Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001077-TA|BGIBMGA001077-PA|IPR001159|Double-stranded RNA
binding
(320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious... 99 1e-19
UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-P... 85 3e-15
UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:... 79 2e-13
UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p; ... 75 3e-12
UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious... 72 2e-11
UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3; C... 69 2e-10
UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,... 68 4e-10
UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19; Eutele... 63 8e-09
UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736 p... 63 1e-08
UniRef50_UPI0001560C6B Cluster: PREDICTED: similar to adenosine ... 62 2e-08
UniRef50_O75569 Cluster: Interferon-inducible double stranded RN... 60 1e-07
UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine ... 60 1e-07
UniRef50_O95793 Cluster: Double-stranded RNA-binding protein Sta... 58 2e-07
UniRef50_Q9I8Y6 Cluster: Double-stranded RNA adenosine deaminase... 58 4e-07
UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aed... 56 9e-07
UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella ve... 54 5e-06
UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia c... 54 6e-06
UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n... 53 9e-06
UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine ... 53 9e-06
UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3; Xenopus... 52 1e-05
UniRef50_UPI0000D57240 Cluster: PREDICTED: similar to CG12598-PA... 51 3e-05
UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gamb... 50 8e-05
UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n... 48 2e-04
UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter ox... 48 2e-04
UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2; Chlor... 48 2e-04
UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usita... 48 2e-04
UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen - A... 48 3e-04
UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanth... 48 4e-04
UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27; Epsilonproteobact... 47 6e-04
UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Stau... 46 0.001
UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein Sta... 46 0.001
UniRef50_Q56UE8 Cluster: Putative double strand RNA binding prot... 46 0.001
UniRef50_A7S1J6 Cluster: Predicted protein; n=1; Nematostella ve... 46 0.001
UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28; Alphaproteobacter... 46 0.002
UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas neptu... 45 0.002
UniRef50_A7S1J7 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.002
UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep: ... 45 0.003
UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing... 45 0.003
UniRef50_A7T6A8 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.003
UniRef50_A0NFW6 Cluster: ENSANGP00000031506; n=1; Anopheles gamb... 44 0.004
UniRef50_Q4V9C6 Cluster: Zgc:113842; n=6; Clupeocephala|Rep: Zgc... 44 0.005
UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter no... 44 0.005
UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium nucl... 44 0.005
UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, R... 44 0.007
UniRef50_Q4SKQ4 Cluster: Chromosome undetermined SCAF14565, whol... 44 0.007
UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma proteobact... 44 0.007
UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome sh... 43 0.009
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 43 0.009
UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia se... 43 0.012
UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3; Cystobacterineae... 43 0.012
UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3; Alphaproteobacte... 43 0.012
UniRef50_UPI0000DB79F1 Cluster: PREDICTED: similar to CG8273-PA;... 42 0.016
UniRef50_UPI0000EB3B4C Cluster: Double-stranded RNA-specific edi... 42 0.021
UniRef50_A1KR30 Cluster: Double stranded RNA activated protein k... 42 0.021
UniRef50_Q16P61 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding prote... 42 0.021
UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3; ... 42 0.028
UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n... 41 0.037
UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium petr... 41 0.037
UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacte... 41 0.037
UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|R... 41 0.037
UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus Protoch... 41 0.049
UniRef50_P19525 Cluster: Interferon-induced, double-stranded RNA... 41 0.049
UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1; Psych... 40 0.065
UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|R... 40 0.065
UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep... 40 0.065
UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria (c... 40 0.065
UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|R... 40 0.065
UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 40 0.085
UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces mar... 40 0.085
UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2; Magnetospirillum... 40 0.085
UniRef50_Q7Z6F6 Cluster: Interferon-inducible double-stranded RN... 40 0.085
UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Re... 40 0.085
UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep: Rib... 40 0.085
UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;... 40 0.085
UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 40 0.11
UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|R... 40 0.11
UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep: Ri... 39 0.15
UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila melanogaster|... 39 0.15
UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila pseudoobscu... 39 0.15
UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema denticol... 39 0.15
UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium th... 39 0.15
UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4; Alphaproteobacteri... 39 0.15
UniRef50_O36966 Cluster: Replicase polyprotein; n=1; Drosophila ... 39 0.20
UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp... 39 0.20
UniRef50_A7SFG1 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.20
UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter carbino... 39 0.20
UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas a... 38 0.26
UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis ala... 38 0.26
UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter xyla... 38 0.26
UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera ara... 38 0.26
UniRef50_A1WT17 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 38 0.26
UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 38 0.26
UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. ... 38 0.26
UniRef50_Q9YWP6 Cluster: Vp8; n=1; Kadipiro virus|Rep: Vp8 - Kad... 38 0.34
UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 38 0.34
UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16; Staphylococcus|Re... 38 0.34
UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio bacte... 38 0.34
UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whol... 38 0.45
UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus acidi... 38 0.45
UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole geno... 38 0.45
UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus Pelagib... 38 0.45
UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep: Ribo... 38 0.45
UniRef50_UPI00015B62EF Cluster: PREDICTED: similar to conserved ... 37 0.60
UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha pro... 37 0.60
UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome s... 37 0.60
UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas w... 37 0.60
UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus h... 37 0.60
UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep: ... 37 0.60
UniRef50_UPI0000E4A4CD Cluster: PREDICTED: similar to Staufen, R... 37 0.79
UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1; Candi... 37 0.79
UniRef50_Q2TL61 Cluster: Eukaryotic translation initiation facto... 37 0.79
UniRef50_Q9NII1 Cluster: Double-stranded RNA-specific editase Ad... 37 0.79
UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio "In... 36 1.1
UniRef50_A3VSG4 Cluster: Ribonuclease III; n=1; Parvularcula ber... 36 1.1
UniRef50_Q7PPS2 Cluster: ENSANGP00000020540; n=1; Anopheles gamb... 36 1.1
UniRef50_Q17BU1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q7UGZ7 Cluster: Ribonuclease 3; n=3; Planctomycetaceae|... 36 1.1
UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep: Rib... 36 1.1
UniRef50_UPI0001554C21 Cluster: PREDICTED: similar to 65 kD prot... 36 1.4
UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium phyt... 36 1.4
UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:... 36 1.4
UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris... 36 1.8
UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum... 36 1.8
UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovley... 36 1.8
UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep: ... 36 1.8
UniRef50_Q0P4K2 Cluster: Putative uncharacterized protein MGC147... 35 2.4
UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter rub... 35 2.4
UniRef50_Q4T7L5 Cluster: Chromosome 14 SCAF8084, whole genome sh... 35 3.2
UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep: Ri... 35 3.2
UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON DNA-bi... 34 4.2
UniRef50_Q4Q981 Cluster: Putative uncharacterized protein; n=2; ... 34 4.2
UniRef50_Q4SXU5 Cluster: Chromosome undetermined SCAF12326, whol... 34 5.6
UniRef50_Q6R257 Cluster: DsRNA-binding protein; n=1; Solanum lyc... 34 5.6
