Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001087-TA|BGIBMGA001087-PA|undefined
         (79 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456402-1|CAG30288.1|  404|Homo sapiens bK268H5.1 protein.            27   9.1  
BC038414-1|AAH38414.1|  475|Homo sapiens C22orf9 protein protein.      27   9.1  
AL008718-3|CAI17946.1|  404|Homo sapiens protein ( Human DNA seq...    27   9.1  
AK124648-1|BAC85917.1|  409|Homo sapiens protein ( Homo sapiens ...    27   9.1  

>CR456402-1|CAG30288.1|  404|Homo sapiens bK268H5.1 protein.
          Length = 404

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 18 YWTDLFVRHFLFQEEQAIDCDDLLFFVRKR 47
          +WT +F  +F+  E+ A   DD+LF+VR++
Sbjct: 31 FWTWMFSTYFM--EKWAPRQDDMLFYVRRK 58


>BC038414-1|AAH38414.1|  475|Homo sapiens C22orf9 protein protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 18  YWTDLFVRHFLFQEEQAIDCDDLLFFVRKR 47
           +WT +F  +F+  E+ A   DD+LF+VR++
Sbjct: 102 FWTWMFSTYFM--EKWAPRQDDMLFYVRRK 129


>AL008718-3|CAI17946.1|  404|Homo sapiens protein ( Human DNA
          sequence from clone CTA-268H5 on chromosome
          22q13.2-13.3. ).
          Length = 404

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 18 YWTDLFVRHFLFQEEQAIDCDDLLFFVRKR 47
          +WT +F  +F+  E+ A   DD+LF+VR++
Sbjct: 31 FWTWMFSTYFM--EKWAPRQDDMLFYVRRK 58


>AK124648-1|BAC85917.1|  409|Homo sapiens protein ( Homo sapiens
          cDNA FLJ42657 fis, clone BRALZ2011796. ).
          Length = 409

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 18 YWTDLFVRHFLFQEEQAIDCDDLLFFVRKR 47
          +WT +F  +F+  E+ A   DD+LF+VR++
Sbjct: 36 FWTWMFSTYFM--EKWAPRQDDMLFYVRRK 63


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.331    0.142    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,211,883
Number of Sequences: 224733
Number of extensions: 351986
Number of successful extensions: 4010
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4010
Number of HSP's gapped (non-prelim): 4
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 57 (27.1 bits)