GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001087-TA|BGIBMGA001087-PA|undefined
         (79 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    23   0.97 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    21   3.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   5.2  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
          receptor protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 36 DCDDLLFFVRKRHVKGSSRYLPK-YEVSY 63
          D D  L F R  H  GS   LP  Y V +
Sbjct: 66 DADTYLLFTRPLHASGSQLELPAGYPVEF 94


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 51  GSSRYLPKYEVSYQDHRRL 69
           G +R   KY V Y D +RL
Sbjct: 210 GKTRTKDKYRVVYTDQQRL 228


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 60  EVSYQDHRRLRRSFWHIE 77
           +V YQ HR++ R F  I+
Sbjct: 275 KVLYQSHRKMCRQFGSIK 292


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.331    0.142    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,845
Number of Sequences: 2123
Number of extensions: 2612
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 79
length of database: 516,269
effective HSP length: 52
effective length of query: 27
effective length of database: 405,873
effective search space: 10958571
effective search space used: 10958571
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 40 (20.2 bits)