UniRef50_Q57WE5 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_O74424 Cluster: Nucleoporin nup211; n=1; Schizosaccharo... 34 5.6
UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III), double-st... 33 7.4
UniRef50_A5BPJ2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4; D... 33 7.4
UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14; Gammaproteobacter... 33 7.4
UniRef50_UPI00015B62CC Cluster: PREDICTED: similar to CG31045-PA... 33 9.8
UniRef50_UPI0000E4A971 Cluster: PREDICTED: similar to dsRNA aden... 33 9.8
UniRef50_Q30ZL8 Cluster: Pyruvate carboxylase, putative; n=3; De... 33 9.8
UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:... 33 9.8
UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter propi... 33 9.8
UniRef50_Q6IJI9 Cluster: HDC14842; n=1; Drosophila melanogaster|... 33 9.8
UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep: Ri... 33 9.8
>UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious
CG6866-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PB, isoform B -
Apis mellifera
Length = 308
Score = 99.1 bits (236), Expect = 1e-19
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTP+++LQEMM+K P YE + G H F ++ K S RSK++AK EAA
Sbjct: 3 KTPVSILQEMMVKNKITPNYELIHDGGGSHMNVFAYQVKCDDLIASGIGRSKKDAKHEAA 62
Query: 62 RAMLLCLST-IGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 120
+AML ++T G+ P + + E S P + + V L++LC E
Sbjct: 63 KAMLETIATKRGYLQLPASPAQSPIRTPLLPIIPEISR-IPPDIPFVNAVGALQDLCVEN 121
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHERAME 180
L +Y ++D GP H ++F++ + TK+QA+Q+AA + + A
Sbjct: 122 NLQDPKYQQISDVGPPHAKIFTIECEVATLKEIGVAKTKKQAKQEAAKKMLDKLTDLAQY 181
Query: 181 RLVETTPAPWKPDLGQRVSEYH 202
+ P K +LG ++SEYH
Sbjct: 182 TKLSKLPTAKKINLGIKLSEYH 203
>UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 395
Score = 84.6 bits (200), Expect = 3e-15
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRC----KALGESVSASARSKREA 56
MKTP+++LQE++ + G P YE V G H+ TF FR K + + RSK+EA
Sbjct: 113 MKTPVSILQEILSRRGITPGYELVQIEGAIHEPTFRFRVSFKEKDTPFTAMGAGRSKKEA 172
Query: 57 KQEAARAML--LCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDS--RSYVAL 112
K AARA++ L + + AT P+ + S G+C+ D + + L
Sbjct: 173 KHAAARALIDKLMGAQLPEAASSATATSAADPTAAG-SGGDCNTAVGDPDDKIVGNPIGL 231
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLY 171
L+ELC + + P YA + G H RLF++ +I + G +K+ A++ AA ++
Sbjct: 232 LQELCMQRRWPPPTYATETEMGLPHERLFTIACTILQYREIGKGKSKKIAKRSAAHKMW 290
>UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:
CG6866-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 465
Score = 79.0 bits (186), Expect = 2e-13
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRC----KALGESVSASARSKREA 56
MKTP+++LQE++ + G P YE V G H+ TF FR K + + RSK+EA
Sbjct: 133 MKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEA 192
Query: 57 KQEAARAMLLCLSTIGHRVPP-------PFATEFT-QPSHSNQSAGECSEGKAPTVDSRS 108
K AARA++ L IG ++P P T T S + +A G A +
Sbjct: 193 KHAAARALIDKL--IGAQLPESPSSSAGPSVTGLTVAGSGGDGNANATGGGDASDKTVGN 250
Query: 109 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAA 168
+ L+E+C + + P Y + G H RLF++ SI + G +K+ A++ AA
Sbjct: 251 PIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAH 310
Query: 169 DLYLNKHERAMERLVETTPAPWKPDLGQRVSEYHYG 204
+++ E ++ + + + R SE +YG
Sbjct: 311 RMWMRLQETPIDSGKISDSICGELEGEPRSSENYYG 346
>UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE14437p - Nasonia vitripennis
Length = 394
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFR---CKALGESVSA--SARSKREA 56
KTP++VLQE++ + G P+YE V G H+ TF +R + VSA + RSK+EA
Sbjct: 76 KTPVSVLQELLSRRGTTPKYELVQIEGAIHEPTFRYRVTVADVVDPIVSAMGTGRSKKEA 135
Query: 57 KQEAARAM---LLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALL 113
K AA+A+ L+ ++T P P + P N + G+ V++ + L
Sbjct: 136 KHAAAKAVLDKLIGVNTENAEAPIPNSI----PDSQNIQEIQSGYGEEKVVNNP--IGSL 189
Query: 114 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLY 171
+E+C P +Y++ + G H R F++ SI + + G +K+ A+++AA ++
Sbjct: 190 QEMCMSRHWPPPKYSMEGEEGLPHERQFTIVCSILKYRQVGQGKSKKLAKRQAAHKMW 247
>UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious
CG6866-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PA, isoform A -
Apis mellifera
Length = 338
Score = 72.1 bits (169), Expect = 2e-11
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFR---CKALGESVSA--SARSKREA 56
KTP+++LQE++ + G P+YE + G H+ F +R + VSA + +SK+EA
Sbjct: 69 KTPVSILQELLSRRGTTPKYELIQVEGAIHEPIFRYRVTVADVVDPIVSAMGTGKSKKEA 128
Query: 57 KQEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKEL 116
K AARA+L L + P S + Q E K T + + L+E+
Sbjct: 129 KHAAARAVLDKLCRLNSESPDSPLPNSIPDSENLQELSGYGEEKIIT----NPIGALQEM 184
Query: 117 CEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHE 176
C P +Y + + G H R F++ S+ + G +K+ A++ AA ++ H
Sbjct: 185 CMSRHWPPPKYTIENEEGLPHERQFTIVCSVLKYREVGQGKSKKVAKRHAAHKMWQALHY 244
Query: 177 RAME 180
E
Sbjct: 245 MTTE 248
>UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3;
Clupeocephala|Rep: TAR (HIV) RNA binding protein 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 346
Score = 68.9 bits (161), Expect = 2e-10
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTPI++LQE ++G+ P Y+ + G HQ F FR + + SK+ AK +AA
Sbjct: 29 KTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVSVGDINCTGHGPSKKAAKHKAA 88
Query: 62 RAMLLCLSTIGHRVPPPFATEFTQPSHSN-QSAGECSEGKAPTVDSRSY-----VALLKE 115
A L L G + + GEC + + + S V L+E
Sbjct: 89 EAALKMLK--GGMLGGIGGNGMEGDGFVGIEMEGECPQSEMKSSSSTQQAECNPVGALQE 146
Query: 116 LCEE--YKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLN 173
L + ++LP EY + ++GPAH + F++ + SGT+K+ A++ AAA +
Sbjct: 147 LVVQKGWRLP--EYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLSR 204
Query: 174 KHE 176
H+
Sbjct: 205 IHD 207
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 4 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
P+ LQE++++ G ++PEY +SGP H+ F C+ S SK+ AK+ AA
Sbjct: 140 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAA 199
Query: 63 AMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKA 101
ML + + + E + + Q G GK+
Sbjct: 200 KMLSRIHDVPVDMRSSHEAEAEDDTFNMQIGGRLEGGKS 238
>UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6866-PB, isoform B - Tribolium castaneum
Length = 384
Score = 67.7 bits (158), Expect = 4e-10
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEA 60
KTP++VLQE++ + G P+YE V G H+ F +R + V + + RSK++AK A
Sbjct: 64 KTPVSVLQELLSRRGATPKYELVQIEGAIHEPIFRYRVFINNDLVATGTGRSKKDAKHAA 123
Query: 61 ARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR---SYVALLKELC 117
A+ +L L +G + P E S+ A + + D + + + L+E+C
Sbjct: 124 AKNLLDVL--VGKQSP-----EQANASNGTPGANDITAQVVSPFDDKVMGNPIGWLQEMC 176
Query: 118 EEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHER 177
+ P Y + + G H R F++ + +G +K+ A++ AA ++ +
Sbjct: 177 MSRRWPPPSYEMEHEEGLPHERQFTIACQVLKFKEVGTGKSKKLAKRMAAHKMWQALQDM 236
Query: 178 AME 180
+E
Sbjct: 237 PLE 239
>UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19;
Euteleostomi|Rep: TAR RNA-binding protein 2 - Homo
sapiens (Human)
Length = 366
Score = 63.3 bits (147), Expect = 8e-09
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTPI++LQE ++G+ P Y+ + G HQ F FR S + SK+ AK +AA
Sbjct: 29 KTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAA 88
Query: 62 RAMLLCL----------------STIGHRVP---PPF-----ATEFTQPSHSNQSAGECS 97
L L S + +P P F AT + A E
Sbjct: 89 EVALKHLKGGSMLEPALEDSSSFSPLDSSLPEDIPVFTAAAAATPVPSVVLTRSPAMELQ 148
Query: 98 EGKAPTVDSRSYVALLKELCEE--YKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDAS 155
+P + V L+EL + ++LP EY + ++GPAH + F++ + S
Sbjct: 149 PPVSPQQSECNPVGALQELVVQKGWRLP--EYTVTQESGPAHRKEFTMTCRVERFIEIGS 206
Query: 156 GTTKRQARQKAAADLYLNKH 175
GT+K+ A++ AAA + L H
Sbjct: 207 GTSKKLAKRNAAAKMLLRVH 226
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 4 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
P+ LQE++++ G ++PEY +SGP H+ F C+ S SK+ AK+ AA
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAA 219
Query: 63 AMLLCLSTI 71
MLL + T+
Sbjct: 220 KMLLRVHTV 228
>UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC53736 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 62.9 bits (146), Expect = 1e-08
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 29/201 (14%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTP+++LQE+ K G P Y+ + Q G HQ F RC A + SK+ AKQ AA
Sbjct: 5 KTPVSILQELCAKKGVTPVYDTIGQEGASHQPKFTIRCTAGDVVGNGQGPSKKVAKQSAA 64
Query: 62 RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYK 121
+L L VP + S + GE E C ++
Sbjct: 65 EDVLQQLDI---EVPAVETEQDEGRSLKDNPVGELQE---------------LVTCMGWR 106
Query: 122 LPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHERAMER 181
P EY + ++GP H R F + S+ + +KR A++ AA+ AM
Sbjct: 107 KP--EYEALEESGPPHNRRFVISVSVDKYKEQGVDQSKRLAKRAAAS---------AMLE 155
Query: 182 LVETTPAPWKPDLGQRVSEYH 202
++ PA P L R + H
Sbjct: 156 VLRKLPADINPGLINRKQKKH 176
>UniRef50_UPI0001560C6B Cluster: PREDICTED: similar to adenosine
deaminase, RNA-specific; n=1; Equus caballus|Rep:
PREDICTED: similar to adenosine deaminase, RNA-specific
- Equus caballus
Length = 1145
Score = 61.7 bits (143), Expect = 2e-08
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 59
+K PI+ L E Q E+ + QSGP H+ F+F+ G E A A SK+ AKQ+
Sbjct: 446 LKNPISGLLEYAQFASQTCEFNLIEQSGPPHEPRFKFQVVISGREFPPAEAGSKKVAKQD 505
Query: 60 AA-RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDS----RSYVALLK 114
AA +AM + L + + + S+ P+ S ++ V L
Sbjct: 506 AAMKAMTILLEEAKAKDSGRSEESYYYSTERESEKTAESQPTTPSATSFFSGKNPVTTLL 565
Query: 115 ELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAAADLYLN 173
E C E+ L++ GPAH F ++G H+ AS +K+ A+Q AA +
Sbjct: 566 E-CVHKLGSSCEFRLLSREGPAHDPKFQYCVAMGTHTFPTASAPSKKVAKQMAAEEAMKA 624
Query: 174 KHERA 178
HE A
Sbjct: 625 LHEEA 629
Score = 55.2 bits (127), Expect = 2e-06
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 59
K P+T L E + KLG E+ +++ GP H F++ C A+G +ASA SK+ AKQ
Sbjct: 558 KNPVTTLLECVHKLGSSCEFRLLSREGPAHDPKFQY-CVAMGTHTFPTASAPSKKVAKQM 616
Query: 60 AARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR--SYVALLKE-- 115
