Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001083-TA|BGIBMGA001083-PA|IPR002110|Ankyrin,
IPR001594|Zinc finger, DHHC-type
(622 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 187 3e-48
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 94 6e-20
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 71 6e-13
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 68 4e-12
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 54 4e-08
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 51 4e-07
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 50 1e-06
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 42 3e-04
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 41 6e-04
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 41 6e-04
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 37 0.007
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 36 0.013
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 33 0.16
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 33 0.16
SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po... 31 0.48
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 28 3.4
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 28 4.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 5.9
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 5.9
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 5.9
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 187 bits (456), Expect = 3e-48
Identities = 143/474 (30%), Positives = 219/474 (46%), Gaps = 41/474 (8%)
Query: 47 ATQYGAFVRVKELVEAGW-DVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGE 105
A G VK L+ + DVN D T LHWAA+N + I ++LL GA+V+A+GG+
Sbjct: 7 AASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGGD 66
Query: 106 LQSTPLHWATRQGHLDATVLLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARGVT 165
LQ+ P+HWA ++G + LV+ GADP L+D +G CLHLA +V YL+ ++
Sbjct: 67 LQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLDIS 126
Query: 166 VDEPDAGGMTALMWASWKVAAVDP-TRLLLTLGASTQPADRGHGNTALHWAILARNTTAI 224
VD D T LMWAS+ +P T LL GA D T LHW+I+ N +
Sbjct: 127 VDLRDDQQHTPLMWASYH--GNEPITNCLLRWGADVLATDEDK-MTPLHWSIVGGNLKCM 183
Query: 225 STLILYG--DANLDVPNLRG--VTPLQML-QASADSLWVGSKVSD--KIKERTMESER-L 276
++ G NL G TP + + L+ + +S+ K+KE + E E+ +
Sbjct: 184 KLILKEGGIPCTAVTANLSGQLKTPWALASELRVSHLFKQALISNGLKVKETSEEPEKWV 243
Query: 277 SIFRRLTYDKK-FRWWCVVVMPFMAFYLTGLILETDLNYPLKTLILIGFYSLLHFTSNLL 335
+ + + +K F +C + +F +TG+ P+ ++I ++FT +
Sbjct: 244 VVPSKFQFSQKTFIIFCFL----SSFIITGVFFFIMSICPMVISLIIA-PLWIYFTFKYI 298
Query: 336 FDDELKNIFPLSIYLATKVWFYITWVVFILPVVGWSWSLGFAVCSGLLWVTFLRSWRSDP 395
NI + YL T I +F W W C LL++ P
Sbjct: 299 TTCIHANIDIVHFYLETPFLAGIFSSIFF-----WVW------CHSLLYIV--------P 339
Query: 396 GVITASKADKFRVIVNRIKGCVHITLHHCFVNM-LMGAHGGSQQTIIELSEAAGGG-FES 453
+ ++ C+ + + F N + G Q E+S+ F
Sbjct: 340 KTLPIKPLSSLLFVLISFT-CIGLYVRTAFQNPGYVDKIGAVVQRREEISKLLDKDLFNQ 398
Query: 454 SRFCSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGFLCSL 507
S +C C +P RS HC C RC+ ++DHHCPW GNC+GA NHR F+ F+ +L
Sbjct: 399 SHYCLKCFQVKPPRSYHCGACKRCINRYDHHCPWTGNCVGARNHRTFLLFVFTL 452
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 93.9 bits (223), Expect = 6e-20
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 457 CSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGF-LCSLILMCCWML 515
CS C +P RSKHC +CN CV KFDHHC W+ NC+G NN R+F F LC++ L+ +L
Sbjct: 160 CSTCKFEKPARSKHCRLCNICVEKFDHHCIWINNCVGLNNARYFFLFLLCTIQLLFHSIL 219
