GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001088-TA|BGIBMGA001088-PA|undefined
         (106 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   3.1  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    21   7.1  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    21   7.1  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    21   7.1  

>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 9/49 (18%)

Query: 32  GEGEEMTYPHICFMVDNFDEIRNSFGCLSVRLYNKIPQDVQNLHIHRFK 80
           G+G+   YPH    VD  + I+        R++N     +Q +H+ +++
Sbjct: 342 GDGKHYCYPHFTCAVDT-ENIK--------RVFNDCRDIIQRMHLRQYE 381


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 56  FGCLSVRLY 64
           FGCLSVR++
Sbjct: 272 FGCLSVRMF 280


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 30  TKGEGEEMTYPHICFMVDNFDEIRNSFGCLSVRLY 64
           T G  + M   H     D+F  +  +  CL+  LY
Sbjct: 95  TTGLQKNMVAGHFVPYPDDFHNVERTEACLAENLY 129


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 30  TKGEGEEMTYPHICFMVDNFDEIRNSFGCLSVRLY 64
           T G  + M   H     D+F  +  +  CL+  LY
Sbjct: 95  TTGLQKNMVAGHFVPYPDDFHNVERTEACLAENLY 129


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,703
Number of Sequences: 2123
Number of extensions: 4386
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 106
length of database: 516,269
effective HSP length: 56
effective length of query: 50
effective length of database: 397,381
effective search space: 19869050
effective search space used: 19869050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)