AA + L H QP +N + + E P R V L
Sbjct: 617 AAEEAMKAL----HEEAANSTPSDNQPGSTNTESLDNLESVIPNKVRRIGELVRYLNTNP 672
Query: 116 ---LCEEYKLPG--VEYALVADTGPAHMRLFSVRASIGLHSRDA-SGTTKRQARQKAA 167
L E + G E+ LV +GP H F +A +G A +K+Q +Q+AA
Sbjct: 673 VGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAA 730
Score = 41.9 bits (94), Expect = 0.021
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 62
P+ L E G E++ V QSGP H+ F ++ K G A A SK++ KQEAA
Sbjct: 672 PVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAAD 731
Query: 63 AMLLCL 68
A L L
Sbjct: 732 AALRVL 737
>UniRef50_O75569 Cluster: Interferon-inducible double stranded
RNA-dependent protein kinase activator A; n=23;
Euteleostomi|Rep: Interferon-inducible double stranded
RNA-dependent protein kinase activator A - Homo sapiens
(Human)
Length = 313
Score = 59.7 bits (138), Expect = 1e-07
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 19/169 (11%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTPI VL E MK IP YEC H TF FR + + SK+ AK AA
Sbjct: 33 KTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEGTSKKLAKHRAA 92
Query: 62 RAMLLCL---STIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCE 118
A + L ++I VP P P S Q + + + L+EL
Sbjct: 93 EAAINILKANASICFAVPDPL-----MPDPSKQPKNQLNP-----------IGSLQELAI 136
Query: 119 EYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
+ EY L + GPAH R ++ + G +K+QA++ AA
Sbjct: 137 HHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAA 185
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 4 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
PI LQE+ + G ++PEY + GP H+ + C+ + SK++AK+ AA
Sbjct: 127 PIGSLQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAAE 186
Query: 63 AMLLCLSTI 71
L S I
Sbjct: 187 KFLAKFSNI 195
>UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=32; Theria|Rep: Double-stranded
RNA-specific adenosine deaminase - Homo sapiens (Human)
Length = 1226
Score = 59.7 bits (138), Expect = 1e-07
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 59
+K PI+ L E Q E+ + QSGP H+ F+F+ G E A A SK+ AKQ+
Sbjct: 501 LKNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQD 560
Query: 60 AA-RAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSY------VAL 112
AA +AM + L + +E + + + + + +E + PT + S+ V
Sbjct: 561 AAMKAMTILLEEA--KAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVTT 618
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAAADLY 171
L E C E+ L++ GPAH F ++G + S +K+ A+Q AA +
Sbjct: 619 LLE-CMHKLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQMAAEEAM 677
Query: 172 LNKHERA 178
H A
Sbjct: 678 KALHGEA 684
Score = 41.9 bits (94), Expect = 0.021
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 62
P+ L E G E++ V QSGP H+ F ++ K G A A SK++ KQEAA
Sbjct: 727 PVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAAD 786
Query: 63 AMLLCL 68
A L L
Sbjct: 787 AALRVL 792
>UniRef50_O95793 Cluster: Double-stranded RNA-binding protein
Staufen homolog 1; n=72; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 1 -
Homo sapiens (Human)
Length = 577
Score = 58.4 bits (135), Expect = 2e-07
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 60
K+ I+ + E+ +K +E +SGP H F + ++GE V +SK+ +K+ A
Sbjct: 183 KSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTKV-SVGEFVGEGEGKSKKISKKNA 241
Query: 61 ARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-SYVALLKELCEE 119
A A+L L ++PP A E +P ++ +P + ++ L ++ +
Sbjct: 242 AIAVLEELK----KLPPLPAVERVKPRIKKKTKPIVKPQTSPEYGQGINPISRLAQIQQA 297
Query: 120 YKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLY-------- 171
K EY L+ + G R F ++ +G H+ + +GT K+ A++ AA ++
Sbjct: 298 KKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVP 357
Query: 172 LNKHERAMERLVETTPAPWKPDLGQRVSEYHYGLISHTGECTARSRRRLPVVLDQCLRRA 231
+ + + E TP KP G++V+ + G G R+P + Q L
Sbjct: 358 QAQPTKPALKSEEKTPIK-KPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAG 416
Query: 232 MVDTDPEKRMA 242
++ PE A
Sbjct: 417 ILPMVPEVAQA 427
>UniRef50_Q9I8Y6 Cluster: Double-stranded RNA adenosine deaminase
DRADA; n=2; Takifugu rubripes|Rep: Double-stranded RNA
adenosine deaminase DRADA - Fugu rubripes (Japanese
pufferfish) (Takifugu rubripes)
Length = 1194
Score = 57.6 bits (133), Expect = 4e-07
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQE 59
+K P++ L E LGQ E+ + QSGP H F + G A A SK+ AK++
Sbjct: 469 LKNPVSGLMEYAQFLGQNCEFLLLDQSGPSHDPRFRMQVMLNGRQFPVAEASSKKVAKKD 528
Query: 60 AARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKA-PTVDSRSY------VAL 112
AA A L L + +++ + NQ G+ ++ + P + SRS V++
Sbjct: 529 AAAATLHVLI---EEMEGGTSSKDKNNAAINQVTGQLTDTEGPPQLLSRSLPGGKNPVSV 585
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLH-SRDASGTTKRQARQKAAAD 169
L E + P +E+ + GP H F R +G + +AS +K+ ARQ AA +
Sbjct: 586 LMEYGQHSGNP-IEFIMTGQAGPPHDTRFMYRVKVGENLFSEASAPSKKAARQLAAEE 642
Score = 37.5 bits (83), Expect = 0.45
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 5 ITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARA 63
++ L E G E V QSGP H+ F ++ K G A A +K++ KQEAA A
Sbjct: 708 VSGLLEYAKARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPAVCASNKKQGKQEAADA 767
Query: 64 MLLCL 68
L L
Sbjct: 768 ALRVL 772
>UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aedes
aegypti|Rep: RNA binding protein, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 289
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTPITVLQE++ + G P+Y+ + H TF +R + + +SK+EAKQ AA
Sbjct: 139 KTPITVLQEVLTRRGIYPQYDFIQPDAAVHDGTFRYRVSYQDKEAMGTGKSKKEAKQAAA 198
Query: 62 RAML 65
++++
Sbjct: 199 KSLI 202
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K P+++L E++ + G P+Y+ + + G H+ TF +R + +SK+EAK AA
Sbjct: 60 KMPVSLLYELLSRRGITPQYDLLPREGAAHEQTFSYRVSYPDGDAIGTGQSKKEAKHAAA 119
Query: 62 RAML 65
+A++
Sbjct: 120 KALI 123
>UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 423
Score = 54.0 bits (124), Expect = 5e-06
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K+ I+ + E+ ++ + +++ + +GP H F+ + K++AK+EAA
Sbjct: 237 KSEISQVYEIATRMKMMVDFQDMENAGPAHMKKFKIKATVGPYMTEGEGNRKKDAKKEAA 296
Query: 62 RAMLLCLSTIGH-RVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 120
ML L + V P ++ + N + PT++S +++L ++ +
Sbjct: 297 VRMLAELKKLPEPPVDPEKKKKYQRHGLYNAKKVKPKSDIDPTLNS---ISILGQILQRR 353
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
P Y+LV + G + F++R +G H G K+ A++ AA
Sbjct: 354 HDPAPVYSLVEERGHMMKKEFTLRVKVGSHEALGVGPNKKTAKKNAA 400
Score = 42.7 bits (96), Expect = 0.012
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 51 RSKREAKQEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYV 110
R K++A+ +AA+ + L E + ++ S G G +S +
Sbjct: 182 RDKQKARHDAAQKAMKVLREELLTQMSQCGIEVSGDTNETVSNG-VDAGDEEDESDKSEI 240
Query: 111 ALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
+ + E+ K+ V++ + + GPAHM+ F ++A++G + + G K+ A+++AA
Sbjct: 241 SQVYEIATRMKMM-VDFQDMENAGPAHMKKFKIKATVGPYMTEGEGNRKKDAKKEAA 296
Score = 36.7 bits (81), Expect = 0.79
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGE 44
KTPI+++ E+ PEY + ++GP H+ TF+ + K LG+
Sbjct: 4 KTPISLMNELAKANNLNPEYNVIEETGPAHKKTFKVQLK-LGD 45
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 104 VDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG-LHSRDASGTTKRQA 162
+ ++ ++L+ EL + L EY ++ +TGPAH + F V+ +G + + + A
Sbjct: 1 MSQKTPISLMNELAKANNL-NPEYNVIEETGPAHKKTFKVQLKLGDIGIWEGMANNIKLA 59
Query: 163 RQKAA 167
+ KAA
Sbjct: 60 KHKAA 64
>UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia
californica|Rep: Neuron-specific staufen - Aplysia
californica (California sea hare)
Length = 950
Score = 53.6 bits (123), Expect = 6e-06
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
+K+ I+++ E+ ++ + ++E + ++GP H F RC SK+ +K++A
Sbjct: 576 LKSEISLVHEIALRRNMVVQFEVIRETGPPHMKNFLTRCTVADMVTEGEGNSKKTSKKKA 635
Query: 61 ARAMLLCLSTIGHRVPPPF-----ATEFTQPSHSNQSAGECSEGKA-PTVD-SRSYVALL 113
A ML L + P F + + + N E + KA P + ++ L
Sbjct: 636 AELMLEELRKLPPLATPAFPRPKSKIQMNKKKNRNLIKSELQQQKADPNYGVGINPISRL 695
Query: 114 KELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
++ + K Y LV + G R F V+ + + SG K+ A++ AA
Sbjct: 696 IQIMQAQKKKEPVYTLVTERGLPRRREFIVQVEVEDKTCPGSGPNKKLAKRAAA 749
Score = 42.3 bits (95), Expect = 0.016
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTP+ ++ E+ +Y V + GP H+ TF + K E SAS S ++A Q AA
Sbjct: 343 KTPMCLINELARFNKMSHQYTLVDEQGPAHKKTFYVKLKLGDEEYSASGESIKKA-QHAA 401
Query: 62 RAMLLCLSTIGHRVPPP 78
A+ L + H P P
Sbjct: 402 AAIALVETKCPHPPPKP 418
Score = 41.9 bits (94), Expect = 0.021
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 74 RVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSY--VALLKELCEEYKLPGVEYALVA 131
+ P + S + +SA SE + +++ + L+ EL K+ +Y LV
Sbjct: 308 QAPKTSGRDSVHVSDNEESASNASEMQQSLANTKEKTPMCLINELARFNKMSH-QYTLVD 366
Query: 132 DTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAA 168
+ GPAH + F V+ +G ASG + ++A+ AAA
Sbjct: 367 EQGPAHKKTFYVKLKLGDEEYSASGESIKKAQHAAAA 403
>UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to staufen -
Nasonia vitripennis
Length = 587
Score = 53.2 bits (122), Expect = 9e-06
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQE 59
+K+P++++ E +K G ++ V+++G H TF RC +G+ V+ SK+ +K+
Sbjct: 188 LKSPVSLVHETALKRGLSVSFDVVSETGKPHIRTFMTRC-TVGDKVTLGEGSSKKVSKKR 246
Query: 60 AARAMLLCLSTIGHRVPP----PFATEFTQPSHSNQSAGECSEGKAPTVDSRSY-----V 110
AA ML L + P + P+ +S + P ++ S +
Sbjct: 247 AAELMLEELKRLPLVAAPIQNRTLRLKRKPPATKKKSRNLIKVYQEPRTEADSSEEVNPI 306
Query: 111 ALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADL 170
+ L ++ + + Y LV + G R F + S+G HS +G K+ A++ AA L
Sbjct: 307 SRLVQIQQAKREREPVYNLVEEKGAPRRREFVMEVSVGQHSAQGTGPNKKLAKRAAAEAL 366
>UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=8; Eutheria|Rep: Double-stranded
RNA-specific adenosine deaminase - Mus musculus (Mouse)
Length = 1178
Score = 53.2 bits (122), Expect = 9e-06
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 8/185 (4%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 59
+K P++ L E Q ++ + QSGP H+ F+F+ G E A A SK+ AKQ+
Sbjct: 454 LKNPVSGLLEYAQFTSQTCDFNLIEQSGPSHEPRFKFQVVINGREFPPAEAGSKKVAKQD 513