Query: 516 WGGARY--LRDQCPAPAEPLAW---VSCNGWISWVMLNAAFHLFWVTVLTGFQMYLVVCL 570
G + LRD P+ +W + G + V L + V L G++ +LV
Sbjct: 220 RLGYHFNALRDMRQYPSFLRSWWFAIKSEGELGSVFLISLICSVLVLCLLGYEFFLVYA- 278
Query: 571 GMTTNE 576
G TTNE
Sbjct: 279 GYTTNE 284
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 70.5 bits (165), Expect = 6e-13
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 451 FESSRFCSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGFLCSLILM 510
F ++ +C C + RP R+ HC +C+ CV DHHC W+ CIG N+R++ FL S++L
Sbjct: 178 FVNTVYCHTCHLYRPPRASHCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLSVVLS 237
Query: 511 CCWM 514
++
Sbjct: 238 ALYL 241
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 67.7 bits (158), Expect = 4e-12
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 454 SRFCSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGFLCSLILMCCW 513
SRFC C + RS HC+ CN+C+ + DHHC W NC+G NH+ F L L
Sbjct: 96 SRFCEKCQEYKCDRSHHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFYLNLYSIC 155
Query: 514 MLWGGARYLRDQCPAPAEPLAWVSCNGWISWVMLNAAFHLFWVTVLTGFQMYLVVCL--G 571
+L+ + A A +S + W L AF + V+T F Y L
Sbjct: 156 VLYSTFVAITKTFTAEG---ANISAIYLVFWGFL-FAFAVGMSIVMTAFTFYHTSLLIHN 211
Query: 572 MTTNEQLNR--GRYKHFQARGVRSPFSRGPLANCLELLGCRSP 612
++T E ++ RY H PF+ G N +++G +SP
Sbjct: 212 LSTLESMSSSWSRYTH-----STQPFNVGWYENWCQIMG-KSP 248
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 54.4 bits (125), Expect = 4e-08
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 88 IIQYLLSKGANVDAVGGELQSTPLHWATRQGHLDATVLLVRAGADPSLRD-AEGCACLHL 146
I++ L+ G N + V +T LH A R + +L++ GA+PS RD L L
Sbjct: 349 IVEELILAGFNPNEVDAS-SNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLML 407
Query: 147 AAQFGHTAVVAYLVARGVTVDEPDAGGMTAL 177
A+ G + +V+ LVA G +VDE D+ G TA+
Sbjct: 408 ASATGLSEIVSILVASGASVDEVDSSGWTAM 438
Score = 50.4 bits (115), Expect = 7e-07
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 56 VKELVEAGWDVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPLHWAT 115
V+EL+ AG++ N D + T LH A NR + ++ LL GAN A TPL A+
Sbjct: 350 VEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLAS 409
Query: 116 RQGHLDATVLLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARGVTVDEP 169
G + +LV +GA D+ G + A G+ + L + D+P
Sbjct: 410 ATGLSEIVSILVASGASVDEVDSSGWTAMEQAVVRGYLHLADKLRTQVALSDKP 463
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 51.2 bits (117), Expect = 4e-07
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 66 VNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPLHWATRQGHLDATVL 125
+ + D + T LH AA + +++YL+S+ A ++ TPLH+A +GH D V
Sbjct: 134 IRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNT-SDSYGFTPLHFALAEGHPDVGVE 192
Query: 126 LVRAGADPSLRDAEGCACLHL 146
LVRAGAD +D+E L +
Sbjct: 193 LVRAGADTLRKDSENHTALEV 213
Score = 46.8 bits (106), Expect = 9e-06
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 66 VNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPLHWATRQGHLDATV- 124
+N D + T LHWA + + I +LL + E TPL + + V
Sbjct: 30 LNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVI 89
Query: 125 --LLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARG-VTVDEPDAGGMTALMWAS 181
L+ R+ DP++ G CLH AA G ++V L + + + D G T L A+
Sbjct: 90 EELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAA 149
Query: 182 WKVAAVDPTRLLLTLGASTQPADRGHGNTALHWAI 216
V + + L++ A +D +G T LH+A+
Sbjct: 150 -AVGKIQVVKYLISQRAPLNTSD-SYGFTPLHFAL 182
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/103 (32%), Positives = 41/103 (39%)
Query: 75 TLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPLHWATRQGHLDATVLLVRAGADPS 134
T LH+AA R I+Q L K + TPLH A G + L+ A +
Sbjct: 109 TCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLN 168
Query: 135 LRDAEGCACLHLAAQFGHTAVVAYLVARGVTVDEPDAGGMTAL 177
D+ G LH A GH V LV G D+ TAL
Sbjct: 169 TSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTAL 211
Score = 30.3 bits (65), Expect = 0.83
Identities = 39/147 (26%), Positives = 54/147 (36%), Gaps = 6/147 (4%)
Query: 109 TPLHWATRQGHLDAT-VLLVRAGADPSLRDAEGCACLHLAAQFGHTA--VVAYLVARG-V 164
TPLHWA G ++ LL + P +D G L ++ V+ L+ R V
Sbjct: 39 TPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVIEELINRSDV 98
Query: 165 TVDEPDAGGMTALMWASWKVAAVDPTRLLLTLGASTQPADRGHGNTALHWAILARNTTAI 224
GG T L +A+ K + +LL G T LH A +
Sbjct: 99 DPTITTRGGQTCLHYAAGK-GRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVV 157
Query: 225 STLILYGDANLDVPNLRGVTPLQMLQA 251
LI A L+ + G TPL A
Sbjct: 158 KYLISQ-RAPLNTSDSYGFTPLHFALA 183
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 455 RFCSACLVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCIGANNHRHFIGFLCSLILMCCWM 514
R C C P RS H V RC+ KFDH+C +VG + +N + F FL C +
Sbjct: 113 RMCGTCKCWLPDRSHHSRVSMRCIRKFDHYCSFVGKDVCFSNQKFFYQFLFYGFSAACMV 172
Query: 515 L 515
L
Sbjct: 173 L 173
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 43 DIVKATQYGAFVRVKELVE-AGWDVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDA 101
D++ A + + E++E +++R D + LH A+ N ++Q ++ N +
Sbjct: 5 DLIYACRAADEELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPY-LNKEV 63
Query: 102 VGGELQS--TPLHWATRQGHLDATVLLVRAGADPSLRD 137
+ + +S T +HWA GH + LL+ AG DP +++
Sbjct: 64 INAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIKN 101
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 134 SLRDAEGCACLHLAAQFGHTAVVAYLV--ARGVTVDEPDAGGMTALMWASWKVAAVDPTR 191
S RD G + LH+A+ GH AVV ++ ++ + G TA+ WA+ A + +
Sbjct: 30 SRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHA-EICK 88
Query: 192 LLLTLG 197
LLL G
Sbjct: 89 LLLEAG 94
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 170 DAGGMTALMWASWKVAAVDPTRLLLTLGASTQPADRGHGNTALHWAILARNTTAISTLIL 229
D G + L AS +++ L A GNTA+HWA L I L+L
Sbjct: 33 DENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAAL-NGHAEICKLLL 91
Query: 230 YGDANLDVPNLRGVTPLQML----QASADSLWVGSKVSDKIKERTMESERL 276
+ + N+ +P+ Q L++ +++ +E T + E+L
Sbjct: 92 EAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFLDFEIAKGSEENTGDEEKL 142
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 108 STPLHW-ATRQGHLDATVLLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARGVTV 166
+TP W A G D + + +G P+ D G +H A +GH+ ++ LV RG +
Sbjct: 4 TTPNIWIAASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDI 63
Query: 167 DEPDAGGMTAL 177
+ D G T L
Sbjct: 64 NIRDQDGETPL 74
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 59 LVEAGWDVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDAVG 103
L AG DVN+ D T LH+A++ + +DI LLS GA D +G
Sbjct: 881 LCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIG 925
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 111 LHWATRQGHLDATVLLVRAGADPSLRDAEGCACLHLAAQFGHTAVVAYLVARGVTVDEPD 170
LH G +A+ L AG D + RDA G LH A+ + H + L++ G D
Sbjct: 866 LHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIG 925
Query: 171 AGG 173
A G
Sbjct: 926 ASG 928
Score = 34.3 bits (75), Expect = 0.051
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 43 DIVKATQYGAFVRVKELVEAGW-DVNRPDGETVTLLHWAAINNRRDIIQYLLSKGANVDA 101
D V++T AF V + D + + +LLH A + +L + G +V+
