GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001086-TA|BGIBMGA001086-PA|undefined
         (64 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p pro...    55   1e-08
AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA...    55   1e-08
AY069547-1|AAL39692.1|  545|Drosophila melanogaster LD27406p pro...    26   5.7  
AE013599-1859|AAF58269.2|  545|Drosophila melanogaster CG8531-PA...    26   5.7  
M24441-1|AAA28652.1|  975|Drosophila melanogaster protein ( D.me...    26   7.5  

>AY118664-1|AAM50033.1|  889|Drosophila melanogaster SD21944p
          protein.
          Length = 889

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 1  MALGLGGCTFLKNA-TMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVW 51
          MAL       LK + T L+QLLE+INFQRTKEMRQL+KD+   VV      W
Sbjct: 1  MALASAAAALLKGSQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYW 52


>AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA
          protein.
          Length = 889

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 1  MALGLGGCTFLKNA-TMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVW 51
          MAL       LK + T L+QLLE+INFQRTKEMRQL+KD+   VV      W
Sbjct: 1  MALASAAAALLKGSQTPLQQLLEDINFQRTKEMRQLLKDDGGFVVLQGTTYW 52


>AY069547-1|AAL39692.1|  545|Drosophila melanogaster LD27406p
          protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 21 LEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVLFNQSSVILH 64
          + EI F RTK   +++ D +   +Y+S  V +K L  +   ILH
Sbjct: 55 MAEIMFNRTKRAYEVLSDPQQRAIYDS--VGEKGLRTEGWEILH 96


>AE013599-1859|AAF58269.2|  545|Drosophila melanogaster CG8531-PA
          protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 21 LEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVLFNQSSVILH 64
          + EI F RTK   +++ D +   +Y+S  V +K L  +   ILH
Sbjct: 55 MAEIMFNRTKRAYEVLSDPQQRAIYDS--VGEKGLRTEGWEILH 96


>M24441-1|AAA28652.1|  975|Drosophila melanogaster protein (
           D.melanogaster kinesinheavy chain mRNA, complete cds. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 19  QLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVLFNQSSVIL 63
           Q LEE+     ++ +++    KDI   N  L  K+ +FN +S  L
Sbjct: 509 QALEELTVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTEL 553


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.136    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,632,186
Number of Sequences: 52641
Number of extensions: 72657
Number of successful extensions: 293
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 290
Number of HSP's gapped (non-prelim): 5
length of query: 64
length of database: 24,830,863
effective HSP length: 44
effective length of query: 20
effective length of database: 22,514,659
effective search space: 450293180
effective search space used: 450293180
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)