Query: 60 AA-RAMLLCLSTIGHR---VPPPFA-TEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLK 114
AA +AM + L + P + + S A S +S V L
Sbjct: 514 AAVKAMAILLREAKAKDSGQPEDLSHCPMEEDSEKPAEAQAPSSSATSLFSGKSPVTTLL 573
Query: 115 ELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAAADLYLN 173
E C E+ L++ GPAH F ++G + S +K+ A+Q AA +
Sbjct: 574 E-CMHKLGNSCEFRLLSKEGPAHDPKFQYCVAVGAQTFPPVSAPSKKVAKQMAAEEAMKA 632
Query: 174 KHERA 178
E A
Sbjct: 633 LQEEA 637
Score = 40.3 bits (90), Expect = 0.065
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 4 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 62
P+ L E G E++ + QSGP H+ F ++ K G A A SK++ KQ+AA
Sbjct: 676 PVGGLLEYARSHGFAAEFKLIDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQDAAD 735
Query: 63 AMLLCL 68
A L L
Sbjct: 736 AALRVL 741
>UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3;
Xenopus|Rep: DsRNA adenosine deaminase - Xenopus laevis
(African clawed frog)
Length = 1270
Score = 52.4 bits (120), Expect = 1e-05
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 12/178 (6%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 60
K PI++L E K G + E++ V+Q GP H F + K ++ A +K+ AK A
Sbjct: 678 KNPISLLMEHGQKSGNMCEFQLVSQEGPPHDPKFTYTVKIGNQTFPPVVANNKKMAKHLA 737
Query: 61 ARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKEL---- 116
A A + L G P F + + E S S S L+K L
Sbjct: 738 AEAAVRELLGEGALQPEKFDPSYNANPTEFPAIPELSAEDLKMAQSSSVGDLIKYLNANP 797
Query: 117 ----CEEYKLPG--VEYALVADTGPAHMRLFSVRASIGLHSRDA-SGTTKRQARQKAA 167
E + G E+ +V TGP H F +A +G A S + K+QA+ +AA
Sbjct: 798 VSGLLEYARAKGFAAEFKMVNQTGPPHDPKFVFQAKVGGRWFPAVSASNKKQAKAEAA 855
Score = 41.9 bits (94), Expect = 0.021
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 4 PITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAAR 62
P++ L E G E++ V Q+GP H F F+ K G A SA +K++AK EAA
Sbjct: 797 PVSGLLEYARAKGFAAEFKMVNQTGPPHDPKFVFQAKVGGRWFPAVSASNKKQAKAEAAD 856
Query: 63 AMLLCL 68
A L L
Sbjct: 857 AALRVL 862
Score = 39.1 bits (87), Expect = 0.15
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 60
K P++ L E Q ++ + QSGP H F+ + G A A SK+ AK++A
Sbjct: 573 KNPVSGLLEFTHYCSQQCDFALLNQSGPSHDPRFKIQAVIDGRRFPVAEANSKKTAKKDA 632
Query: 61 AR-AMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEE 119
A A+ + L E TQ + ++ P +++ ++LL E ++
Sbjct: 633 AALALRILLREEQGGTEDEVMAENTQVPEVKEEQNVPAQPSFPC--NKNPISLLMEHGQK 690
Query: 120 YKLPGVEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAA 167
E+ LV+ GP H F+ IG + K+ A+ AA
Sbjct: 691 -SGNMCEFQLVSQEGPPHDPKFTYTVKIGNQTFPPVVANNKKMAKHLAA 738
>UniRef50_UPI0000D57240 Cluster: PREDICTED: similar to CG12598-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG12598-PA, isoform A - Tribolium castaneum
Length = 603
Score = 51.2 bits (117), Expect = 3e-05
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
+ P++VL ++ + L +Y + Q GP H F+ + G++ SK+ AK +AA
Sbjct: 42 QNPVSVLNQLRVGL----KYNFIEQRGPSHAPLFKVAVEVDGQTYYGVGGSKKLAKCKAA 97
Query: 62 RAMLLCLSTIGHRVPPPFATEFTQPSHSNQS-AGECSEGKAPTVDSRSYVALLKELCEEY 120
L + T ++ + E EG V ++ V LL EL
Sbjct: 98 EEALKSFIQFPNNTAYAVGGNGTNVDFTSDAFEAEKKEGPTKKVATKGPVMLLNEL---- 153
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
P V Y V + G A+ R F + +IG +G++K+QA+ AA
Sbjct: 154 -YPNVVYTCVENDGSAYAR-FKMTVTIGDEKFIGTGSSKKQAKNAAA 198
>UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000019093 - Anopheles gambiae
str. PEST
Length = 702
Score = 50.0 bits (114), Expect = 8e-05
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 80 ATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR 139
A E +P G +G P + +S ++L+ E+ + L V + ++++ GP HM
Sbjct: 244 ALEVLKPLTMEGRDGTSVDGLDPNAELKSPISLVHEIAVQRSL-SVVFEVISEKGPPHMT 302
Query: 140 LFSVRASIGLHSRDASGTTKRQARQKAAADLY--LNKHERAMERLVETTPAPW 190
+F + +G + GT K+ ++++AA + L K ++A ++L P+PW
Sbjct: 303 VFVTQCKVGTIVTEGEGTGKKLSKKRAAEKMLEELRKLQKAEQQL---NPSPW 352
Score = 39.9 bits (89), Expect = 0.085
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKA 166
++ + L+ EL K+ +Y L ++GPAH + F+V +G A G + ++A+ KA
Sbjct: 3 KTTMCLVNELARYNKIQH-QYRLTGESGPAHKKHFTVMLKLGDEEYTAEGASIKKAQHKA 61
Query: 167 AAD-LYLNKHERAMERLVETTPAPWKPDLGQRVSEYHY-GLISHTGECTARSRRRLPV 222
A D + K++ R T K ++ L GE T + + +PV
Sbjct: 62 AGDAIAATKYKHPPARTNRRTKTGTKGNVSSFTPTVELNALAMKRGEPTVYTVKAVPV 119
Score = 37.9 bits (84), Expect = 0.34
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
+K+PI+++ E+ ++ +E +++ GP H F +CK K+ +K+ A
Sbjct: 270 LKSPISLVHEIAVQRSLSVVFEVISEKGPPHMTVFVTQCKVGTIVTEGEGTGKKLSKKRA 329
Query: 61 ARAML 65
A ML
Sbjct: 330 AEKML 334
>UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n=9;
Euteleostomi|Rep: Double-stranded RNA-specific editase -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1382
Score = 48.4 bits (110), Expect = 2e-04
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 26/230 (11%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQE 59
K P++VL E + G ++ Q GP H F FR K +GE + ASA SK+ A+Q
Sbjct: 742 KNPVSVLMEHSQRSGHPIQFIKTGQEGPSHDPRFMFRVK-VGERLFQEASAPSKKAARQL 800
Query: 60 AARAMLLCLSTIG--H-RVPP----PFATEFTQP------------SHSNQSAGECSEGK 100
AA + L G H PP P +QP + Q+A E G
Sbjct: 801 AAEEAVKELMGDGLLHLNKPPSSFCPMGDSESQPMFPACPSLPPLTAAELQAAHEAGVGD 860
Query: 101 APTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDA-SGTTK 159
+ + V+ L EL + + LV +GP+H F+ +A +G A + K
Sbjct: 861 LINHLNNNAVSGLLELRPVLEASLLSIRLVGQSGPSHEPKFTYQAKLGGRWFPAVCASNK 920
Query: 160 RQARQKAAADLYLNKHERAMERLVETTP-APWKPDLGQRVSEYHYGLISH 208
+Q +Q+ AAD L E+ T P P G + + H ++SH
Sbjct: 921 KQGKQE-AADAALRVLIGEAEKAARTGELMPELPVSGSTIHD-HIAMLSH 968
Score = 42.3 bits (95), Expect = 0.016
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 16/181 (8%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEA 60
K P++ L E LG E+ + QSGP H F + G +A +K+ AK++A
Sbjct: 627 KNPVSGLMEFAQHLGYTCEFLLLEQSGPSHDPRFRMQVMLDGRRFPAAEGSNKKVAKKDA 686
Query: 61 ARAMLLCL-----STIGHRVPPPF------ATEFTQPSHSNQSAGECSEGKAPTVDSRSY 109
A L L G P T+ + + P ++
Sbjct: 687 AAITLKILWKELDGGGGEEEEEPHIEGAGSTTDMADDMGGTDTPPQALSRSLP--GGKNP 744
Query: 110 VALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLH-SRDASGTTKRQARQKAAA 168
V++L E + P +++ GP+H F R +G ++AS +K+ ARQ AA
Sbjct: 745 VSVLMEHSQRSGHP-IQFIKTGQEGPSHDPRFMFRVKVGERLFQEASAPSKKAARQLAAE 803
Query: 169 D 169
+
Sbjct: 804 E 804
>UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter
oxydans|Rep: Ribonuclease III - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 174
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 2 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
K P T+LQE M+ G +P YE ++ GP H F +G + + A SKR A+ A
Sbjct: 101 KEPKTLLQEYMLSQGLPLPHYELLSSDGPSHAPVFRVSVTTMGHTGTGEAGSKRLAESAA 160
Query: 61 ARAML 65
A A+L
Sbjct: 161 ATALL 165
>UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2;
Chloroflexus|Rep: Ribonuclease III, bacterial -
Chloroflexus aurantiacus J-10-fl
Length = 244
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 4 PITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
P T LQE+M + Q+P+Y + GP+HQ + G + S SK+EAK+ AAR
Sbjct: 162 PTTRLQELMQARFKQLPDYSIEEERGPEHQREYVMAVTVAGRKFTGSGSSKKEAKRAAAR 221
Query: 63 AML 65
L
Sbjct: 222 KAL 224
>UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease III - Solibacter usitatus
(strain Ellin6076)
Length = 271
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 108 SYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLH-SRDASGTTKRQARQKA 166
++ + L+EL + +LP Y++V + GP H + F+V +G + A G TK+ A Q+A
Sbjct: 172 NFKSALQELAQTRRLPQPRYSVVRERGPEHSKTFTVEVRVGKEWTAQAEGRTKKIAAQRA 231
Query: 167 AADLYLNKHERAMERLVETTPAPWKPDLGQRVSEYHYGLISHT 209
A LY + L + +P D G G+IS T
Sbjct: 232 ARGLYERLMGDPIVPLPDDSPGDSPDDSGDAAES---GVISAT 271
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 TVLQEMMM--KLGQIPEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAAR 62
+ LQE+ +L Q P Y V + GP+H TF + E + A R+K+ A Q AAR
Sbjct: 175 SALQELAQTRRLPQ-PRYSVVRERGPEHSKTFTVEVRVGKEWTAQAEGRTKKIAAQRAAR 233
Query: 63 AM 64
+
Sbjct: 234 GL 235
>UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen -
Aedes aegypti (Yellowfever mosquito)
Length = 1103
Score = 48.0 bits (109), Expect = 3e-04
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 6/176 (3%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
+K+PI+++ EM +K ++E + GP H F CK K+ +K+ A
Sbjct: 615 LKSPISLVHEMALKRKLTVQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKLSKKRA 674
Query: 61 ARAMLLCLSTIGHRVPPPFATEFTQ-----PSHSNQSAGECSE-GKAPTVDSRSYVALLK 114
A ML L + P + P ++ E G + ++ L
Sbjct: 675 AEKMLDELRKLPPASPEKNTRMLLKQKRKVPLPKKKTRNLIKEKGDEDPTGMVNPISRLM 734
Query: 115 ELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADL 170
++ + K Y LV + G A R F + S S G TK+ A+++AA +L
Sbjct: 735 QIQQARKEKEPVYTLVEERGVARRREFIMEVSASGKSATGIGPTKKLAKKEAAENL 790
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 102 PTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQ 161
P D +S ++L+ E+ + KL V++ + + GP HM++F+ +G + G K+
Sbjct: 611 PNSDLKSPISLVHEMALKRKLT-VQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKL 669
Query: 162 ARQKAA 167
++++AA
Sbjct: 670 SKKRAA 675
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 110 VALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
+ L+ EL K+ +Y L ++GPAH + F+V +G A G + ++A+ AA
Sbjct: 345 MCLVNELARYNKIQH-QYRLTCESGPAHKKRFTVTLKLGDEEYTAEGPSIKKAQHSAA 401
>UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanthus
DK 1622|Rep: Ribonuclease III - Myxococcus xanthus
(strain DK 1622)
Length = 260
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASA--RSKREAKQEAAR 62
T+LQEM +L P Y V++SGP+H FE LGE+ A A RSK+EA+Q AA+
Sbjct: 175 TLLQEMAHERLKLQPRYRVVSESGPEHSKVFEVEL-MLGETAFARATGRSKKEAEQSAAQ 233
Query: 63 AML 65
A L
Sbjct: 234 ATL 236
>UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27;
Epsilonproteobacteria|Rep: Ribonuclease 3 - Helicobacter
hepaticus
Length = 240
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 6 TVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAAR 62
T LQE+ G+IP Y +++SGP H+ +FE G E AS SK+EA+Q++A+
