Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001085-TA|BGIBMGA001085-PA|IPR004729|Transient receptor
potential channel, IPR002110|Ankyrin, IPR013555|Transient receptor ion
channel II, IPR005821|Ion transport, IPR001086|Prephenate dehydratase
(1024 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 664 0.0
AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous... 661 0.0
AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transien... 661 0.0
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 449 e-126
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 449 e-126
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 444 e-124
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 88 3e-17
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 88 3e-17
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 88 3e-17
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 87 8e-17
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 37 0.084
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 32 1.8
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 32 1.8
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 31 3.2
U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase ... 31 3.2
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 4.2
Z80219-5|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 4.2
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 31 4.2
Z99281-16|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 31 5.5
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 31 5.5
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 31 5.5
AL110487-12|CAB54422.1| 148|Caenorhabditis elegans Hypothetical... 30 7.3
Z68750-4|CAA92968.3| 256|Caenorhabditis elegans Hypothetical pr... 30 9.7
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 30 9.7
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 30 9.7
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 30 9.7
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 664 bits (1640), Expect = 0.0
Identities = 337/723 (46%), Positives = 455/723 (62%), Gaps = 22/723 (3%)
Query: 65 LEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXXXXX 124
L EK++LL ERGD+ R++L T N++C+DPLGR+ALL+AI+
Sbjct: 32 LREKQFLLSCERGDIGSVRKLLAGI-STETFNINCLDPLGRNALLIAIENENIEMIELLL 90
Query: 125 XFGVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPETATFTSDITPLIL 184
+ET DA+L+AI EE VEAVE +++H E+ K + +A FT DITP++L
Sbjct: 91 DHNIETGDAILYAIGEENVEAVEIIVEHLEKMDKFDSERQGVEITEHSA-FTPDITPIVL 149
Query: 185 AAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYRXXXXXXX 244
AAH+D+YE IKL LD+ +P PHDVRC C +C +R EDSLR SRSRINAYR
Sbjct: 150 AAHKDNYECIKLFLDKKGTVPHPHDVRCSCPECYVAREEDSLRLSRSRINAYRALTSPSL 209
Query: 245 XXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRTSNELQIL 304
+DPIL AFELSWEL+RLS +E+EF+T+Y+EL +CQ+F +LD R S EL+++
Sbjct: 210 ICLSARDPILYAFELSWELKRLSFIENEFRTDYEELSQKCQKFCVHMLDQVRGSKELEVV 269
Query: 305 LNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFR 364
LNH A G PE +L+RLKLAI+L QK+FVAHPN QQLL IWYE V R
Sbjct: 270 LNHTTNAWHDVTSANYGNPE--KLARLKLAIQLSQKRFVAHPNCQQLLLDIWYEGVESVR 327
Query: 365 RKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFMFLFLLIL 424
N + + + FPL+SL Y+ APHS++G+ +KPFIKFL HS SY FL LLI+
Sbjct: 328 CTNFIYKLIFYILGMLSFPLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLIM 387
Query: 425 ASQRIETAPGGLLW-DVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWDMGLREY 483
ASQR+ L DV E RG P+I+E I WV GLIW E+KQLW+ GL Y
Sbjct: 388 ASQRMNVIDNILRTDDVDRKE---TRGPPPTIIECAIFLWVLGLIWVEIKQLWECGLYNY 444
Query: 484 VHDMWNVIDFVTNSLYVATVALRIVSHYQVRREM----AMGLQWNQPREKWDAWDPMLLS 539
++WN++DF+TNSLY+ T ALR+V++ QV +E ++ + + PR WDAWDP LLS
Sbjct: 445 CRNLWNILDFITNSLYLCTTALRVVAYVQVEQEALRANSVHIARHLPRRDWDAWDPTLLS 504
Query: 540 EGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQL 599
E F+ ANIFSSLKLV+IF+V+PHLGPL++SL RMV+DI+KFF++ LV+FAF+CGLNQL
Sbjct: 505 ECFFATANIFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFACGLNQL 564
Query: 600 LWYYADMEKKRCTVGTALTPNGTL---------PDPDACVVWRRLFETMQTLFWAAFGLV 650
LWYYA M + C + +L D ++ T +TLFWA FGLV
Sbjct: 565 LWYYASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETLFWALFGLV 624
Query: 651 DLDSFELDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFAR 710
DL F L + + G +FG+Y +SYQ IS++AD+EWKFAR
Sbjct: 625 DLTHFRLKEDHFLSEWTGKTIFGSYCCCSIIVLLNMLIAMMSNSYQYISDQADIEWKFAR 684
Query: 711 SKLWISYFEEGGTAPPPFNVLPSPKSLLYAWRWLQRRLCGHARAKR-EHMRTIRAIMRNL 769
S+L++ YF++ T PPPFN++PSPKS+ Y +L ++LC + ++ +++R +NL
Sbjct: 685 SRLFLEYFDDTATLPPPFNIVPSPKSIYYCLHYLTKKLCNCTKLQQPSKQKSMRVESKNL 744
Query: 770 VRR 772
R
Sbjct: 745 AIR 747
>AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous
cation channel proteinprotein.
