Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001084-TA|BGIBMGA001084-PA|IPR003701|DNA repair
exonuclease, IPR004843|Metallophosphoesterase, IPR007281|Mre11,
DNA-binding
(628 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 402 e-111
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 402 e-111
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 402 e-111
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 402 e-111
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 402 e-111
U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11 pr... 401 e-111
BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for IM... 399 e-110
BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic recombina... 233 1e-60
BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein. 233 1e-60
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 32 5.3
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 32 5.3
L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein. 32 7.0
BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1 ... 32 7.0
AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical rhabdomyos... 32 7.0
AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1 ... 32 7.0
D88575-1|BAA31232.1| 380|Homo sapiens TP55 protein. 31 9.3
BC106744-1|AAI06745.1| 380|Homo sapiens serpin peptidase inhibi... 31 9.3
BC106743-1|AAI06744.1| 380|Homo sapiens serpin peptidase inhibi... 31 9.3
BC069547-1|AAH69547.1| 380|Homo sapiens serpin peptidase inhibi... 31 9.3
BC069442-1|AAH69442.1| 380|Homo sapiens serpin peptidase inhibi... 31 9.3
BC069417-1|AAH69417.1| 380|Homo sapiens serpin peptidase inhibi... 31 9.3
AF027866-1|AAC64506.1| 380|Homo sapiens megsin protein. 31 9.3
>BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 402 bits (991), Expect = e-111
Identities = 215/527 (40%), Positives = 309/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 402 bits (991), Expect = e-111
Identities = 215/527 (40%), Positives = 309/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 11
protein.
Length = 708
Score = 402 bits (991), Expect = e-111
Identities = 215/527 (40%), Positives = 309/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11
protein.
Length = 708
Score = 402 bits (991), Expect = e-111
Identities = 215/527 (40%), Positives = 309/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and
repair protein protein.
Length = 708
Score = 402 bits (991), Expect = e-111
Identities = 215/527 (40%), Positives = 309/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11
protein.
Length = 680
Score = 401 bits (987), Expect = e-111
Identities = 214/527 (40%), Positives = 308/527 (58%), Gaps = 18/527 (3%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D RG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAARGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRC 478
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D + +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT 481
Query: 479 IAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 520
L E + E +I E++ E ++ +E DDE + A A
Sbjct: 482 QRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for
IMAGE:4687479) protein.
Length = 517
Score = 399 bits (982), Expect = e-110
Identities = 203/469 (43%), Positives = 288/469 (61%), Gaps = 13/469 (2%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGH 242
D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DLV+WGH
Sbjct: 186 DERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGH 245
Query: 243 EHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ 302
EH+ I P K E+ F++ QPGS+V TSL+ GEA+ KH GLL I + +PL
Sbjct: 246 EHECKIAP---TKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLH 302
Query: 303 TVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPL 360
TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP PL
Sbjct: 303 TVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPL 362
Query: 361 IRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDMTGVA 420
+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 363 VRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKLITKP 421
Query: 421 AEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVL 467
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 422 SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAI 470
>BT006730-1|AAP35376.1| 206|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 206
Score = 233 bits (571), Expect = 1e-60
Identities = 110/200 (55%), Positives = 142/200 (71%), Gaps = 4/200 (2%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDE 203
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
>BC005241-1|AAH05241.1| 206|Homo sapiens MRE11A protein protein.
Length = 206
Score = 233 bits (571), Expect = 1e-60
Identities = 110/200 (55%), Positives = 142/200 (71%), Gaps = 4/200 (2%)
Query: 8 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 67
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 123
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 124 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK 183
HGNHDDP G ++ +LDILS G VN+FG+ + ISPVLLQKG T++ALYGL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 184 DQRLSRLFAEKKVEMERPDE 203
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 32.3 bits (70), Expect = 5.3
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 428 SLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTA 487
+LL A D+ +S +S+ I + + +DVL F + K + ++ LL
Sbjct: 509 TLLEAQNRTGEADREVSEISIVDIANKRSSSAEESGQDVLENTF-SQKHKELSVLLLEMK 567
Query: 488 ETEKEIAE-QLEVCKRELDEADDEKL 512
E ++EIA +L++ + +EAD E L
Sbjct: 568 EAQEEIAFLKLQLQGKRAEEADHEVL 593
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372
protein.
Length = 3225
Score = 32.3 bits (70), Expect = 5.3
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 428 SLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTA 487
+LL A D+ +S +S+ I + + +DVL F + K + ++ LL
Sbjct: 475 TLLEAQNRTGEADREVSEISIVDIANKRSSSAEESGQDVLENTF-SQKHKELSVLLLEMK 533
Query: 488 ETEKEIAE-QLEVCKRELDEADDEKL 512
E ++EIA +L++ + +EAD E L
Sbjct: 534 EAQEEIAFLKLQLQGKRAEEADHEVL 559
>L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein.
Length = 655
Score = 31.9 bits (69), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 314 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 348
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 462 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 496
>BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1
protein.
Length = 655
Score = 31.9 bits (69), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 314 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 348
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 462 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 496
>AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.2A protein.
Length = 407
Score = 31.9 bits (69), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 314 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 348
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 261 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 295
>AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1
variant protein.
Length = 462
Score = 31.9 bits (69), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 314 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 348
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 269 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 303
>D88575-1|BAA31232.1| 380|Homo sapiens TP55 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>BC106744-1|AAI06745.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>BC106743-1|AAI06744.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>BC069547-1|AAH69547.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>BC069442-1|AAH69442.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>BC069417-1|AAH69417.1| 380|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 7 protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
>AF027866-1|AAC64506.1| 380|Homo sapiens megsin protein.
Length = 380
Score = 31.5 bits (68), Expect = 9.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILS-IHGNHDDPVGQGSVSSLDILSITGLVNYFG 152
+L +++ T + ED NI+ + + HG + +G+G +SS ++ + V + G
Sbjct: 120 KLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNVIGEGGISSSAVMVLVNAVYFKG 179
Query: 153 KW 154
KW
Sbjct: 180 KW 181
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,815,724
Number of Sequences: 224733
Number of extensions: 3338175
Number of successful extensions: 10779
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 10722
Number of HSP's gapped (non-prelim): 30
length of query: 628
length of database: 73,234,838
effective HSP length: 94
effective length of query: 534
effective length of database: 52,109,936
effective search space: 27826705824
effective search space used: 27826705824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 68 (31.5 bits)
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