|AAH53595.1|  370|Homo sapiens C22orf9 protein protein.
          Length = 370

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 105 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 139


>BC038414-1|AAH38414.1|  475|Homo sapiens C22orf9 protein protein.
          Length = 475

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 210 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 244


>AL008718-3|CAI17946.1|  404|Homo sapiens protein ( Human DNA
           sequence from clone CTA-268H5 on chromosome
           22q13.2-13.3. ).
          Length = 404

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 139 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 173


>AK124648-1|BAC85917.1|  409|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42657 fis, clone BRALZ2011796. ).
          Length = 409

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 144 QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 178


>AB023147-1|BAA76774.1|  348|Homo sapiens KIAA0930 protein protein.
          Length = 348

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)

Query: 18  QVYASPSRRKMDTKGEGEEMTYPHICFMVDNFDEI 52
           QV+ASPS+  MD+KGE  +++YP+I FM+D+F+E+
Sbjct: 83  QVFASPSKHPMDSKGEESKISYPNIFFMIDSFEEV 117


>BC012070-1|AAH12070.1|  539|Homo sapiens ZBTB7B protein protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 70  DVQN-LHIHRFKKTIKEHLCNKAYYKVNDHLE 100
           D++N +H+H   +  + HLC+KA+ K  DHL+
Sbjct: 416 DLKNHMHLHTGDRPYECHLCHKAFAK-EDHLQ 446


>AL451085-29|CAI13266.1|  539|Homo sapiens zinc finger and BTB
           domain containing 7B protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 70  DVQN-LHIHRFKKTIKEHLCNKAYYKVNDHLE 100
           D++N +H+H   +  + HLC+KA+ K  DHL+
Sbjct: 416 DLKNHMHLHTGDRPYECHLCHKAFAK-EDHLQ 446


>AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.
          Length = 1097

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)

Query: 59  LSVRLYNKIPQDVQNLHIHRFKKTIK 84
           +++R  N  P+D   LH+H F++T++
Sbjct: 157 VTIRFENVSPEDFVGLHMHGFRRTLR 182


>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
          Length = 6669

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 64   YNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDHL 99
            Y   P+DV  +H+ R      E L  + Y+K+ D +
Sbjct: 4997 YTLGPKDVPFVHVRRVNNVTSERLYRELYHKLKDKI 5032


>U35637-1|AAB02622.1| 3007|Homo sapiens nebulin protein.
          Length = 3007

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 64   YNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDHL 99
            Y   P+DV  +H+ R      E L  + Y+K+ D +
Sbjct: 1428 YTLGPKDVPFVHVRRVNNVTSERLYRELYHKLKDKI 1463


>BC093405-1|AAH93405.1|  550|Homo sapiens PHF20 protein protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>BC080598-1|AAH80598.1|  550|Homo sapiens PHF20 protein protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>BC048210-1|AAH48210.1|  549|Homo sapiens PHF20 protein protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AY134747-1|AAN08621.1|  550|Homo sapiens medulloblastoma antigen
           MU-MB-50.72 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AY027523-1|AAK13046.1| 1012|Homo sapiens transcription factor TZP
           protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL109965-3|CAI19247.1| 1012|Homo sapiens PHD finger protein 20
           protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL109965-2|CAM27594.1|  549|Homo sapiens PHD finger protein 20
           protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL109965-1|CAI19246.1|  543|Homo sapiens PHD finger protein 20
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL078461-3|CAI43145.1| 1012|Homo sapiens PHD finger protein 20
           protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL078461-2|CAI43146.2|  549|Homo sapiens PHD finger protein 20
           protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AL078461-1|CAI43144.1|  543|Homo sapiens PHD finger protein 20
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AF348207-1|AAK19748.1|  639|Homo sapiens C2H2 zinc finger protein
           protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AF258787-1|AAG49888.1|  543|Homo sapiens glioma-expressed antigen 2
           protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AF220416-1|AAF34184.1|  260|Homo sapiens hepatocellular
           carcinoma-associated antigen 58 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 54  NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDH 98
           N  G  +V+ Y+ + Q V+++H+  F K   +++   A  K  DH
Sbjct: 111 NKDGTYTVKFYDGVVQTVKHIHVKAFSK--DQNIVGNARPKETDH 153


>AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.
          Length = 2802

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 64   YNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDHL 99
            Y   P+DV  +H+ R      E L  + Y+K+ D +
Sbjct: 1130 YTLGPKDVPFVHVRRVNNVTSERLYRELYHKLKDKI 1165


>BC067271-1|AAH67271.1|  715|Homo sapiens zinc finger protein 544
           protein.
          Length = 715

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 62  RLYNKIPQDVQNLHIHRFKKTIKEHLCNKAY 92
           + +N+  Q +++L IH  +K  K + CNKA+
Sbjct: 611 KAFNRSTQLIRHLQIHTGEKPYKCNQCNKAF 641


>AL590225-1|CAM17813.1| 1108|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 1108

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL589910-2|CAM22452.1|  214|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL589910-1|CAI16051.2| 1108|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 1108

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL365508-1|CAM16339.1| 1108|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 1108

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL139098-2|CAM28210.1|  214|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL139098-1|CAI20000.2| 1108|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 1108

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AL035593-1|CAM28224.1| 1108|Homo sapiens chromosome 6 open reading
           frame 170 protein.
          Length = 1108

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  QNLHIHRFKKTIKEHLCNKAYYKVNDHLEDCT 103
           +N H + F K +++H+ N     + + +E CT
Sbjct: 48  ENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCT 79


>AF020591-1|AAC01956.1|  715|Homo sapiens zinc finger protein
           protein.
          Length = 715

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 62  RLYNKIPQDVQNLHIHRFKKTIKEHLCNKAY 92
           + +N+  Q +++L IH  +K  K + CNKA+
Sbjct: 611 KAFNRSTQLIRHLQIHTGEKPYKCNQCNKAF 641


>AF007833-1|AAC51847.1|  539|Homo sapiens kruppel-related zinc
           finger protein hcKrox protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 70  DVQN-LHIHRFKKTIKEHLCNKAYYKVNDHLE 100
           D++N +H+H   +  + HLC++A+ K  DHL+
Sbjct: 416 DLKNHMHLHTGDRPYECHLCHRAFAK-EDHLQ 446


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.135    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,272,328
Number of Sequences: 224733
Number of extensions: 530578
Number of successful extensions: 1153
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1134
Number of HSP's gapped (non-prelim): 36
length of query: 106
length of database: 73,234,838
effective HSP length: 79
effective length of query: 27
effective length of database: 55,480,931
effective search space: 1497985137
effective search space used: 1497985137
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)

- SilkBase 1999-2023 -