Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001086-TA|BGIBMGA001086-PA|undefined
         (64 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063595-1|AAH63595.1|  508|Homo sapiens melanoma-derived leucin...    28   5.2  
BC035321-1|AAH35321.1|  508|Homo sapiens melanoma-derived leucin...    28   5.2  
AJ245876-1|CAC21571.1|  262|Homo sapiens putative cytoplasmatic ...    28   5.2  
AB042405-1|BAB40331.1|  508|Homo sapiens MLZE protein.                 28   5.2  

>BC063595-1|AAH63595.1|  508|Homo sapiens melanoma-derived leucine
           zipper, extra-nuclear factor protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 21  LEEINFQRTKEMRQLMKDEKDIVVYNSL 48
           L+E  FQ+ K + QL KD +D++ Y+ L
Sbjct: 319 LQEEVFQKIKTLAQLSKDVQDVMFYSIL 346


>BC035321-1|AAH35321.1|  508|Homo sapiens melanoma-derived leucine
           zipper, extra-nuclear factor protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 21  LEEINFQRTKEMRQLMKDEKDIVVYNSL 48
           L+E  FQ+ K + QL KD +D++ Y+ L
Sbjct: 319 LQEEVFQKIKTLAQLSKDVQDVMFYSIL 346


>AJ245876-1|CAC21571.1|  262|Homo sapiens putative cytoplasmatic
           protein protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 21  LEEINFQRTKEMRQLMKDEKDIVVYNSL 48
           L+E  FQ+ K + QL KD +D++ Y+ L
Sbjct: 73  LQEEVFQKIKTLAQLSKDVQDVMFYSIL 100


>AB042405-1|BAB40331.1|  508|Homo sapiens MLZE protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 21  LEEINFQRTKEMRQLMKDEKDIVVYNSL 48
           L+E  FQ+ K + QL KD +D++ Y+ L
Sbjct: 319 LQEEVFQKIKTLAQLSKDVQDVMFYSIL 346


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.136    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,818,253
Number of Sequences: 224733
Number of extensions: 200049
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 714
Number of HSP's gapped (non-prelim): 4
length of query: 64
length of database: 73,234,838
effective HSP length: 44
effective length of query: 20
effective length of database: 63,346,586
effective search space: 1266931720
effective search space used: 1266931720
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)