Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001086-TA|BGIBMGA001086-PA|undefined
         (64 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   2.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    19   4.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    19   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   5.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    19   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    18   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    18   9.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    18   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    18   9.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    18   9.3  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 2.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 30 KEMRQLMKDEKDIVVYNSL 48
          +EM+ ++ D K   VYN L
Sbjct: 24 QEMKDVLGDTKKKPVYNDL 42


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.0 bits (37), Expect = 4.0
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 12  KNATMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVL 55
           +NA  L   L E N Q T       + E++  + +     +KVL
Sbjct: 420 RNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVL 463


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 18.6 bits (36), Expect = 5.3
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 11  LKNATMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVLFNQSSVILH 64
           +K     +++L+E   +  ++   L+++ +      +LLV   VL N +S + +
Sbjct: 176 VKKTVAGDKVLDENAAEHREQFVSLVRELRGAFKAENLLVTLTVLPNVNSTVYY 229


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 18.6 bits (36), Expect = 5.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 8   CTFLKNATMLEQLLEEINFQRTKEMRQLMKDEK 40
           CT LK   +LE     I+F    +    + D K
Sbjct: 95  CTLLKKDKLLELFKRLIHFDTKCQENSTVIDYK 127


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 18.6 bits (36), Expect = 5.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 8   CTFLKNATMLEQLLEEINFQRTKEMRQLMKDEK 40
           CT LK   +LE     I+F    +    + D K
Sbjct: 113 CTLLKKDKLLELFKRLIHFDTKCQENSTVIDYK 145


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 17.8 bits (34), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)

Query: 41  DIVVYNSLLVWKKVLFNQSSVILH 64
           D + +    +W   L +Q+ + LH
Sbjct: 457 DFISHQHAWIWLLWLLSQTWITLH 480


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 17.8 bits (34), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)

Query: 41  DIVVYNSLLVWKKVLFNQSSVILH 64
           D + +    +W   L +Q+ + LH
Sbjct: 457 DFISHQHAWIWLLWLLSQTWITLH 480


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 17.8 bits (34), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)

Query: 41  DIVVYNSLLVWKKVLFNQSSVILH 64
           D + +    +W   L +Q+ + LH
Sbjct: 457 DFISHQHAWIWLLWLLSQTWITLH 480


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 17.8 bits (34), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)

Query: 41  DIVVYNSLLVWKKVLFNQSSVILH 64
           D + +    +W   L +Q+ + LH
Sbjct: 457 DFISHQHAWIWLLWLLSQTWITLH 480


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 17.8 bits (34), Expect = 9.3
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 14 ATMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSL 48
          A ML     E+      EMR+++ D      YN L
Sbjct: 8  ALMLIARHSEVQESIVAEMREVLGDLSKKPSYNDL 42


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,864
Number of Sequences: 317
Number of extensions: 351
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 64
length of database: 114,650
effective HSP length: 43
effective length of query: 21
effective length of database: 101,019
effective search space:  2121399
effective search space used:  2121399
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)