Length = 816
Score = 661 bits (1634), Expect = 0.0
Identities = 338/723 (46%), Positives = 457/723 (63%), Gaps = 26/723 (3%)
Query: 65 LEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXXXXX 124
L EK++LL ERGD+ R++L T N++C+DPLGR+ALL+AI+
Sbjct: 32 LREKQFLLSCERGDIGSVRKLLAGI-STETFNINCLDPLGRNALLIAIENENIEMIELLL 90
Query: 125 XFGVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPETATFTSDITPLIL 184
+ET DA+L+AI EE VEAVE +++H E+ K + +A FT DITP++L
Sbjct: 91 DHNIETGDAILYAIGEENVEAVEIIVEHLEKMDKFDSERQGVEITEHSA-FTPDITPIVL 149
Query: 185 AAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYRXXXXXXX 244
AAH+D+YE IKL LD+ +P PHDVRC C +C +R EDSLR SRSRINAYR
Sbjct: 150 AAHKDNYECIKLFLDKKGTVPHPHDVRCSCPECYVAREEDSLRLSRSRINAYRALTSPSL 209
Query: 245 XXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRTSNELQIL 304
+DPIL AFELSWEL+RLS +E+EF+T+Y+EL +CQ+F +LD R S EL+++
Sbjct: 210 ICLSARDPILYAFELSWELKRLSFIENEFRTDYEELSQKCQKFCVHMLDQVRGSKELEVV 269
Query: 305 LNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFR 364
LNH A G PE +L+RLKLAI+L QK+FVAHPN QQLL IWYE V R
Sbjct: 270 LNHTTNAWHDVTSANYGNPE--KLARLKLAIQLSQKRFVAHPNCQQLLLDIWYEGVESVR 327
Query: 365 RKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFMFLFLLIL 424
N + + + FPL+SL Y+ APHS++G+ +KPFIKFL HS SY FL LLI+
Sbjct: 328 CTNFIYKLIFYILGMLSFPLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLIM 387
Query: 425 ASQRIETAPGGLLW-DVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWDMGLREY 483
ASQR+ L DV E RG P+I+E I WV GLIW E+KQLW+ GL Y
Sbjct: 388 ASQRMNVIDNILRTDDVDRKE---TRGPPPTIIECAIFLWVLGLIWVEIKQLWECGLYNY 444
Query: 484 VHDMWNVIDFVTNSLYVATVALRIVSHYQVRREM----AMGLQWNQPREKWDAWDPMLLS 539
++WN++DF+TNSLY+ T ALR+V++ QV +E ++ + + PR WDAWDP LLS
Sbjct: 445 CRNLWNILDFITNSLYLCTTALRVVAYVQVEQEALRANSVHIARHLPRRDWDAWDPTLLS 504
Query: 540 EGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQL 599
E F+ ANIFSSLKLV+IF+V+PHLGPL++SL RMV+DI+KFF++ LV+FAF+CGLNQL
Sbjct: 505 ECFFATANIFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFACGLNQL 564
Query: 600 LWYYADMEKKRCTVGTALTPNGTL---------PDPDACVVWRRLFETMQTLFWAAFGLV 650
LWYYA M + C + +L D ++ T +TLFWA FGLV
Sbjct: 565 LWYYASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETLFWALFGLV 624
Query: 651 DLDSFELDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFAR 710
DL F L + + G +FG+Y +SYQ IS++AD+EWKFAR
Sbjct: 625 DLTHFRLKEDHFLSEWTGKTIFGSYCCCSIIVLLNMLIAMMSNSYQYISDQADIEWKFAR 684
Query: 711 SKLWISYFEEGGTAPPPFNVLPSPKSLLYAWRWLQRRLCGHAR----AKREHMRTIRAIM 766
S+L++ YF++ T PPPFN++PSPKS+ Y +L ++LC + +K++ MR + I+
Sbjct: 685 SRLFLEYFDDTATLPPPFNIVPSPKSIYYCLHYLTKKLCNCTKLQQPSKQKSMRN-QKIL 743
Query: 767 RNL 769
R++
Sbjct: 744 RSV 746
>AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform a
protein.
Length = 816
Score = 661 bits (1634), Expect = 0.0
Identities = 338/723 (46%), Positives = 457/723 (63%), Gaps = 26/723 (3%)
Query: 65 LEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXXXXX 124
L EK++LL ERGD+ R++L T N++C+DPLGR+ALL+AI+
Sbjct: 32 LREKQFLLSCERGDIGSVRKLLAGI-STETFNINCLDPLGRNALLIAIENENIEMIELLL 90
Query: 125 XFGVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPETATFTSDITPLIL 184
+ET DA+L+AI EE VEAVE +++H E+ K + +A FT DITP++L
Sbjct: 91 DHNIETGDAILYAIGEENVEAVEIIVEHLEKMDKFDSERQGVEITEHSA-FTPDITPIVL 149
Query: 185 AAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYRXXXXXXX 244
AAH+D+YE IKL LD+ +P PHDVRC C +C +R EDSLR SRSRINAYR
Sbjct: 150 AAHKDNYECIKLFLDKKGTVPHPHDVRCSCPECYVAREEDSLRLSRSRINAYRALTSPSL 209
Query: 245 XXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRTSNELQIL 304
+DPIL AFELSWEL+RLS +E+EF+T+Y+EL +CQ+F +LD R S EL+++
Sbjct: 210 ICLSARDPILYAFELSWELKRLSFIENEFRTDYEELSQKCQKFCVHMLDQVRGSKELEVV 269
Query: 305 LNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFR 364
LNH A G PE +L+RLKLAI+L QK+FVAHPN QQLL IWYE V R
Sbjct: 270 LNHTTNAWHDVTSANYGNPE--KLARLKLAIQLSQKRFVAHPNCQQLLLDIWYEGVESVR 327
Query: 365 RKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFMFLFLLIL 424