Sbjct: 163 TALQEITQAFYGEIPTYTLISESGPDHKKSFEIALSVQGKEYARASGNSKKEAQQKSAQ 221
Score = 39.9 bits (89), Expect = 0.085
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 109 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAA 167
Y L+E+ + + Y L++++GP H + F + S+ G ASG +K++A+QK+A
Sbjct: 161 YKTALQEITQAFYGEIPTYTLISESGPDHKKSFEIALSVQGKEYARASGNSKKEAQQKSA 220
Query: 168 ADLY 171
Y
Sbjct: 221 QIAY 224
>UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Staufen
- Musca domestica (House fly)
Length = 985
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 80 ATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR 139
A E + +NQ E D++S ++++ E+ + LP V++ ++ + GPAHMR
Sbjct: 551 AIEALKEEMNNQQKDNEEEKNDEEGDNKSPISMVFEIGIKRNLP-VDFKILREDGPAHMR 609
Query: 140 LFSVRASIGLHSRDASGTTKRQARQKAA 167
F+ +G +A GT K+ +++KAA
Sbjct: 610 TFTTACIVGQIVTEAEGTGKKISKKKAA 637
Score = 38.7 bits (86), Expect = 0.20
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 60
K+PI+++ E+ +K +++ + + GP H TF C +G+ V+ A K+ +K++A
Sbjct: 578 KSPISMVFEIGIKRNLPVDFKILREDGPAHMRTFTTAC-IVGQIVTEAEGTGKKISKKKA 636
Query: 61 ARAMLLCLSTIGHRVPP--PFATEFTQPSHSNQSAGECSEGK 100
A+ ML L ++PP P P+ + G S GK
Sbjct: 637 AQKMLEELK----KLPPIEPTTANANSPNKRAKGGGGGSGGK 674
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 89 SNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG 148
+N +AG + ++ + L+ +L K+ +Y L + GPAH + F+V +G
Sbjct: 270 NNNAAGGKESNDFKSSREKTPMCLVNDLARFNKI-SFQYRLTGENGPAHCKRFTVTLKLG 328
Query: 149 LHSRDASGTTKRQARQKAAADLYL 172
A G ++A+ AA + L
Sbjct: 329 DEEYMAEGFKIKEAQHMAAKEAIL 352
>UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein
Staufen homolog 2; n=59; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 2 -
Homo sapiens (Human)
Length = 570
Score = 46.4 bits (105), Expect = 0.001
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 9/183 (4%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K+ I+++ E+ +K +E + +SGP H +F R S SK+ +K+ AA
Sbjct: 206 KSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAA 265
Query: 62 RAMLLCLSTIGHR--VPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEE 119
+L L + V P +P ++ E +G P ++ L ++ +
Sbjct: 266 TTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNP-------ISRLAQIQQA 318
Query: 120 YKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHERAM 179
K +Y L+++ G R F ++ +G +G K+ A++ AA + L +A
Sbjct: 319 KKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKAS 378
Query: 180 ERL 182
L
Sbjct: 379 TNL 381
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 86 PSHSNQSAGECSEGKAPTVDS-RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVR 144
P S Q+ GE + D+ +S ++L+ E+ + +P V + ++ ++GP HM+ F R
Sbjct: 185 PERSPQN-GESGKDMDDDKDANKSEISLVFEIALKRNMP-VSFEVIKESGPPHMKSFVTR 242
Query: 145 ASIGLHSRDASGTTKRQARQKAA 167
S+G S + G +K+ ++++AA
Sbjct: 243 VSVGEFSAEGEGNSKKLSKKRAA 265
Score = 38.3 bits (85), Expect = 0.26
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 126 EYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
+Y L+ + GPAH ++FSV+ S+G + ++ G++ ++A+Q A
Sbjct: 25 QYKLLNERGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVA 66
>UniRef50_Q56UE8 Cluster: Putative double strand RNA binding
protein; n=1; Lymnaea stagnalis|Rep: Putative double
strand RNA binding protein - Lymnaea stagnalis (Great
pond snail)
Length = 141
Score = 46.0 bits (104), Expect = 0.001
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQE 59
KTPI+ LQE K P+Y+ +A G H+ TF R +G++ A+ + SK++AK
Sbjct: 7 KTPISYLQEYATKHAITPQYDLIANEGAVHEPTFIMRV-TVGDNAVATGKGSSKKKAKHA 65
Query: 60 AARAMLLCL--STIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELC 117
AA+ L L T G T T P+ + + D + + L+E
Sbjct: 66 AAQNALNILLGVTNGQEEIKEEPTVSTAPTPNKEE------------DVGNPIGELQEFT 113
Query: 118 EEYKLPGVEYALVADTGPAHMRLF 141
++ L Y V + GP H R F
Sbjct: 114 QKKLLKPPIYEFVTEQGPPHAREF 137
>UniRef50_A7S1J6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 118
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTPI+ L E+ +++G ++E V+ G H TF CKA + + SK++AKQ AA
Sbjct: 33 KTPISELLELAVQMGIKVDFEQVSAVGMPHNQTFTINCKAGDFTGIGTGPSKKKAKQNAA 92
Query: 62 RAML 65
A L
Sbjct: 93 SATL 96
>UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28;
Alphaproteobacteria|Rep: Ribonuclease 3 - Silicibacter
pomeroyi
Length = 225
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCK-ALGESVSASARSKREAKQEAARA 63
T LQE GQ P YE V +SGP H F + A G A+A +KR+A+Q AAR
Sbjct: 160 TALQEWAQARGQTPPRYELVKRSGPDHAPVFTILAELADGRRAEATAGAKRQAEQAAARK 219
Query: 64 ML 65
+L
Sbjct: 220 LL 221
Score = 33.5 bits (73), Expect = 7.4
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 105 DSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSR-DASGTTKRQAR 163
D+R L+E + Y LV +GP H +F++ A + R +A+ KRQA
Sbjct: 154 DARDAKTALQEWAQARGQTPPRYELVKRSGPDHAPVFTILAELADGRRAEATAGAKRQAE 213
Query: 164 QKAAADL 170
Q AA L
Sbjct: 214 QAAARKL 220
>UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Ribonuclease III - Hyphomonas
neptunium (strain ATCC 15444)
Length = 234
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 2 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
K P T+LQE G +P+Y +SGP H +E + +A+ SKREA++ A
Sbjct: 163 KDPKTLLQEWAQGQGHPLPDYVVTGRSGPDHAPQYEVEVRLAVGKATATGPSKREAERHA 222
Query: 61 ARAMLLCLS 69
A ML L+
Sbjct: 223 AALMLRTLT 231
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 112 LLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAA 168
LL+E + P +Y + +GP H + V + + A+G +KR+A + AAA
Sbjct: 168 LLQEWAQGQGHPLPDYVVTGRSGPDHAPQYEVEVRLAVGKATATGPSKREAERHAAA 224
>UniRef50_A7S1J7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 69
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 LQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAML 65
LQE+ +K G Q PEY+ V GP H FE + + RSK++AK+ AA AML
Sbjct: 11 LQEVTVKKGWQYPEYKDVKAKGPPHMRQFEMVVTVGTLTATGKGRSKKDAKRSAANAML 69
Score = 33.1 bits (72), Expect = 9.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 126 EYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
EY V GP HMR F + ++G + G +K+ A++ AA
Sbjct: 24 EYKDVKAKGPPHMRQFEMVVTVGTLTATGKGRSKKDAKRSAA 65
>UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep:
Ribonuclease III - Thermosinus carboxydivorans Nor1
Length = 243
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARA 63
TVLQE++ + G+ YE VA+ GP H TFE + + A S ++K+EA+Q AA+
Sbjct: 172 TVLQEVVQQAGECKISYEVVAEYGPDHNKTFEVSVLVNHQHLGAGSGKNKKEAEQNAAKE 231
Query: 64 ML 65
L
Sbjct: 232 AL 233
>UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease III - Ruthia magnifica
subsp. Calyptogena magnifica
Length = 221
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MKTPITVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAK 57
+K P T LQE + K G + P+YE G H A F C K VS SA+S ++A+
Sbjct: 148 LKDPKTQLQEYLQKYGNVLPKYELTDTIGKDHNAIFTINCLLKDQNLQVSQSAKSIKKAE 207
Query: 58 QEAARAML 65
Q A+ +L
Sbjct: 208 QSCAQTLL 215
>UniRef50_A7T6A8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 171
Score = 44.8 bits (101), Expect = 0.003
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 97 SEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASG 156
S K T + ++ L +L EYK PG+E+ LV+ GP H F V ++ + + G
Sbjct: 44 SAKKRKTSSNATFKTPLMQL-NEYK-PGLEFRLVSQEGPPHDTTFVVAVTVNGQTYEGKG 101
Query: 157 TTKRQARQKAAADLYLNKHERAMERLVETTPAPWKPDLGQRVSEYHYGLISHTGECTARS 216
++K++A+ AA + + ++T AP D + G++S + TAR
Sbjct: 102 SSKQRAKHDAAEKALQSCVQLPFN--IKTEYAPTNEDFTADAT----GILSRRIQRTARK 155
Query: 217 RRRLPVVLDQCLRRAM 232
R+ LP Q L+ +
Sbjct: 156 RQILPNSARQTLQSTL 171
Score = 37.9 bits (84), Expect = 0.34
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
KTP+ L E L E+ V+Q GP H TF G++ SK+ AK +AA
Sbjct: 57 KTPLMQLNEYKPGL----EFRLVSQEGPPHDTTFVVAVTVNGQTYEGKGSSKQRAKHDAA 112
Query: 62 -RAMLLCL 68
+A+ C+
Sbjct: 113 EKALQSCV 120
>UniRef50_A0NFW6 Cluster: ENSANGP00000031506; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031506 - Anopheles gambiae
str. PEST
Length = 175
Score = 44.4 bits (100), Expect = 0.004
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 2 KTPITVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
K PIT+LQEM K+ +P Y+ + + H K + RSK+EAK E+
Sbjct: 10 KMPITMLQEMCFKVKSTLPIYQFLGEECSPHSVNV----KLFSYMATGVGRSKQEAKHES 65
Query: 61 ARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 120
A ++ + P E + + + G + + T V ++++C +
Sbjct: 66 AWQLIRLALEL------PAGEEDEMVATAAEERGSLAALEIGT----DRVNQVRDICIQR 115
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADL 170
P E V GP+H +F I R S +TK+ A+Q A ++
Sbjct: 116 NFPLPEIVQVRSYGPSHAPVFEFECRIREIVRRGSHSTKKGAKQIACQEM 165
Score = 37.1 bits (82), Expect = 0.60
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 18 IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCLSTIG 72
+PE V GP H FEF C+ S +K+ AKQ A + M+ L ++G
Sbjct: 119 LPEIVQVRSYGPSHAPVFEFECRIREIVRRGSHSTKKGAKQIACQEMIKTLQSVG 173
>UniRef50_Q4V9C6 Cluster: Zgc:113842; n=6; Clupeocephala|Rep:
Zgc:113842 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 820
Score = 44.0 bits (99), Expect = 0.005
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 12 MMKLGQIPE---YECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 68
+MKL Q+ Y+ +Q+GP+H+ F + G + A+ SKR AK A+ +L+ L
Sbjct: 463 LMKLNQLRPGTVYKLASQTGPEHEPQFSMTVEVDGVTYEATGPSKRSAKLHVAQKVLVAL 522
Query: 69 ST-IGHRVPP-------PFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 120
+ P +T S N G + + ++ + EL E
Sbjct: 523 GVPLPSETKPAEEKKSQSVSTPAATASSENTPTGSDDGAEGGPILTKHGKNPVMELNE-- 580
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
K ++Y LV+ G + + F++ + SG+ K+ A+ AA
Sbjct: 581 KRRSLKYELVSVKGRFNDKTFTIEVDVDGQKFQGSGSNKKLAKANAA 627
>UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter
nodosus VCS1703A|Rep: Ribonuclease III - Dichelobacter
nodosus (strain VCS1703A)
Length = 233
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQE 59
+K P T LQE + +P YE V + GP+H F K+ +A+A S+++A+Q
Sbjct: 156 LKDPKTRLQEYLQSRDLPLPVYELVEEKGPEHAKIFTISAKSERFCTTATASSRKKAEQA 215
Query: 60 AARAMLLC 67
AA + C
Sbjct: 216 AAELLFSC 223
>UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium
nucleatum|Rep: Ribonuclease 3 - Fusobacterium nucleatum
subsp. nucleatum
Length = 234
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
++LQE + K +P YE VA+ GP H FE + A AR+K++A+Q +A+A+
Sbjct: 163 SILQEYVQKEFKTVPTYELVAERGPDHMKEFEIQVIVGNYKEKAVARNKKKAEQLSAKAL 222
Query: 65 LLCL 68
+ L
Sbjct: 223 CIKL 226
Score = 37.1 bits (82), Expect = 0.60
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 105 DSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQ 164
D + ++L+E ++ Y LVA+ GP HM+ F ++ +G + A K++A Q
Sbjct: 157 DILDFKSILQEYVQKEFKTVPTYELVAERGPDHMKEFEIQVIVGNYKEKAVARNKKKAEQ 216
Query: 165 KAAADL 170
+A L
Sbjct: 217 LSAKAL 222
>UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, RNA
binding protein, homolog 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to staufen, RNA
binding protein, homolog 2 - Tribolium castaneum
Length = 480
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQE 59
+K+PIT + E E+ +++SG HQ F CK LG+ V+ RSK+E+K+
Sbjct: 229 LKSPITRVHEAAQLNNLALEFNVISESGKPHQRNFVTECK-LGDYVTEGEGRSKKESKRV 287
Query: 60 AARAML 65
AA ML
Sbjct: 288 AAEKML 293
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 97 SEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASG 156
S+ ++ VA + EL + ++ Y L+++ GP H ++F V +G + SG
Sbjct: 6 SQNNVTKTPEKNIVATIYELAQFNEIE-CSYTLISEEGPPHAKIFKVSLHLGDELYEGSG 64
Query: 157 TTKRQARQKAA 167
++ ++A+Q AA
Sbjct: 65 SSLKKAQQAAA 75
>UniRef50_Q4SKQ4 Cluster: Chromosome undetermined SCAF14565, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14565,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 812
Score = 43.6 bits (98), Expect = 0.007
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
PG++Y +V+ TGP H +FS+ + + + +G TK++A+ KAA
Sbjct: 113 PGLQYHMVSQTGPVHAPVFSIAVEVNGLTFEGTGPTKKKAKMKAA 157
>UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma
proteobacterium HTCC2207|Rep: Ribonuclease III - gamma
proteobacterium HTCC2207
Length = 225
Score = 43.6 bits (98), Expect = 0.007
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 MKTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCK--ALGESVSASARSKREAK 57
+K T LQE + G+ +PEY V G H F CK A+ E+ A+A S+R+A+
Sbjct: 152 VKDAKTALQEWLQARGKPLPEYRVVKTEGEDHSRLFTMSCKIDAVDETAEATASSRRKAE 211
Query: 58 QEAARAMLLCLSTI 71
Q A ++ L I
Sbjct: 212 QLVAEKLVKKLENI 225
>UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 6 SCAF14544, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 687
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 86 PSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRA 145
P Q+ E E + S+S ++L+ E+ + L V + ++ ++GP HM+ F R
Sbjct: 247 PERPPQNTEEKGESDDSSDASKSEISLVYEIALKRNLC-VNFEVLKESGPPHMKSFLTRV 305
Query: 146 SIGLHSRDASGTTKRQARQKAAADL 170
++G S + G +K+ ++++AA +
Sbjct: 306 TVGEFSAEGEGNSKKLSKKRAAISI 330
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 126 EYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHERAMERLVET 185
+Y L+++ GPAH ++F+V+ ++G +A GT+ ++A+ AA RA+E V
Sbjct: 25 QYKLLSERGPAHAKIFTVQLALGEQVWEAEGTSIKKAQHSTAA--------RALEESVLP 76
Query: 186 TPAPWKP 192
PAP P
Sbjct: 77 RPAPRSP 83
Score = 34.7 bits (76), Expect = 3.2
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K+ I+++ E+ +K +E + +SGP H +F R S SK+ +K+ AA
Sbjct: 268 KSEISLVYEIALKRNLCVNFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAA 327
Query: 62 RAMLLCLSTIGHRVPPPFATEFTQPS-HSNQSAGECSEGKAPTVDSRSYVALLKELCEEY 120
++L L + P +P H + + + ++ L ++ +
Sbjct: 328 ISILQDLKKL------PIIPAVEKPKLHYKKRTKTILKTGPDYGQGMNPISRLAQIQQAK 381
Query: 121 KLPGVEYALVADTGPAHMRLFSVRA-SIGLHSRDASGTTKRQARQKAAADL 170
K EY L+++ G R F ++ + G + + AS T QK L
Sbjct: 382 KEKEPEYVLLSERGMPRRREFIMQMDNKGWNGQKASFTEATSNTQKGLLHL 432
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 106 SRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQK 165
+R+Y +LL+EL + Y ++ +TGP H + F R S G + SG K+ A+Q
Sbjct: 157 NRNYKSLLQELTQATDGKAPTYEIIDETGPDHDKTFHCRVSAGDIQAEGSGKNKKTAQQD 216
Query: 166 AA 167
AA
Sbjct: 217 AA 218
Score = 42.3 bits (95), Expect = 0.016
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 6 TVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
++LQE+ G+ P YE + ++GP H TF R A S ++K+ A+Q+AA
Sbjct: 162 SLLQELTQATDGKAPTYEIIDETGPDHDKTFHCRVSAGDIQAEGSGKNKKTAQQDAAHKA 221
Query: 65 L 65
L
Sbjct: 222 L 222
>UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribonuclease III -
Neorickettsia sennetsu (strain Miyayama)
Length = 222
Score = 42.7 bits (96), Expect = 0.012
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 4 PITVLQEMMMKLGQIPE-YECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
P + LQE++ G P Y + +SGP H FE + G+ A+ +SK+ ++ AAR
Sbjct: 152 PKSTLQELLQAKGMKPPIYNVINRSGPAHLPIFEIEIRVDGKKRRATGKSKKLGEENAAR 211
Query: 63 AML 65
ML
Sbjct: 212 MML 214
>UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3;
Cystobacterineae|Rep: Ribonuclease III -
Anaeromyxobacter sp. Fw109-5
Length = 377
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAAR 62
T LQE+ ++ P Y V + GP H TFE + GE V + RSK++A+Q AA+
Sbjct: 177 TQLQELAQSRVRATPRYRVVGEHGPDHSKTFEVETELRGEVVGRGTGRSKKDAEQAAAK 235
>UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3;
Alphaproteobacteria|Rep: Ribonuclease III -
Methylobacterium extorquens PA1
Length = 256
Score = 42.7 bits (96), Expect = 0.012
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
+ LQE M IP YE V +SGP H F + G E SKR A+QEAARA
Sbjct: 179 SALQEWAMARSLAIPVYEVVERSGPDHAPVFRIAARVEGIEPGYGEGASKRVAEQEAARA 238
Query: 64 ML 65
+L
Sbjct: 239 VL 240
>UniRef50_UPI0000DB79F1 Cluster: PREDICTED: similar to CG8273-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG8273-PA
- Apis mellifera
Length = 485
Score = 42.3 bits (95), Expect = 0.016
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 2 KTPITVLQEMMMK--LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARS--KREAK 57
K P+++L E K LG P YE + GP H+ F F+ K G S S K++AK
Sbjct: 405 KHPVSLLGEYCSKRKLGA-PVYELCFECGPDHRKNFLFKVKVNGIEYKPSVASPNKKQAK 463
Query: 58 QEAARAMLLCLSTIG 72
EAA+ +CL T+G
Sbjct: 464 AEAAQ---ICLQTLG 475
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 103 TVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR--LFSVRASIGLHSRDASGTTKR 160
T++ + V+LL E C + KL Y L + GP H + LF V+ + + + K+
Sbjct: 401 TLEGKHPVSLLGEYCSKRKLGAPVYELCFECGPDHRKNFLFKVKVNGIEYKPSVASPNKK 460
Query: 161 QARQKAA 167
QA+ +AA
Sbjct: 461 QAKAEAA 467
>UniRef50_UPI0000EB3B4C Cluster: Double-stranded RNA-specific
editase B2 (EC 3.5.-.-) (dsRNA adenosine deaminase B2)
(RNA-dependent adenosine deaminase 3) (RNA-editing
deaminase 2) (RNA-editing enzyme 2).; n=2; Eutheria|Rep:
Double-stranded RNA-specific editase B2 (EC 3.5.-.-)
(dsRNA adenosine deaminase B2) (RNA-dependent adenosine
deaminase 3) (RNA-editing deaminase 2) (RNA-editing
enzyme 2). - Canis familiaris
Length = 675
Score = 41.9 bits (94), Expect = 0.021
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
PG++Y +V+ TGP H +F+V + + + +G TK++A+ +AA
Sbjct: 41 PGLQYRMVSQTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAA 85
Score = 33.5 bits (73), Expect = 7.4
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQAT-FEFRCKALGESVSASARSKREAKQEA 60
+ P+ VL E+ L Y C+A+ +A F G + S RSK+ AK +A
Sbjct: 174 RNPVVVLNELRSGL----RYVCLAEPADGQRAKGFVMAVSVDGRTFEGSGRSKKLAKGQA 229
Query: 61 ARAMLLCLSTI 71
ARA L L I
Sbjct: 230 ARAALQALFDI 240
>UniRef50_A1KR30 Cluster: Double stranded RNA activated protein
kinase 1; n=2; Xenopus|Rep: Double stranded RNA
activated protein kinase 1 - Xenopus laevis (African
clawed frog)
Length = 578
Score = 41.9 bits (94), Expect = 0.021
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 14 KLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAMLLCLSTIG 72
K G +++ V +GP H F F+ GE + + K+ A+ AA+ L L
Sbjct: 16 KNGLSYQFKKVEATGPSHDPRFTFQVFVNGEKLGEGQDKKKKGAECMAAKMALSTLKERE 75
Query: 73 HRVPPPFATEFTQPSHS----NQSAGECSE---GKAPTVDSRSYVALLKELCEEYKLPGV 125
+ T Q S S + G S G+ +YV +L ELC+++ L +
Sbjct: 76 NSAATVIQTTSEQDSSSIVFLASNTGSPSAVCIGETENGCDENYVGILHELCQKHTL--I 133
Query: 126 EYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAA 167
L G H+ F +A IG A G K++A++KAA
Sbjct: 134 VTFLDERHGQPHIPEFFCKAVIGKEEFPKAKGKNKKEAKRKAA 176
>UniRef50_Q16P61 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 318
Score = 41.9 bits (94), Expect = 0.021
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 17 QIPEYECVAQSGPQHQATFEFRCKALGESVSASA-RSKREAKQEAARAMLLCLSTI 71
++PE+ CV SGP H FE+ C+ +G V ++K+ AKQ A M+ L +
Sbjct: 118 EMPEFNCVRSSGPSHAPEFEYECR-IGAIVRRGIHKTKKGAKQAACNEMIKTLQAM 172
Score = 39.5 bits (88), Expect = 0.11
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 2 KTPITVLQEMMM-KLGQIPEYECVAQS---GPQHQATFEFRCKALGESVSASARSKREAK 57
KTPIT LQE+ + K P Y + G + F ALG + S RSK+++K
Sbjct: 10 KTPITELQELCVSKKAPHPLYTFTGEEIDGGNPNSKVFTTSVLALGFTSSGIGRSKKDSK 69
Query: 58 QEAARAMLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELC 117
+AA +L L G ++ + + A V S V ++++C
Sbjct: 70 HDAAYKLLKLLFEKG-------LSDIDVDNDEHFLA----------VLSSDKVTEVRDIC 112
Query: 118 EEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADL 170
+ E+ V +GP+H F IG R TK+ A+Q A ++
Sbjct: 113 VQRNFEMPEFNCVRSSGPSHAPEFEYECRIGAIVRRGIHKTKKGAKQAACNEM 165
>UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding protein;
n=51; Euteleostomi|Rep: Spermatid perinuclear
RNA-binding protein - Homo sapiens (Human)
Length = 672
Score = 41.9 bits (94), Expect = 0.021
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 8 LQEMMMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA--- 61
L +M+L QI +Y+ ++QSGP H F G + AS SK+ AK A
Sbjct: 388 LMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKV 447
Query: 62 -RAM---------LLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVA 111
+AM + C+S+ + E T S+S+ + G + + T++ R+
Sbjct: 448 LQAMGYPTGFDADIECMSS-DEKSDNESKNE-TVSSNSSNNTGNSTTETSSTLEVRTQGP 505
Query: 112 LL----KELCEEY--KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQK 165
+L K E K G++Y L+++TG +H + F + + +G K+ A+
Sbjct: 506 ILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKAS 565
Query: 166 AA 167
AA
Sbjct: 566 AA 567
