GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001086-TA|BGIBMGA001086-PA|undefined
         (64 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   2.0  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    19   3.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   4.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    19   6.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    19   6.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    19   6.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   8.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   8.1  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 11  LKNATMLEQLLEEINFQRTKEMRQLMKDEKDIVVYNSLLVWKKVLFNQS 59
           L+NA  L+ +L + + Q    +R+L+K   D+   N+L   K + F  +
Sbjct: 366 LRNA--LQTVLAQNHPQHPDILRELLKKIPDLRTLNTLHSEKLLAFKMT 412


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
          finger domain-Z1 isoform protein.
          Length = 111

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 11 LKNATMLEQLLEEINFQRTKEMRQLMKDEKD 41
          L+N   +       N Q+ KEM Q+ + E++
Sbjct: 48 LRNHKSIYHRQHSKNEQQRKEMEQMRERERE 78


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 37  KDEKDIVVYNSLLVWKKVLFNQS 59
           K E    +Y+SLL + + +F Q+
Sbjct: 374 KSEPRRSIYSSLLRYPRSIFRQT 396


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 11  LKNATMLEQLLEEINFQRTKEMRQLMKD 38
           ++    LE++L+EI  + T+      KD
Sbjct: 117 MRGKKSLEEILDEIKKKTTRFQDSRSKD 144


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 11  LKNATMLEQLLEEINFQRTKEMRQLMKD 38
           ++    LE++L+EI  + T+      KD
Sbjct: 117 MRGKKSLEEILDEIKKKTTRFQDSRSKD 144


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 11  LKNATMLEQLLEEINFQRTKEMRQLMKD 38
           ++    LE++L+EI  + T+      KD
Sbjct: 117 MRGKKSLEEILDEIKKKTTRFQDSRSKD 144


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
          isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 10 FLKNATMLEQLLEE 23
          +L+N   L+ +LEE
Sbjct: 12 YLRNRNQLQHVLEE 25


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/27 (18%), Positives = 15/27 (55%)

Query: 30   KEMRQLMKDEKDIVVYNSLLVWKKVLF 56
            +E+R  ++    I+ +N    W+++ +
Sbjct: 1176 RELRPYLRTAAAILTWNEKRFWERLRY 1202


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,505
Number of Sequences: 429
Number of extensions: 501
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 64
length of database: 140,377
effective HSP length: 44
effective length of query: 20
effective length of database: 121,501
effective search space:  2430020
effective search space used:  2430020
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.2 bits)
S2: 35 (18.2 bits)