N + + + FPL+SL Y+ APHS++G+ +KPFIKFL HS SY FL LLI+
Sbjct: 328 CTNFIYKLIFYILGMLSFPLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLIM 387
Query: 425 ASQRIETAPGGLLW-DVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWDMGLREY 483
ASQR+ L DV E RG P+I+E I WV GLIW E+KQLW+ GL Y
Sbjct: 388 ASQRMNVIDNILRTDDVDRKE---TRGPPPTIIECAIFLWVLGLIWVEIKQLWECGLYNY 444
Query: 484 VHDMWNVIDFVTNSLYVATVALRIVSHYQVRREM----AMGLQWNQPREKWDAWDPMLLS 539
++WN++DF+TNSLY+ T ALR+V++ QV +E ++ + + PR WDAWDP LLS
Sbjct: 445 CRNLWNILDFITNSLYLCTTALRVVAYVQVEQEALRANSVHIARHLPRRDWDAWDPTLLS 504
Query: 540 EGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQL 599
E F+ ANIFSSLKLV+IF+V+PHLGPL++SL RMV+DI+KFF++ LV+FAF+CGLNQL
Sbjct: 505 ECFFATANIFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFACGLNQL 564
Query: 600 LWYYADMEKKRCTVGTALTPNGTL---------PDPDACVVWRRLFETMQTLFWAAFGLV 650
LWYYA M + C + +L D ++ T +TLFWA FGLV
Sbjct: 565 LWYYASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETLFWALFGLV 624
Query: 651 DLDSFELDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFAR 710
DL F L + + G +FG+Y +SYQ IS++AD+EWKFAR
Sbjct: 625 DLTHFRLKEDHFLSEWTGKTIFGSYCCCSIIVLLNMLIAMMSNSYQYISDQADIEWKFAR 684
Query: 711 SKLWISYFEEGGTAPPPFNVLPSPKSLLYAWRWLQRRLCGHAR----AKREHMRTIRAIM 766
S+L++ YF++ T PPPFN++PSPKS+ Y +L ++LC + +K++ MR + I+
Sbjct: 685 SRLFLEYFDDTATLPPPFNIVPSPKSIYYCLHYLTKKLCNCTKLQQPSKQKSMRN-QKIL 743
Query: 767 RNL 769
R++
Sbjct: 744 RSV 746
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 449 bits (1107), Expect = e-126
Identities = 273/794 (34%), Positives = 427/794 (53%), Gaps = 56/794 (7%)
Query: 62 VLSLEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXX 121
++S EE+++L E G+ + L D +NV+C+D +GR+AL +A+D
Sbjct: 45 MISPEERRFLEAAELGNKPTLQECLDYDGDR-RLNVNCLDSMGRTALEIAVDNENMEVVE 103
Query: 122 XXXXF-GVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPE---TATFTS 177
+ +ALL AI E VE L++H TR+ +AL P +A ++S
Sbjct: 104 LLLQQPDIRIGNALLCAIREGVYRLVEVLVNHPNITREMLGDGWSQALDPSEAASAEYSS 163
Query: 178 DITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYR 237
DI+P+ILAA + +EI+++L+ + A + +PH C C+ C R R DSL++S RIN +R
Sbjct: 164 DISPVILAAQLNQFEILQMLIRKDASIEKPHRHSCICETCDRERLNDSLQYSLKRINTFR 223
Query: 238 XXXXXXXXXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRT 297
DPIL+AF+LSW+L+RL+ EHEFK Y +L QC++++ LL R+
Sbjct: 224 ALASPAWMSLTSPDPILSAFKLSWDLQRLAFEEHEFKETYLQLSEQCKQYSCDLLSQCRS 283
Query: 298 SNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWY 357
S E+ +LN K + + A ++ LSRLKLAIK QK FV+HP+ QQLL SIWY
Sbjct: 284 SEEVIAILN--KDGNVNDDNIDVWA-SKLSLSRLKLAIKYEQKAFVSHPHCQQLLTSIWY 340
Query: 358 ESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFM 417
E +P +R + ++P++ L YI P S +GR +R PF+KF +S S+
Sbjct: 341 EGIPYRQRSGTWANFFLYAFLLFLWPIFCLMYILMPKSRLGRLVRSPFMKFFYYSVSFAT 400
Query: 418 FLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWD 477
FL LL A+ G ++ S RG + VE L+ WV G++WSE+KQLW+
Sbjct: 401 FLGLLTWATFEDYRYEKGERGGMTR---ASDRGPPATWVESLVFTWVIGMLWSEIKQLWE 457
Query: 478 MGLREYVHDMWNVIDFVTNSLYVATVALRIVSHY-QVRREMAMGLQWNQPREKWDAWDPM 536
G + Y+ WN +DF+ LY+ T+++R+ ++Y RE R W + +PM
Sbjct: 458 EGFKRYMRQWWNWLDFLMICLYLCTISIRLSAYYIFTYREDPYRY---TVRTYWTSEEPM 514
Query: 537 LLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGL 596
L++E LF+ N+FS +++Y+F NP+LGPLQ+SL M++D+ KF + +L+I +FS GL
Sbjct: 515 LVAEALFAVGNVFSFARIIYLFQTNPYLGPLQISLGCMLVDVAKFCFIFVLIISSFSIGL 574
Query: 597 NQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFGLVDLDSFE 656
QL WYY D C G + V+ + ++ TL W+ F + + +
Sbjct: 575 AQLYWYY-DPNTDVCLPGATCKHSSN--------VFSSIADSYLTLLWSLFSITKPEDTD 625
Query: 657 LDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFARSKLWIS 716
+ T++ G MF Y HS+Q+I++ AD+EWKF R+KLW++
Sbjct: 626 VVENHKITQWVGQGMFIMYHCTSIIVLLNMLIAMMSHSFQIINDHADLEWKFHRTKLWMA 685
Query: 717 YFEEGGTAPPPFNVLPSPKSLLYAW-------RWL------QR-------RLCGHARAKR 756
+F+EG + PPPFN++ +PKSL+Y RWL Q+ R G++R +
