GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001087-TA|BGIBMGA001087-PA|undefined
         (79 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p pro...    99   8e-22
AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA...    99   8e-22
AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    26   7.2  

>AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p
           protein.
          Length = 889

 Score = 98.7 bits (235), Expect = 8e-22
 Identities = 45/64 (70%), Positives = 52/64 (81%), Gaps = 2/64 (3%)

Query: 7   DSGFVVLQGTTYWTDLFVRHFLFQEE--QAIDCDDLLFFVRKRHVKGSSRYLPKYEVSYQ 64
           D GFVVLQGTTYWTDLFVRHFLFQ E   +ID DDLLFFVRK+HVK SSR++PK+E   +
Sbjct: 40  DGGFVVLQGTTYWTDLFVRHFLFQTEPMHSIDSDDLLFFVRKKHVKSSSRHMPKFETEVE 99

Query: 65  DHRR 68
             R+
Sbjct: 100 VFRK 103


>AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA
           protein.
          Length = 889

 Score = 98.7 bits (235), Expect = 8e-22
 Identities = 45/64 (70%), Positives = 52/64 (81%), Gaps = 2/64 (3%)

Query: 7   DSGFVVLQGTTYWTDLFVRHFLFQEE--QAIDCDDLLFFVRKRHVKGSSRYLPKYEVSYQ 64
           D GFVVLQGTTYWTDLFVRHFLFQ E   +ID DDLLFFVRK+HVK SSR++PK+E   +
Sbjct: 40  DGGFVVLQGTTYWTDLFVRHFLFQTEPVHSIDSDDLLFFVRKKHVKSSSRHMPKFETEVE 99

Query: 65  DHRR 68
             R+
Sbjct: 100 VFRK 103


>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 14  QGTTYWTDLFVRHFLFQEEQAIDCDDLLFFVRKRHVKGSSRYLPKYEVSYQ 64
           +G T+W D+ +   L + ++AID D L        VK SS  +    + YQ
Sbjct: 653 RGVTHWLDISIIKALSRIQKAIDLDQLK--AVDETVKYSSSAVDTLSIFYQ 701


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.331    0.142    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,683,495
Number of Sequences: 52641
Number of extensions: 124972
Number of successful extensions: 340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 335
Number of HSP's gapped (non-prelim): 3
length of query: 79
length of database: 24,830,863
effective HSP length: 59
effective length of query: 20
effective length of database: 21,725,044
effective search space: 434500880
effective search space used: 434500880
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 53 (25.4 bits)