Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001078-TA|BGIBMGA001078-PA|undefined
         (158 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 53  TINFQGLPGTKYHFM 67
           T +F GL GTKY  +
Sbjct: 365 TDDFNGLSGTKYQIL 379


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 30  YRLDYRPPEGTP 41
           +  D+RPP+ TP
Sbjct: 207 FTADFRPPQETP 218


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,961
Number of Sequences: 317
Number of extensions: 1809
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 158
length of database: 114,650
effective HSP length: 52
effective length of query: 106
effective length of database: 98,166
effective search space: 10405596
effective search space used: 10405596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)