Sbjct: 831 DSVESTILAAFALVTDTTTPYLSDFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNK 890
Query: 102 VGGELQSTPLHWATRQGHLDATVLLVRAGADPSLRDAEG 140
L TPLH+A+ H D V L+ GA P + A G
Sbjct: 891 RDA-LGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASG 928
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 64 WDVNRP-DGETVTLLHWAAINNRRDIIQYLLSKGANVDAVGGELQSTPL 111
WDVN D + T LHWAA +++ LL GANV AV LQ T L
Sbjct: 227 WDVNAGIDEDGHTALHWAAAMGNLEMMHALLQAGANVVAV-NYLQQTSL 274
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 75 TLLHWAAINNRRDIIQYLLSKGANVDAVGG--ELQSTPLHWATRQGHLDATVLLVRAGAD 132
+LL + + N ++ + ++ D G E T LHWA G+L+ L++AGA+
Sbjct: 203 SLLDYFLLPNTTQPPDFVYDRPSDWDVNAGIDEDGHTALHWAAAMGNLEMMHALLQAGAN 262
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 36.3 bits (80), Expect = 0.013
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 66 VNRPDGETVTLLHWAAINNRRDIIQYLLS-KGANVDAVGGELQSTPLHWATRQGHLDATV 124
+N+ D T+LH A N+ ++ LL KG +V E T LH A G+L+A
Sbjct: 45 INQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAAS 104
Query: 125 LLVRAGADPSLR 136
LL+ DPS R
Sbjct: 105 LLL--SKDPSFR 114
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 108 STPLHWATRQGHLDATVLLVRAGADPSLRDAEG 140
STPLH+A Q + L+R GADP++ + G
Sbjct: 434 STPLHYAVTQKNAKLVAKLLRNGADPAMLNGNG 466
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 109 TPLHWATRQGHLDATVLLVRAGAD 132
T LHWA GH++ LL+RA AD
Sbjct: 250 TSLHWACSMGHIEMIKLLLRANAD 273
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 208 GNTALHWAILARNTTAISTLILYGDANLDVPNLRGVTPL 246
G+T+LHWA + I L+L +A++ V N TPL
Sbjct: 248 GHTSLHWACSMGHIEMIK-LLLRANADIGVCNRLSQTPL 285
>SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 562
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 357 YITWVVFILPVVGWSWSLGFAVCSGLLWVTFLRSW 391
Y+ +VV +L + +W + ++ L W+TF+ SW
Sbjct: 98 YVPFVVTLLIPIDVTWDVSLSIWRFLYWLTFVLSW 132
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 452 ESSRFCSAC-LVRRPLRSKHCAVCNRCVAKFDHHCPWVG 489
+S C AC LV+R L K+ + ++C + F+ +C W G
Sbjct: 567 DSFAVCVACALVQRSLERKNMSTPSQCASCFNQYC-WNG 604
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 283 TYDKKFRWWCVVVMPFMAFYLTGLILETD---LNYPLKTLI--LIGFYSLLHFTSNLLFD 337
T+D W +V FMA+ T LE D N PL T + LI + + ++
Sbjct: 310 TFDHCNNWIAIVTRNFMAYIETKRKLEFDSIPFNCPLITQLFPLISSPKEMAWLLLIVCT 369
Query: 338 DELKNIFPLSIYLATK 353
D ++ FP+ Y+ TK
Sbjct: 370 DSNESWFPVHAYINTK 385
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 65 DVNRPDGETVTLLHWAAINNRRDIIQYLL 93
DVN D T LH AA+ R+DI++ LL
Sbjct: 81 DVNAYDKNKNTPLHLAAMAGRQDIVEALL 109
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 77 LHWAAINNRRDIIQYLLSKGAN 98
LHWAA + ++Q L+ KGAN
Sbjct: 361 LHWAAAVAKMPLLQALIHKGAN 382
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 452 ESSRFCSAC-LVRRPLRSKHCAVCNRCVAKFDHHCPWVGNCI 492
+S C AC +++R L K+ + ++C + F+ +C W G +
Sbjct: 539 DSFAVCLACAMIQRSLERKNMSTPSQCSSCFEQYC-WNGTTV 579
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.138 0.463
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,757,105
Number of Sequences: 5004
Number of extensions: 111896
Number of successful extensions: 342
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 282
Number of HSP's gapped (non-prelim): 47
length of query: 622
length of database: 2,362,478
effective HSP length: 77
effective length of query: 545
effective length of database: 1,977,170
effective search space: 1077557650
effective search space used: 1077557650
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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