Score = 37.5 bits (83), Expect = 0.45
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAAD-LYLNKHERAMER 181
PG++Y L++ +GP H +F++ + + +ASG +K+ A+ A L + +
Sbjct: 400 PGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDA 459
Query: 182 LVETTPAPWKPDLGQRVSEYHYGLISHTGECTARSRRRLPV-----VLDQCLRRAMVDTD 236
+E + K D + ++TG T + L V +L + +++ +
Sbjct: 460 DIECMSSDEKSDNESKNETVSSNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELN 519
Query: 237 PEKRMAARAVLSET 250
++R ++SET
Sbjct: 520 EKRRGLKYELISET 533
>UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3;
n=75; Euteleostomi|Rep: Interleukin enhancer-binding
factor 3 - Homo sapiens (Human)
Length = 894
Score = 41.5 bits (93), Expect = 0.028
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 12 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 68
+M+L Q+ +Y+ V+Q+GP H F + G S AS SK+ AK A +L +
Sbjct: 406 LMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDM 465
Query: 69 ----------STIGHR------------VPPPFATEFTQPSHSNQSAGECSEGKAPTVDS 106
S+ G P P + PS + S +G T
Sbjct: 466 GLPTGAEGRDSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTKHG 525
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKA 166
++ V L E K G++Y L+++TG +H + F + + +G+ K+ A+ A
Sbjct: 526 KNPVMELNE-----KRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYA 580
Query: 167 A 167
A
Sbjct: 581 A 581
>UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n=1;
unknown|Rep: UPI00015BD56E UniRef100 entry - unknown
Length = 232
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 6 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
T LQE+ K + P Y ++ GP+H+ TF C + SK+ A+QEAA+ M
Sbjct: 161 TALQEITQKKWKERPIYNVISVEGPEHRKTFTVECLFKDLRTTGKGNSKKYAEQEAAKNM 220
Query: 65 L 65
L
Sbjct: 221 L 221
>UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium
petroleiphilum PM1|Rep: Ribonuclease III - Methylibium
petroleiphilum (strain PM1)
Length = 248
Score = 41.1 bits (92), Expect = 0.037
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 2 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGES--VSASARSKREAKQ 58
+ P T LQE + Q +P Y + G QH+ F C S V RS+R A+Q
Sbjct: 171 RDPKTELQEWLQARRQPVPGYRIESTRGRQHEQMFTVVCSIPSRSLEVRGEGRSRRAAEQ 230
Query: 59 EAARAMLLCL 68
EAARA L L
Sbjct: 231 EAARAALATL 240
>UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacter
eiseniae EF01-2|Rep: Ribonuclease III -
Verminephrobacter eiseniae (strain EF01-2)
Length = 247
Score = 41.1 bits (92), Expect = 0.037
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAKQEAAR 62
T LQE + + + P+Y+ VA+ G H TFE C ALG + SA S++ +Q AA
Sbjct: 177 TALQEWLASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQAAAA 236
Query: 63 AMLLCL 68
AML L
Sbjct: 237 AMLATL 242
>UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|Rep:
Ribonuclease 3 - Methylococcus capsulatus
Length = 230
Score = 41.1 bits (92), Expect = 0.037
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 2 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKA--LGESVSASARSKREAKQ 58
K P T LQE+M G +P Y + QSG H F RC+ E S+++A+Q
Sbjct: 153 KDPKTRLQELMQGRGLPLPVYTLIDQSGLPHDQHFRVRCEVPLAVEPCVGEGSSRKKAEQ 212
Query: 59 EAARAMLLCLS 69
+AA ML LS
Sbjct: 213 QAAENMLSRLS 223
>UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Ribonuclease 3 -
Protochlamydia amoebophila (strain UWE25)
Length = 242
Score = 40.7 bits (91), Expect = 0.049
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRD---ASGTTKRQAR 163
R++ ALL++ C++ Y ++ ++GP H ++F + S+ + R+ GT+K++A+
Sbjct: 171 RNWKALLQDYCQKNYQQTPLYQVLHESGPDHSKVFQI--SVWIQDRELGRGKGTSKKEAQ 228
Query: 164 QKAAAD 169
Q AAAD
Sbjct: 229 QAAAAD 234
>UniRef50_P19525 Cluster: Interferon-induced, double-stranded
RNA-activated protein kinase; n=14; Eutheria|Rep:
Interferon-induced, double-stranded RNA-activated
protein kinase - Homo sapiens (Human)
Length = 551
Score = 40.7 bits (91), Expect = 0.049
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 19/167 (11%)
Query: 8 LQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLL 66
L K G + +Y+ + SGP H F F+ G E RSK+EAK AA+ +
Sbjct: 14 LNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVE 73
Query: 67 CLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVE 126
L+ V P T +N S G + +Y+ L+ + ++ +L V
Sbjct: 74 ILNKEKKAVSPLLLTT------TNSSEG---------LSMGNYIGLINRIAQKKRLT-VN 117
Query: 127 YALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQARQKAAADLYL 172
Y A +G F + +G +G+TK++A+Q AA YL
Sbjct: 118 YEQCA-SGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYL 163
>UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1;
Psychroflexus torquis ATCC 700755|Rep: DsRNA-specific
ribonuclease - Psychroflexus torquis ATCC 700755
Length = 183
Score = 40.3 bits (90), Expect = 0.065
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 6 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
T LQE MK +P YE V+Q+G H TF LG + S+R A+Q AA
Sbjct: 114 TELQEWAMKRKHAMPAYEIVSQTGLAHAPTFHVSVTVLGVTAEGEGASRRLAEQAAAAKC 173
Query: 65 LLCLS 69
L L+
Sbjct: 174 LHALA 178
>UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|Rep:
Ribonuclease 3 - Zymomonas mobilis
Length = 223
Score = 40.3 bits (90), Expect = 0.065
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 2 KTPITVLQEMMMKLGQIPE-YECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 59
K P + LQE + P YE V+++GPQH F + G SA SK+EA+
Sbjct: 153 KHPKSALQEWAAAHNRRPPVYEIVSRTGPQHNPCFTIQVSIAGVGEASAEGSSKQEAQTA 212
Query: 60 AARAML 65
AA+A+L
Sbjct: 213 AAQALL 218
Score = 34.3 bits (75), Expect = 4.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 127 YALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAAADL 170
Y +V+ TGP H F+++ SI G+ A G++K++A+ AA L
Sbjct: 173 YEIVSRTGPQHNPCFTIQVSIAGVGEASAEGSSKQEAQTAAAQAL 217
>UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep:
Ribonuclease 3 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 243
Score = 40.3 bits (90), Expect = 0.065
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFR-CKALGESVSASARSKREAKQEAA 61
P T LQE K +PEYE + Q+GP H F C V A A SK+ A+Q+AA
Sbjct: 170 PKTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAA 229
Query: 62 RAML 65
ML
Sbjct: 230 ELML 233
Score = 39.5 bits (88), Expect = 0.11
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSR-DASGTTKRQARQKAAADLY 171
L+E ++ KLP EY L+ TGPAH F++ I + + A ++K+ A QK AA+L
Sbjct: 174 LQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQK-AAELM 232
Query: 172 LNK 174
L K
Sbjct: 233 LEK 235
>UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria
(class)|Rep: Ribonuclease 3 - Streptomyces avermitilis
Length = 276
Score = 40.3 bits (90), Expect = 0.065
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 6 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 63
T LQE+ G +PEY V ++GP H+ TF + G S + + RSK+EA+Q+AA +
Sbjct: 177 TSLQELTATEGLGVPEY-LVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAES 235
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 GVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAAADLYLNKHERAMER 181
GV LV +TGP H + F+ A + G+ +G +K++A Q+AA + A ER
Sbjct: 189 GVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRAIRSAADER 247
>UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|Rep:
Ribonuclease 3 - Aquifex aeolicus
Length = 221
Score = 40.3 bits (90), Expect = 0.065
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKA 166
+ Y +L+E+ ++ EY L++ GP H + F V A I + G +K++A Q+A
Sbjct: 150 KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRA 209
Query: 167 AADL 170
A +L
Sbjct: 210 AEEL 213
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 6 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
T+LQE+ K + PEY ++ GP H+ F K +SK+EA+Q AA +
Sbjct: 154 TILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEEL 213
Query: 65 LLCL 68
+ L
Sbjct: 214 IKLL 217
>UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Thiomicrospira crunogena (strain XCL-2)
Length = 233
Score = 39.9 bits (89), Expect = 0.085
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 KTPITVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAKQ 58
K P T LQE + Q+PEY + +GP H F C L A+A ++R+A+Q
Sbjct: 158 KDPKTRLQEFLQSNREQLPEYSVMTVNGPAHAQEFTVSCYVAKLNRKFEATATNRRKAEQ 217
Query: 59 EAARAML 65
AA+ L
Sbjct: 218 VAAQEAL 224
>UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces maris
DSM 8797|Rep: Ribonuclease III - Planctomyces maris DSM
8797
Length = 247
Score = 39.9 bits (89), Expect = 0.085
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 103 TVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQ 161
+V +Y +LL++ ++ Y ++ + GP H + F V A IG H + A G+TK++
Sbjct: 160 SVHGYNYKSLLQQYSQKKFSQTPIYEVLDEKGPDHSKFFKVTAIIGEHKYEPAWGSTKKE 219
Query: 162 ARQKAA 167
A Q+AA
Sbjct: 220 AEQRAA 225
>UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2;
Magnetospirillum|Rep: Ribonuclease III -
Magnetospirillum gryphiswaldense
Length = 229
Score = 39.9 bits (89), Expect = 0.085
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
T LQE LG+ +P Y V Q GP H TF G + V + SKR A+Q AA
Sbjct: 163 TALQEWAQGLGKPLPVYTVVGQDGPPHDPTFVVSVTVEGVDPVHGTGASKRVAEQAAAAL 222
Query: 64 ML 65
+L
Sbjct: 223 LL 224
>UniRef50_Q7Z6F6 Cluster: Interferon-inducible double-stranded
RNA-dependent protein kinase; n=4; Homo/Pan/Gorilla
group|Rep: Interferon-inducible double-stranded
RNA-dependent protein kinase - Homo sapiens (Human)
Length = 510
Score = 39.9 bits (89), Expect = 0.085
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 19/167 (11%)
Query: 8 LQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLL 66
L K G + +Y+ + SGP H F F+ G E RSK+EAK AA+ +
Sbjct: 14 LNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVE 73
Query: 67 CLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVE 126
L+ V P T +N S G + +Y+ L+ + ++ +L V
Sbjct: 74 ILNKEKKAVSPLLLTT------TNSSEG---------LSMGNYMGLINRIAQKKRLT-VN 117
Query: 127 YALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQARQKAAADLYL 172
Y A +G F + +G +G+TK++A+Q AA YL
Sbjct: 118 YEQCA-SGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYL 163
>UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Rep:
