Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001079-TA|BGIBMGA001079-PA|IPR003961|Fibronectin, type
III, IPR000242|Tyrosine specific protein phosphatase,
IPR003595|Protein tyrosine phosphatase, catalytic region,
IPR008957|Fibronectin, type III-like fold, IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase
(977 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.009
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 33 0.009
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 31 0.060
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 25 4.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 4.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 9.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 9.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.5 bits (73), Expect = 0.009
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 20 TLLVLWQPP---YPPGAYTHYKVSIEPPDARDSVLYVEKEGEPPGPAQAAFKGLVPGRAY 76
+L V WQPP + G YK+ EP A E E GL Y
Sbjct: 1127 SLQVSWQPPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVRKTSALTTVLTGLRKYTNY 1186
Query: 77 NISVQTVSEPEISAPTTAKY----RTVPLRPRNVTAPPDDLRETAFRVTWLPPLE 127
I V + PTT Y VP P ++ + A ++WLPPLE
Sbjct: 1187 TIQVLAFTRVGDGVPTTVTYCQTEEDVPGSPADIKVVVSSPQ--ALFISWLPPLE 1239
Score = 28.7 bits (61), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 368 HRMLKPVRPLAATRLWVERASSNSALVQWRGPPPARSVLGHYALRYRT 415
H L P +A L+V ++S+S L+ W+ + L Y L YRT
Sbjct: 1396 HYTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYTLHYRT 1443
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 5 PNTPGKFIVWFRNETTLLVLWQPPYPP-GAYTHYKVSIEPPDARDSV 50
P +P V + L + W PP P G T Y + D R+ +
Sbjct: 1214 PGSPADIKVVVSSPQALFISWLPPLEPNGIITKYNLYTRVVDGREEL 1260
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 33.5 bits (73), Expect = 0.009
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Query: 20 TLLVLWQPP---YPPGAYTHYKVSIEPPDARDSVLYVEKEGEPPGPAQAAFKGLVPGRAY 76
+L V WQPP + G YK+ EP A E E GL Y
Sbjct: 1123 SLQVSWQPPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVRKTSALTTVLTGLRKYTNY 1182
Query: 77 NISVQTVSEPEISAPTTAKY----RTVPLRPRNVTAPPDDLRETAFRVTWLPPLE 127
I V + PTT Y VP P ++ + A ++WLPPLE
Sbjct: 1183 TIQVLAFTRVGDGVPTTVTYCQTEEDVPGSPADIKVVVSSPQ--ALFISWLPPLE 1235
Score = 28.7 bits (61), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 368 HRMLKPVRPLAATRLWVERASSNSALVQWRGPPPARSVLGHYALRYRT 415
H L P +A L+V ++S+S L+ W+ + L Y L YRT
Sbjct: 1392 HYTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYTLHYRT 1439
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 5 PNTPGKFIVWFRNETTLLVLWQPPYPP-GAYTHYKVSIEPPDARDSV 50
P +P V + L + W PP P G T Y + D R+ +
Sbjct: 1210 PGSPADIKVVVSSPQALFISWLPPLEPNGIITKYNLYTRVVDGREEL 1256
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 30.7 bits (66), Expect = 0.060
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 60 PGPAQ--AAFKGLVPGRAYNISVQTVSEPEISAPTTAKYRTVPLRPRNVTAPP-----DD 112
PG Q A L P Y++ + V+E EI A + T+ + PP DD
Sbjct: 930 PGSQQNVAGVFNLRPATTYHLRI--VAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDD 987
Query: 113 LRETAFRVTWLPPLEE 128
L + +VTW PP E
Sbjct: 988 LDQHTLKVTWKPPPRE 1003
Score = 25.4 bits (53), Expect = 2.3
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 5 PNTPGKFIVWFRNETTLLVLWQPP-YPPGAYTHYKVSIEPPDARD 48
P P + ++LV W+PP P G T Y V + +A +
Sbjct: 1180 PEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKADNAEE 1224
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 24.6 bits (51), Expect = 4.0
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 305 SDVNSRQTRYVLRYRARVPEPGPPAEWRQLRTEDTSALLADLFPGAVYE 353
SDV R V ++ EP ++ + + AL+ +L+PG VY+
Sbjct: 125 SDVTERDNHLVNAFKTLTQEPKNTNKFLE---KGPVALINELYPGVVYK 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.6 bits (51), Expect = 4.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 340 SALLADLFPGAVYEIELAAMSHDLPSEAHRMLKPV 374
S L+A FPGA E + DL S +R+++PV
Sbjct: 6 SCLVAP-FPGASANSEAKRLYDDLLSNYNRLIRPV 39
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.4 bits (48), Expect = 9.1
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 790 EKCDRYWPYDTRPVYYGDIAVTA 812
+ CDR W DT + G+ + A
Sbjct: 136 DSCDRLWVLDTGTIGIGNTTIQA 158
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 9.1
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 1 MVIKPNTPGKFIVWFRNETTL----LVLWQPPYPPGAYTHYKVSIEPPDARDSVL 51
+V+ N G + V + T+ LV+WQPP + V P D + VL
Sbjct: 115 IVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.134 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,182
Number of Sequences: 429
Number of extensions: 11860
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 16
length of query: 977
length of database: 140,377
effective HSP length: 64
effective length of query: 913
effective length of database: 112,921
effective search space: 103096873
effective search space used: 103096873
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)
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