Sbjct: 686 HFDEGSSLPPPFNIIVTPKSLIYVMNCLFNTVRWLLGKYTYQKNRNRATIRRPGYSRKRN 745
Query: 757 EHMR------------TIRAIMRNLVRRYVTVQQRRAESGGVTEDDVNEIKQDVSAFRCE 804
E + T I+ LV R++ ++ + GV EDD++EIKQD+S+ R E
Sbjct: 746 EMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDGVNEDDLHEIKQDISSLRYE 805
Query: 805 LVEILRNSGMNTST 818
L + R + +S+
Sbjct: 806 LRDDRRREIVRSSS 819
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 449 bits (1107), Expect = e-126
Identities = 273/794 (34%), Positives = 427/794 (53%), Gaps = 56/794 (7%)
Query: 62 VLSLEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXX 121
++S EE+++L E G+ + L D +NV+C+D +GR+AL +A+D
Sbjct: 45 MISPEERRFLEAAELGNKPTLQECLDYDGDR-RLNVNCLDSMGRTALEIAVDNENMEVVE 103
Query: 122 XXXXF-GVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPE---TATFTS 177
+ +ALL AI E VE L++H TR+ +AL P +A ++S
Sbjct: 104 LLLQQPDIRIGNALLCAIREGVYRLVEVLVNHPNITREMLGDGWSQALDPSEAASAEYSS 163
Query: 178 DITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYR 237
DI+P+ILAA + +EI+++L+ + A + +PH C C+ C R R DSL++S RIN +R
Sbjct: 164 DISPVILAAQLNQFEILQMLIRKDASIEKPHRHSCICETCDRERLNDSLQYSLKRINTFR 223
Query: 238 XXXXXXXXXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRT 297
DPIL+AF+LSW+L+RL+ EHEFK Y +L QC++++ LL R+
Sbjct: 224 ALASPAWMSLTSPDPILSAFKLSWDLQRLAFEEHEFKETYLQLSEQCKQYSCDLLSQCRS 283
Query: 298 SNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWY 357
S E+ +LN K + + A ++ LSRLKLAIK QK FV+HP+ QQLL SIWY
Sbjct: 284 SEEVIAILN--KDGNVNDDNIDVWA-SKLSLSRLKLAIKYEQKAFVSHPHCQQLLTSIWY 340
Query: 358 ESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFM 417
E +P +R + ++P++ L YI P S +GR +R PF+KF +S S+
Sbjct: 341 EGIPYRQRSGTWANFFLYAFLLFLWPIFCLMYILMPKSRLGRLVRSPFMKFFYYSVSFAT 400
Query: 418 FLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWD 477
FL LL A+ G ++ S RG + VE L+ WV G++WSE+KQLW+
Sbjct: 401 FLGLLTWATFEDYRYEKGERGGMTR---ASDRGPPATWVESLVFTWVIGMLWSEIKQLWE 457
Query: 478 MGLREYVHDMWNVIDFVTNSLYVATVALRIVSHY-QVRREMAMGLQWNQPREKWDAWDPM 536
G + Y+ WN +DF+ LY+ T+++R+ ++Y RE R W + +PM
Sbjct: 458 EGFKRYMRQWWNWLDFLMICLYLCTISIRLSAYYIFTYREDPYRY---TVRTYWTSEEPM 514
Query: 537 LLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGL 596
L++E LF+ N+FS +++Y+F NP+LGPLQ+SL M++D+ KF + +L+I +FS GL
Sbjct: 515 LVAEALFAVGNVFSFARIIYLFQTNPYLGPLQISLGCMLVDVAKFCFIFVLIISSFSIGL 574
Query: 597 NQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFGLVDLDSFE 656
QL WYY D C G + V+ + ++ TL W+ F + + +
Sbjct: 575 AQLYWYY-DPNTDVCLPGATCKHSSN--------VFSSIADSYLTLLWSLFSITKPEDTD 625
Query: 657 LDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFARSKLWIS 716
+ T++ G MF Y HS+Q+I++ AD+EWKF R+KLW++
Sbjct: 626 VVENHKITQWVGQGMFIMYHCTSIIVLLNMLIAMMSHSFQIINDHADLEWKFHRTKLWMA 685
Query: 717 YFEEGGTAPPPFNVLPSPKSLLYAW-------RWL------QR-------RLCGHARAKR 756
+F+EG + PPPFN++ +PKSL+Y RWL Q+ R G++R +
Sbjct: 686 HFDEGSSLPPPFNIIVTPKSLIYVMNCLFNTVRWLLGKYTYQKNRNRATIRRPGYSRKRN 745
Query: 757 EHMR------------TIRAIMRNLVRRYVTVQQRRAESGGVTEDDVNEIKQDVSAFRCE 804
E + T I+ LV R++ ++ + GV EDD++EIKQD+S+ R E
Sbjct: 746 EMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDGVNEDDLHEIKQDISSLRYE 805
Query: 805 LVEILRNSGMNTST 818
L + R + +S+
Sbjct: 806 LRDDRRREIVRSSS 819
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 444 bits (1093), Expect = e-124
Identities = 272/794 (34%), Positives = 424/794 (53%), Gaps = 56/794 (7%)
Query: 62 VLSLEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDXXXXXXXX 121
+LS ++L E G+ + L D +NV+C+D +GR+AL +A+D
Sbjct: 65 ILSNNLFRFLEAAELGNKPTLQECLDYDGDR-RLNVNCLDSMGRTALEIAVDNENMEVVE 123
Query: 122 XXXXF-GVETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPE---TATFTS 177
+ +ALL AI E VE L++H TR+ +AL P +A ++S
Sbjct: 124 LLLQQPDIRIGNALLCAIREGVYRLVEVLVNHPNITREMLGDGWSQALDPSEAASAEYSS 183
Query: 178 DITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSRINAYR 237
DI+P+ILAA + +EI+++L+ + A + +PH C C+ C R R DSL++S RIN +R
Sbjct: 184 DISPVILAAQLNQFEILQMLIRKDASIEKPHRHSCICETCDRERLNDSLQYSLKRINTFR 243
Query: 238 XXXXXXXXXXXXKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRT 297
DPIL+AF+LSW+L+RL+ EHEFK Y +L QC++++ LL R+
Sbjct: 244 ALASPAWMSLTSPDPILSAFKLSWDLQRLAFEEHEFKETYLQLSEQCKQYSCDLLSQCRS 303
Query: 298 SNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWY 357
S E+ +LN K + + A ++ LSRLKLAIK QK FV+HP+ QQLL SIWY
Sbjct: 304 SEEVIAILN--KDGNVNDDNIDVWA-SKLSLSRLKLAIKYEQKAFVSHPHCQQLLTSIWY 360
Query: 358 ESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKFLCHSASYFM 417
E +P +R + ++P++ L YI P S +GR +R PF+KF +S S+
Sbjct: 361 EGIPYRQRSGTWANFFLYAFLLFLWPIFCLMYILMPKSRLGRLVRSPFMKFFYYSVSFAT 420
Query: 418 FLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWD 477
FL LL A+ G ++ S RG + VE L+ WV G++WSE+KQLW+
Sbjct: 421 FLGLLTWATFEDYRYEKGERGGMTR---ASDRGPPATWVESLVFTWVIGMLWSEIKQLWE 477
Query: 478 MGLREYVHDMWNVIDFVTNSLYVATVALRIVSHY-QVRREMAMGLQWNQPREKWDAWDPM 536
G + Y+ WN +DF+ LY+ T+++R+ ++Y RE R W + +PM
Sbjct: 478 EGFKRYMRQWWNWLDFLMICLYLCTISIRLSAYYIFTYREDPYRY---TVRTYWTSEEPM 534
Query: 537 LLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGL 596
L++E LF+ N+FS +++Y+F NP+LGPLQ+SL M++D+ KF + +L+I +FS GL
Sbjct: 535 LVAEALFAVGNVFSFARIIYLFQTNPYLGPLQISLGCMLVDVAKFCFIFVLIISSFSIGL 594
Query: 597 NQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFGLVDLDSFE 656
QL WYY D C G + V+ + ++ TL W+ F + + +
Sbjct: 595 AQLYWYY-DPNTDVCLPGATCKHSSN--------VFSSIADSYLTLLWSLFSITKPEDTD 645
Query: 657 LDGIKIFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFARSKLWIS 716
+ T++ G MF Y HS+Q+I++ AD+EWKF R+KLW++
Sbjct: 646 VVENHKITQWVGQGMFIMYHCTSIIVLLNMLIAMMSHSFQIINDHADLEWKFHRTKLWMA 705
Query: 717 YFEEGGTAPPPFNVLPSPKSLLYAW-------RWL------QR-------RLCGHARAKR 756
+F+EG + PPPFN++ +PKSL+Y RWL Q+ R G++R +
Sbjct: 706 HFDEGSSLPPPFNIIVTPKSLIYVMNCLFNTVRWLLGKYTYQKNRNRATIRRPGYSRKRN 765
Query: 757 EHMR------------TIRAIMRNLVRRYVTVQQRRAESGGVTEDDVNEIKQDVSAFRCE 804
E + T I+ LV R++ ++ + GV EDD++EIKQD+S+ R E
Sbjct: 766 EMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDGVNEDDLHEIKQDISSLRYE 825
Query: 805 LVEILRNSGMNTST 818
L + R + +S+
Sbjct: 826 LRDDRRREIVRSSS 839
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 87.8 bits (208), Expect = 3e-17
Identities = 116/573 (20%), Positives = 229/573 (39%), Gaps = 58/573 (10%)
Query: 175 FTSDITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSR-I 233
F +TPL+LA +++ I++ L+ RG + PH + C C C +RE HS +R +
Sbjct: 140 FPPHMTPLMLACILNNFSIVQCLITRGHCIQIPHFITCECKTC---KRETVTTHSSTRLV 196
Query: 234 NAYRXXXXXXXXXXXXKDPILTAFELSWELRRLSALEH-EFKTEYQELRVQCQEFATALL 292
+ R D ++ +L++L++ + E+ Y++L + Q F +
Sbjct: 197 DVMRALSSEAYLWLATDDVFAATCAVARDLQQLASDDQLEYVETYRDLEMNVQRFLCRIS 256
Query: 293 DHTRTSNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLL 352
D +E +++ + + P+ +TE +P RL++A+ + ++F N Q +
Sbjct: 257 DQAWRVDEFNMMVAN-RNYCPER-MTEISSP------RLQMAMDSQMRQFTCSTNSQTTI 308
Query: 353 ASI----WYESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKF 408
S+ WY G + K A +R + P + + P G T+ P +F
Sbjct: 309 KSVFRSDWYNY--GIKPKR---DAWRFLRACILMPFLVMLHAFMP--TKGTTMCVPLARF 361
Query: 409 LCHSASYFMFLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLI 468
+ H Y +FL IL T W S + + +E + A+V GL
Sbjct: 362 IAHITMYLVFLIAAILR----PTIGFYFAWTDSIEVTV-------QALEIFMYAYVMGLA 410
Query: 469 WSEVKQLWDMGLREYVHDMWNVIDFVTNSLYVATVALRIVSHYQVRREMAMGLQWNQPRE 528
+ + +G + W D +++ +L + +RE A + R
Sbjct: 411 LEKGILFYRVGRDGFFAFWWRWFDAAL--IFIFLFSLIFFTGKWGKRE-AFDPS-SVDRM 466
Query: 529 KWDAWDPMLLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILV 588
W +++ LL E + A + S LK Y + +G +S+ + V + ++ + +
Sbjct: 467 HWPSFEFSLLHEICLAIACVLSILKCFYYAQMMKSIGGSVISVGKCVGKTYTYILIMVAI 526
Query: 589 IFAFSCGLNQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFG 648
I +FS GLN ++ Y + + +G T D+ + + + + LFW+ FG
Sbjct: 527 IVSFSVGLNIIVDPY--LNRSTMKIGDQDYTKTT----DS---YETIGTSSKNLFWSIFG 577
Query: 649 LVDLDSF---------ELDGIK-IFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLI 698
+ +F +D +K ++ Y +
Sbjct: 578 YLGPSTFTTVVGNTGPNMDPVKHTLNSSTFEILAAVYHGILIITVLNLMTSILVKGADEV 637
Query: 699 SERADVEWKFARSKLWISYFEEGGTAPPPFNVL 731
+ ++E+KF R+ ++ + APPP N++
Sbjct: 638 LDNEEMEFKFTRAAIYSEFLSWEMAAPPPLNLI 670
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 87.8 bits (208), Expect = 3e-17
Identities = 116/573 (20%), Positives = 229/573 (39%), Gaps = 58/573 (10%)
Query: 175 FTSDITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSR-I 233
F +TPL+LA +++ I++ L+ RG + PH + C C C +RE HS +R +
Sbjct: 140 FPPHMTPLMLACILNNFSIVQCLITRGHCIQIPHFITCECKTC---KRETVTTHSSTRLV 196
Query: 234 NAYRXXXXXXXXXXXXKDPILTAFELSWELRRLSALEH-EFKTEYQELRVQCQEFATALL 292
+ R D ++ +L++L++ + E+ Y++L + Q F +
Sbjct: 197 DVMRALSSEAYLWLATDDVFAATCAVARDLQQLASDDQLEYVETYRDLEMNVQRFLCRIS 256
Query: 293 DHTRTSNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLL 352
D +E +++ + + P+ +TE +P RL++A+ + ++F N Q +
Sbjct: 257 DQAWRVDEFNMMVAN-RNYCPER-MTEISSP------RLQMAMDSQMRQFTCSTNSQTTI 308
Query: 353 ASI----WYESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKF 408
S+ WY G + K A +R + P + + P G T+ P +F
Sbjct: 309 KSVFRSDWYNY--GIKPKR---DAWRFLRACILMPFLVMLHAFMP--TKGTTMCVPLARF 361
Query: 409 LCHSASYFMFLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLI 468
+ H Y +FL IL T W S + + +E + A+V GL
Sbjct: 362 IAHITMYLVFLIAAILR----PTIGFYFAWTDSIEVTV-------QALEIFMYAYVMGLA 410
Query: 469 WSEVKQLWDMGLREYVHDMWNVIDFVTNSLYVATVALRIVSHYQVRREMAMGLQWNQPRE 528
+ + +G + W D +++ +L + +RE A + R
Sbjct: 411 LEKGILFYRVGRDGFFAFWWRWFDAAL--IFIFLFSLIFFTGKWGKRE-AFDPS-SVDRM 466
Query: 529 KWDAWDPMLLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILV 588
W +++ LL E + A + S LK Y + +G +S+ + V + ++ + +
Sbjct: 467 HWPSFEFSLLHEICLAIACVLSILKCFYYAQMMKSIGGSVISVGKCVGKTYTYILIMVAI 526
Query: 589 IFAFSCGLNQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFG 648
I +FS GLN ++ Y + + +G T D+ + + + + LFW+ FG
Sbjct: 527 IVSFSVGLNIIVDPY--LNRSTMKIGDQDYTKTT----DS---YETIGTSSKNLFWSIFG 577
Query: 649 LVDLDSF---------ELDGIK-IFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLI 698
+ +F +D +K ++ Y +
Sbjct: 578 YLGPSTFTTVVGNTGPNMDPVKHTLNSSTFEILAAVYHGILIITVLNLMTSILVKGADEV 637
Query: 699 SERADVEWKFARSKLWISYFEEGGTAPPPFNVL 731
+ ++E+KF R+ ++ + APPP N++
Sbjct: 638 LDNEEMEFKFTRAAIYSEFLSWEMAAPPPLNLI 670
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 87.8 bits (208), Expect = 3e-17
Identities = 116/573 (20%), Positives = 229/573 (39%), Gaps = 58/573 (10%)
Query: 175 FTSDITPLILAAHRDSYEIIKLLLDRGAQLPEPHDVRCGCDDCVRSRREDSLRHSRSR-I 233
F +TPL+LA +++ I++ L+ RG + PH + C C C +RE HS +R +
Sbjct: 140 FPPHMTPLMLACILNNFSIVQCLITRGHCIQIPHFITCECKTC---KRETVTTHSSTRLV 196
Query: 234 NAYRXXXXXXXXXXXXKDPILTAFELSWELRRLSALEH-EFKTEYQELRVQCQEFATALL 292
+ R D ++ +L++L++ + E+ Y++L + Q F +
Sbjct: 197 DVMRALSSEAYLWLATDDVFAATCAVARDLQQLASDDQLEYVETYRDLEMNVQRFLCRIS 256
Query: 293 DHTRTSNELQILLNHEKGASPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLL 352
D +E +++ + + P+ +TE +P RL++A+ + ++F N Q +
Sbjct: 257 DQAWRVDEFNMMVAN-RNYCPER-MTEISSP------RLQMAMDSQMRQFTCSTNSQTTI 308
Query: 353 ASI----WYESVPGFRRKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAVGRTLRKPFIKF 408
S+ WY G + K A +R + P + + P G T+ P +F
Sbjct: 309 KSVFRSDWYNY--GIKPKR---DAWRFLRACILMPFLVMLHAFMP--TKGTTMCVPLARF 361
Query: 409 LCHSASYFMFLFLLILASQRIETAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLI 468
+ H Y +FL IL T W S + + +E + A+V GL
Sbjct: 362 IAHITMYLVFLIAAILR----PTIGFYFAWTDSIEVTV-------QALEIFMYAYVMGLA 410
Query: 469 WSEVKQLWDMGLREYVHDMWNVIDFVTNSLYVATVALRIVSHYQVRREMAMGLQWNQPRE 528
+ + +G + W D +++ +L + +RE A + R
Sbjct: 411 LEKGILFYRVGRDGFFAFWWRWFDAAL--IFIFLFSLIFFTGKWGKRE-AFDPS-SVDRM 466
Query: 529 KWDAWDPMLLSEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILV 588
W +++ LL E + A + S LK Y + +G +S+ + V + ++ + +
Sbjct: 467 HWPSFEFSLLHEICLAIACVLSILKCFYYAQMMKSIGGSVISVGKCVGKTYTYILIMVAI 526
Query: 589 IFAFSCGLNQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFG 648
I +FS GLN ++ Y + + +G T D+ + + + + LFW+ FG
