Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001082-TA|BGIBMGA001082-PA|IPR005301|Mob1/phocein,
IPR009078|Ferritin/ribonucleotide reductase-like
(182 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 96 1e-20
AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical ... 93 1e-19
Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical pr... 81 3e-16
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 31 0.37
U29614-7|AAA68808.1| 121|Caenorhabditis elegans Neuropeptide-li... 29 2.6
Z11505-6|CAA77586.2| 425|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 190 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 222
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 130 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 189
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 190 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 222
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 104 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 163
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 164 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 196
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 94 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 153
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 154 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 186
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 121 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 180
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 181 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 213
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 71 QLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWYDERG 130
++ LP G++ EW+A + L LF+HVN + GT+SE CT +CP M+ PG + DERG
Sbjct: 80 KITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAIYTDERG 139
Query: 131 KKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
K+ A QY+D V+T + E +FPTKYG
Sbjct: 140 KRQVYPAVQYIDCVITQCESMSRQEEIFPTKYG 172
>AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical
protein T12B3.4 protein.
Length = 292
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 67 LDMRQLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEFCTAATCPDMTGPGGRSYAWY 126
+D+R V LP ++++WLA HT+ F+ +NL+YGT+S+ CT +CP M G Y W
Sbjct: 102 VDLRHAVKLPPSENFDDWLAVHTVDFFNRINLMYGTISDVCTRESCPTMCGGSRYEYLWQ 161
Query: 127 D--ERGKKSRVAAPQYVDYVMTYTQKTVNDETVFPT 160
D E K +R+ APQY+ +M + + +NDE +FP+
Sbjct: 162 DGIEYKKPTRLPAPQYMQLLMDWIEVRINDEHIFPS 197
>Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical
protein F38H4.10 protein.
Length = 193
Score = 81.4 bits (192), Expect = 3e-16
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 68 DMRQLVDLPHGLDYNEWLASHTLALFDHVNLVYGTVSEF-CTAATCPDMTGPGGRSYAWY 126
++R + LP G D NEWLA + + L + V +V+G + E CT + CP MT G R Y W
Sbjct: 21 NLRDALKLPPGEDKNEWLAVNIIDLVNQVRMVFGVLCESECTDSKCPSMTAHG-RQYTWT 79
Query: 127 DERGKKSRVAAPQYVDYVMTYTQKTVNDETVFPTKYG 163
E G +APQY+D +T Q V+DE VFP++ G
Sbjct: 80 SE-GTLLNTSAPQYIDLSLTACQNNVDDENVFPSEIG 115
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 34 ISRKARRKEREGEPAGDPKLYLQEALLERKLPELDMRQLVDLPHGLDYNEWLASHTLALF 93
+S++ R +E++ + AGD LQ+ + ++ L D+ + +D E L T L
Sbjct: 222 LSKEQRDREKDSKTAGDGIQRLQDMIRQQDLARQDIMNNLSKKGDVD-KEKLNEETRRLN 280
Query: 94 DHVNLVYGTVSEFCT 108
D +NL+ V++ T
Sbjct: 281 DKINLITSEVTKKMT 295
>U29614-7|AAA68808.1| 121|Caenorhabditis elegans
Neuropeptide-like protein protein 7 protein.
Length = 121
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 4 AVVLGVLFSLPSYLYSAVPSRTNELSSID-WISRKARRKEREGEPAGDPKLYLQEALLER 62
A+++ VLF + S + SA+ + + + S +R E EP PK Y + R
Sbjct: 6 ALLIVVLFGVASQITSALYLKQADFDDPRMFTSSFGKRSAIESEPQAYPKSYRAIRIQRR 65
Query: 63 KLPELDMRQLVDLPHG 78
+ +LD +L+ + G
Sbjct: 66 SMDDLDDPRLMTMSFG 81
>Z11505-6|CAA77586.2| 425|Caenorhabditis elegans Hypothetical
protein F59B2.9 protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 13 LPSYLYSAVPSRTNELSSIDWISRKARRKEREGEPAGDPKLYLQEALLERKLP-ELDMRQ 71
L +++ RT+ L + WI +K E P LY Q + R P E + +
Sbjct: 317 LATFVVEQQEDRTHILYFLVWIELFPEKKRLENLPKTLGPLYKQLEKINRDYPDESSLER 376
Query: 72 LVDLPHGLDYNEWLASH 88
L+ P+ L Y E+L ++
Sbjct: 377 LLSNPN-LVYTEFLETY 392
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,905,089
Number of Sequences: 27539
Number of extensions: 203816
Number of successful extensions: 374
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 363
Number of HSP's gapped (non-prelim): 11
length of query: 182
length of database: 12,573,161
effective HSP length: 77
effective length of query: 105
effective length of database: 10,452,658
effective search space: 1097529090
effective search space used: 1097529090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -