GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001083-TA|BGIBMGA001083-PA|IPR002110|Ankyrin,
IPR001594|Zinc finger, DHHC-type
         (622 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    26   0.80 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              24   4.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    24   4.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   5.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 156 VAYLVARGVTVDEPDAGGMTALMWASWKVAAVDP 189
           + YL    V V+ PD   M AL W  W  +A++P
Sbjct: 324 ILYLATPFVPVEPPDIL-MPALTWLGWINSAINP 356


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 418 HITLHHCF 425
           HITLHHC+
Sbjct: 103 HITLHHCY 110


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 418 HITLHHCF 425
           HITLHHC+
Sbjct: 103 HITLHHCY 110


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 313 NYPLKTLILIGFYSLLHFTSNLLF 336
           N+P  + ILI ++  L+F S + F
Sbjct: 10  NFPSTSFILINYFIFLYFNSLVRF 33


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.138    0.463 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,107
Number of Sequences: 429
Number of extensions: 7484
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 622
length of database: 140,377
effective HSP length: 62
effective length of query: 560
effective length of database: 113,779
effective search space: 63716240
effective search space used: 63716240
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 46 (22.6 bits)