Sbjct: 527 IVSFSVGLNIIVDPY--LNRSTMKIGDQDYTKTT----DS---YETIGTSSKNLFWSIFG 577
Query: 649 LVDLDSF---------ELDGIK-IFTRFWGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLI 698
+ +F +D +K ++ Y +
Sbjct: 578 YLGPSTFTTVVGNTGPNMDPVKHTLNSSTFEILAAVYHGILIITVLNLMTSILVKGADEV 637
Query: 699 SERADVEWKFARSKLWISYFEEGGTAPPPFNVL 731
+ ++E+KF R+ ++ + APPP N++
Sbjct: 638 LDNEEMEFKFTRAAIYSEFLSWEMAAPPPLNLI 670
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 86.6 bits (205), Expect = 8e-17
Identities = 122/497 (24%), Positives = 202/497 (40%), Gaps = 71/497 (14%)
Query: 252 PILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRTSNELQILLNHEKGA 311
PI TA +LS R +S E E + + V + A LL T T +LL +
Sbjct: 1353 PIETAVKLSALYRDMSEKEKERAKDLLNVAVFSENMAVELLGITATEYNAALLLKAKDNR 1412
Query: 312 SPQAPLTEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFRRKNMLLQ 371
PL L + I+ QK+ V++ +VQ+ L +W V K +
Sbjct: 1413 G--RPL-------------LDVLIENEQKEVVSYASVQRYLTEVWTARVDWSFGKFVAFS 1457
Query: 372 AAEMVRIGAMFPLYSLAYIAAP-HSAVGRTLRKPFIKFLCHSASYFMFLFLLILASQRIE 430
++ A F Y + P S +GR P IKF+CH S+ F LL + I
Sbjct: 1458 LFVLICPPAWF------YFSLPLDSRIGRA---PIIKFVCHIVSHVYFTILLTIVVLNIT 1508
Query: 431 TAPGGLLWDVSHDEPLSRRGSMPSIVEWLILAWVSGLIWSEVKQLWD-MGLREYVHDMWN 489
+++V+ +P+ VEWL+L W+SG + SE+ + GL
Sbjct: 1509 HK----MYEVT--------SVVPNPVEWLLLLWLSGNLVSELSTVGGGSGLG-------- 1548
Query: 490 VIDFVTNSLYVATVALRIVSHYQVRREMAMGLQWNQPREKWDAWDPML-LSEGLFSAANI 548
+ L + A+ I H A+ L EK ML L LF+ A +
Sbjct: 1549 ----IVKVLILVLSAMAIAVHVLAFLLPAVFLTHLDNDEKLHFARTMLYLKNQLFAFALL 1604
Query: 549 FSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLW-YYADME 607
F+ ++ + +V+ GP + + ++ D+ +F V+ +L + F+ + + Y ++
Sbjct: 1605 FAFVEYLDFLTVHHLFGPWAIIIRDLMYDLARFLVILMLFVAGFTLHVTSIFQPAYQPVD 1664
Query: 608 KKRCTVGTALTPNGTLPDPDACVVWRRLFETMQTLFWAAFGLVDLDSFE-LDGIKIFTRF 666
+ + +P+ +T++ LF++ FGLV+ DS L + F +
Sbjct: 1665 EDSAELMRLASPS----------------QTLEMLFFSLFGLVEPDSMPPLHLVPDFAKI 1708
Query: 667 WGMLMFGTYXXXXXXXXXXXXXXXXXHSYQLISERADVEWKFARSKLWISYFEEGGTAPP 726
L+FG Y +YQ I ++D EWKF R+ L I + P
Sbjct: 1709 ILKLLFGIYMMVTLIVLINLLIAMMSDTYQRIQAQSDKEWKFGRAIL-IRQMNKKSATPS 1767
Query: 727 PFNVLPSPKSLL-YAWR 742
P N+L +L AWR
Sbjct: 1768 PINMLTKLIIVLRVAWR 1784
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 36.7 bits (81), Expect = 0.084
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 397 VGRTLRKPFIKFLCHSASYFMFLFLLIL----ASQRIETAPGGLLWDVSHDEPLSRRGSM 452
+ R R + F ++A+ +F + +L AS + T P + +D+ + + G+
Sbjct: 265 IDRGSRAIIVDFALYNANINLFCVVKLLFELPASGGVITTPKLMTYDLLTYQ--TSGGTR 322
Query: 453 PSIVEWLILAWVSGLIWSEVKQLWDMGLREYVHDMWNVIDFVTNSLYVATVALRI----V 508
I E + ++ I+ E+ + L Y+ WN++D V VAT+ L +
Sbjct: 323 MMIFEGIFCGFILYFIFEELFAIGRHRLH-YLTQFWNLVDVVLLGFSVATIILSVNRTKT 381
Query: 509 SHYQVRREMAMGLQWNQPREKWDAWDPMLLSEGLFSAANIFSSLKLVYIF-SVNPHLGPL 567
+V + GL N P + + + L+ A +F + V+ F SVN + L
Sbjct: 382 GVNRVNSVIENGLT-NAPFDDVTSSENSYLN---IKACVVFVAWVKVFKFISVNKTMSQL 437
Query: 568 QVSLSRMVLDILKFFVLDILVIFAFS 593
+L+R DI F V+ + FAF+
Sbjct: 438 SSTLTRSAKDIGGFAVMFAVFFFAFA 463
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 331 LKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFRRKNMLLQAAEMVRIGAMFPLY 385
L LA+ K F+AHP Q LLA +W+ S+ N+ + A + +F Y
Sbjct: 743 LSLAVLANTKTFLAHPCCQILLAELWHGSLKVRSGSNVRVLTALICPPAILFMAY 797
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 32.3 bits (70), Expect = 1.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 331 LKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFRRKNMLLQAAEMVRIGAMFPLY 385
L LA+ K F+AHP Q LLA +W+ S+ N+ + A + +F Y
Sbjct: 459 LSLAVLANTKTFLAHPCCQILLAELWHGSLKVRSGSNVRVLTALICPPAILFMAY 513
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 791 VNEIKQDVSAFRCELVEILRNSGMNTSTANAGAPEVMMLRAGGGGGKKNRQKER 844
V +K AF+ E L NS TST V ML GGGGGKK +R
Sbjct: 213 VFSMKDGKYAFKTECRSCLENSSRPTSTM-----WVNMLARGGGGGKKTAMGQR 261
>U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase II,
second largestsubunit protein.
Length = 859
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 791 VNEIKQDVSAFRCELVEILRNSGMNTSTANAGAPEVMMLRAGGGGGKKNRQKER 844
V +K AF+ E L NS TST V ML GGGGGKK +R
Sbjct: 14 VFSMKDGKYAFKTECRSCLENSSRPTSTM-----WVNMLARGGGGGKKTAMGQR 62
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5 protein.
Length = 2032
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 331 LKLAIKLRQKKFVAHPNVQQLLASIWY 357
L LA+ + K F+AHP Q LLA +W+
Sbjct: 1053 LALAVIVNNKHFLAHPCCQILLADLWH 1079
>Z80219-5|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5 protein.
Length = 2032
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 331 LKLAIKLRQKKFVAHPNVQQLLASIWY 357
L LA+ + K F+AHP Q LLA +W+
Sbjct: 1053 LALAVIVNNKHFLAHPCCQILLADLWH 1079
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 331 LKLAIKLRQKKFVAHPNVQQLLASIWY 357
L LA+ + K F+AHP Q LLA +W+
Sbjct: 992 LALAVIVNNKHFLAHPCCQILLADLWH 1018
>Z99281-16|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 555 VYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLWYYA 604
VYIFS+ LG V LS + D++ F++ LV FA + G + W YA
Sbjct: 136 VYIFSIL--LGVPSVILSAALNDVMSFYIFRFLVGFAIA-GTLTVGWTYA 182
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 30.7 bits (66), Expect = 5.5
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 129 ETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPETATF-TSDITPLILAAH 187
E R A+ A++E +E V+A+ D + T G + P + + T TP +LAA
Sbjct: 319 ECRTAMYLAVAEGHLEVVKAMTDFK-CTSIDGR----QRCPFQLDVYCTRGRTPFMLAAF 373
Query: 188 RDSYEIIKLLLDRGAQLPEP 207
+ ++ LLLD GA + P
Sbjct: 374 NQNLPLMTLLLDAGADVNLP 393
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 30.7 bits (66), Expect = 5.5
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 129 ETRDALLHAISEEFVEAVEALLDHEERTRKPGEPNSWEALPPETATF-TSDITPLILAAH 187
E R A+ A++E +E V+A+ D + T G + P + + T TP +LAA
Sbjct: 317 ECRTAMYLAVAEGHLEVVKAMTDFK-CTSIDGR----QRCPFQLDVYCTRGRTPFMLAAF 371
Query: 188 RDSYEIIKLLLDRGAQLPEP 207
+ ++ LLLD GA + P
Sbjct: 372 NQNLPLMTLLLDAGADVNLP 391
>AL110487-12|CAB54422.1| 148|Caenorhabditis elegans Hypothetical
protein Y39E4B.13 protein.
Length = 148
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 797 DVSAFRCELVEILRNSGMNTSTANAGAPEVMMLRAGGGGGKK 838
D+ + + E V+I R+ M + A GAP GGGGG+K
Sbjct: 98 DIESIQSEKVQI-RDKKMKSKLAAPGAPPKPAQSPGGGGGEK 138
>Z68750-4|CAA92968.3| 256|Caenorhabditis elegans Hypothetical
protein K01A6.5 protein.
Length = 256
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 583 VLDILVIFAFSCGLNQLLWYYADMEKKRCTVGTALTPNGTLPDPDACVVWRRLFETMQ 640
++ I ++FA SC N L + A +K++ +TP G P P C R+ E Q
Sbjct: 4 IIVISMLFAISC--NSFLVFCAKFKKEKKDTTLEITPPGITPQPQ-CSRQSRMTEVQQ 58
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 547 NIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLWYYAD 605
++ SLKLV SV LGP ++ M+ ++ VL + ++AF + + Y D
Sbjct: 1188 SVIWSLKLVDYLSVQQGLGPYINIVAEMIPTMIPLCVLVFITLYAFGLLRQSITYPYED 1246
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 547 NIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLWYYAD 605
++ SLKLV SV LGP ++ M+ ++ VL + ++AF + + Y D
Sbjct: 1188 SVIWSLKLVDYLSVQQGLGPYINIVAEMIPTMIPLCVLVFITLYAFGLLRQSITYPYED 1246
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 547 NIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLWYYAD 605
++ SLKLV SV LGP ++ M+ ++ VL + ++AF + + Y D
Sbjct: 1175 SVIWSLKLVDYLSVQQGLGPYINIVAEMIPTMIPLCVLVFITLYAFGLLRQSITYPYED 1233
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,016,014
Number of Sequences: 27539
Number of extensions: 926841
Number of successful extensions: 2610
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2513
Number of HSP's gapped (non-prelim): 59
length of query: 1024
length of database: 12,573,161
effective HSP length: 89
effective length of query: 935
effective length of database: 10,122,190
effective search space: 9464247650
effective search space used: 9464247650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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