Ribonuclease 3 - Lactobacillus plantarum
Length = 231
Score = 39.9 bits (89), Expect = 0.085
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 6 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSAS-ARSKREAKQEAAR 62
T LQE + + G + +Y+ + Q GP ++ ++E A G+ + SK+EA+Q AAR
Sbjct: 164 TTLQEYLQRDGDVAIDYQLIEQDGPANERSYEIAVLADGQKIGEGWGHSKKEAEQSAAR 222
>UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep:
Ribonuclease 3 - Anaplasma marginale (strain St. Maries)
Length = 232
Score = 39.9 bits (89), Expect = 0.085
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 4 PITVLQEMMMKLG-QIPEYECVAQSGPQHQATF--EFRCKALGESVSASARSKREAKQEA 60
P T LQE + G +P Y+ V++SGP+H+ F E + G +V + SK+ A+QEA
Sbjct: 162 PKTALQEWVQGRGWAMPLYKLVSKSGPEHKPVFAVEVSIQEHG-NVLGTGSSKKLAEQEA 220
Query: 61 ARAML 65
A+ ML
Sbjct: 221 AKLML 225
Score = 33.5 bits (73), Expect = 7.4
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 127 YALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQARQKAA 167
Y LV+ +GP H +F+V SI H +G++K+ A Q+AA
Sbjct: 180 YKLVSKSGPEHKPVFAVEVSIQEHGNVLGTGSSKKLAEQEAA 221
>UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;
n=84; Coelomata|Rep: Double-stranded RNA-specific
editase 1 - Homo sapiens (Human)
Length = 741
Score = 39.9 bits (89), Expect = 0.085
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
PG++Y L++ TGP H LF + + + SG TK++A+ AA
Sbjct: 91 PGLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAA 135
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 2 KTPITVL-QEMMMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 57
KTP VL + +M+L +I +Y ++Q+GP H F + G+ S +K++AK
Sbjct: 72 KTPGPVLPKNALMQLNEIKPGLQYTLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAK 131
Query: 58 QEAARAML 65
AA L
Sbjct: 132 LHAAEKAL 139
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K P+ +L E+ L +Y+ +++SG H +F G+ S R+K+ AK AA
Sbjct: 234 KNPVMILNELRPGL----KYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAA 289
Query: 62 RAMLLCL 68
++ L +
Sbjct: 290 QSALAAI 296
>UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 247
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 63
T LQE + L +P Y+ + Q GP HQ F+ G+ S +SK+EA+Q+AA+
Sbjct: 167 TDLQEYCQRELETLPVYQVMDQRGPDHQKEFDVAVLIRGKIYGEGSGKSKKEAEQKAAKD 226
Query: 64 MLLCLSTIGHRVPPP 78
L L+ V P
Sbjct: 227 ALSRLARTSRDVLQP 241
>UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|Rep:
Ribonuclease 3 - Streptococcus pneumoniae
Length = 232
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 6 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAAR 62
T LQE++ G + Y+ ++++GP H F+ G+S+ RSK+ A+QEAA+
Sbjct: 163 THLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAK 221
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 109 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAA 167
Y L+EL + + Y ++++TGPAH ++F V + G G +K+ A Q+AA
Sbjct: 161 YKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAA 220
>UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep:
Ribonuclease III - Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 229
Score = 39.1 bits (87), Expect = 0.15
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 2 KTPITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRC--KALGESVSASARSKREAKQ 58
K P T LQE + + +P YE ++ G H TF C +L + + S+R A+Q
Sbjct: 155 KDPKTRLQEYLQSRQFPLPRYEVISVDGEAHNQTFHVSCALPSLDRKTTGTGSSRRVAEQ 214
Query: 59 EAARAML 65
+AAR L
Sbjct: 215 QAARNAL 221
>UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila
melanogaster|Rep: AT18855p - Drosophila melanogaster
(Fruit fly)
Length = 886
Score = 39.1 bits (87), Expect = 0.15
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 86 PSHSNQSAGECSEGKAPTVDSRSY-VALLKELCEEYKLPGVEYALVADTGPAHMR--LFS 142
P + Q AG P V + V +L EL + K +Y L D GPAH R LFS
Sbjct: 789 PCPAVQGAGPGPLASTPLVTQDKHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNRSFLFS 848
Query: 143 VRASIGLHSRDASGTTKRQARQKAAA 168
V + + D K++A+ AAA
Sbjct: 849 VEINGQTFTPDRGSNNKKEAKLNAAA 874
Score = 36.7 bits (81), Expect = 0.79
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 2 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVS--ASARSKREAKQ 58
K P+ VL E+ K +P +Y+ GP H +F F + G++ + + +K+EAK
Sbjct: 811 KHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNRSFLFSVEINGQTFTPDRGSNNKKEAKL 870
Query: 59 EAARAMLLCLSTIGHRVPP 77
AA LCL ++G +PP
Sbjct: 871 NAA---ALCLRSLG-ILPP 885
>UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila
pseudoobscura|Rep: GA20947-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 851
Score = 39.1 bits (87), Expect = 0.15
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 2 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSAS--ARSKREAKQ 58
K P+ VL E+ K P +Y +SGP H +F F + G+S + +K+EAK
Sbjct: 776 KHPVCVLNELTSKNRWTPPQYILQQESGPSHIRSFLFSVEINGQSYTPDRPCNNKKEAKL 835
Query: 59 EAARAMLLCLSTIG 72
AA+ LCL ++G
Sbjct: 836 NAAK---LCLESLG 846
Score = 36.3 bits (80), Expect = 1.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 94 GECSEGKAP---TVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMR--LFSVRASIG 148
G +G AP TVD V +L EL + + +Y L ++GP+H+R LFSV +
Sbjct: 761 GPSGQGVAPMVVTVDKHP-VCVLNELTSKNRWTPPQYILQQESGPSHIRSFLFSVEINGQ 819
Query: 149 LHSRDASGTTKRQARQKAA 167
++ D K++A+ AA
Sbjct: 820 SYTPDRPCNNKKEAKLNAA 838
>UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema
denticola|Rep: Ribonuclease 3 - Treponema denticola
Length = 246
Score = 39.1 bits (87), Expect = 0.15
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAAR 62
++LQE++ K +P+YE SGP H TF F G+ S ++K+EA+Q A+
Sbjct: 174 SLLQELVQKKFKTVPKYELKKASGPDHDRTFWFSVSINGKVYGPLSGKTKKEAEQSVAK 232
>UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium
thermophilum|Rep: Ribonuclease 3 - Symbiobacterium
thermophilum
Length = 235
Score = 39.1 bits (87), Expect = 0.15
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 6 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGESVSAS-ARSKREAKQEAARA 63
T LQE + + G P+Y + + GP H F+ G + R+K+EA+QEAAR
Sbjct: 167 TQLQEQLQRQGAAAPQYRLLVEEGPAHLRRFQVGVYFEGRLLGTGWGRNKKEAEQEAARQ 226
Query: 64 MLL 66
L+
Sbjct: 227 ALM 229
Score = 34.3 bits (75), Expect = 4.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 109 YVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAA 167
Y L+E + +Y L+ + GPAH+R F V G G K++A Q+AA
Sbjct: 165 YKTQLQEQLQRQGAAAPQYRLLVEEGPAHLRRFQVGVYFEGRLLGTGWGRNKKEAEQEAA 224
Query: 168 ADLYLNKH 175
+ +H
Sbjct: 225 RQALMPEH 232
>UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4;
Alphaproteobacteria|Rep: Ribonuclease 3 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 231
Score = 39.1 bits (87), Expect = 0.15
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 2 KTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQE 59
+ P T LQE G+ +P Y + ++GP H F G + A +S++EA++
Sbjct: 160 RDPKTALQEWAQGQGRPLPTYRVLDRTGPDHAPVFTVEVSVTGVDPAIAKGKSRQEAEKA 219
Query: 60 AARAML 65
AA+A+L
Sbjct: 220 AAKALL 225
>UniRef50_O36966 Cluster: Replicase polyprotein; n=1; Drosophila C
virus|Rep: Replicase polyprotein - Drosophila C virus
Length = 1759
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 20 EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCLS 69
+Y+ A P+ F C+ LG ++ K+ KQEAAR MLL LS
Sbjct: 40 KYDFDAVESPREAPVFRCTCRFLGYTIMTQGIGKKNPKQEAARQMLLLLS 89
>UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp.
MC-1|Rep: Ribonuclease III - Magnetococcus sp. (strain
MC-1)
Length = 246
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 63
T+LQE + G+ +P Y ++ GP H+ F C + RSKREA+Q AA+
Sbjct: 173 TLLQEYLQARGEALPIYAVLSAEGPPHERVFVVSCHPREQLCGHGQGRSKREAEQHAAQQ 232
Query: 64 ML 65
L
Sbjct: 233 AL 234
>UniRef50_A7SFG1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 580
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 119 EYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
EYK PG+E+ LV+ GP H F V ++ + + G++K++A+ AA
Sbjct: 5 EYK-PGLEFRLVSQEGPPHDTTFVVAVTVNGQTYEGKGSSKQRAKHDAA 52
Score = 36.7 bits (81), Expect = 0.79
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 20 EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCLSTIGHRVPPPF 79
E+ V+Q GP H TF G++ SK+ AK +AA L + + +
Sbjct: 11 EFRLVSQEGPPHDTTFVVAVTVNGQTYEGKGSSKQRAKHDAAEKALQSCVQLPFNIKTEY 70
Query: 80 A---TEFTQPSHSNQSAGECSEGKAPTVD 105
A +FT + N S E SE T D
Sbjct: 71 APTNEDFTADATGN-SFTENSENGQKTSD 98
>UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Ribonuclease 3 - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 38.7 bits (86), Expect = 0.20
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 63
T LQE + + G +P+Y + GP HQ ++ G + RSK+ A+Q AA+
Sbjct: 166 TRLQERLQARFGDVPQYVLIHADGPPHQRSYSVEAHFRGSCIGQGQGRSKKSAEQAAAKQ 225
Query: 64 ML 65
L
Sbjct: 226 AL 227
>UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Ribonuclease III -
Desulfuromonas acetoxidans DSM 684
Length = 244
Score = 38.3 bits (85), Expect = 0.26
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 106 SRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQ 164
S Y +EL + EY LVA GP H R ++V S G H SG +K+ A+Q
Sbjct: 166 SLDYKTRFQELAQARFGAAPEYELVATEGPDHQREYTVIVSCEGRHLGQGSGGSKKAAQQ 225
Query: 165 KAA 167
+AA
Sbjct: 226 QAA 228
Score = 37.9 bits (84), Expect = 0.34
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARA 63
T QE+ + G PEYE VA GP HQ + G + S SK+ A+Q+AA
Sbjct: 171 TRFQELAQARFGAAPEYELVATEGPDHQREYTVIVSCEGRHLGQGSGGSKKAAQQQAACQ 230
Query: 64 MLLCL 68
L L
Sbjct: 231 ALKAL 235
>UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis
alaskensis|Rep: Ribonuclease III - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 226
Score = 38.3 bits (85), Expect = 0.26
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 2 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQ 58
K P LQE + G+ P EYE V++ GP H F ++G+ A A+ SK+ A++
Sbjct: 153 KHPKAALQEWALARGRRPPEYEIVSREGPDHAPRFRI-AVSIGKLARAEAQGASKQAAEK 211
Query: 59 EAARAML 65
AA A+L
Sbjct: 212 AAAAALL 218
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 126 EYALVADTGPAHMRLFSVRASIGLHSR-DASGTTKRQARQKAAADL 170
EY +V+ GP H F + SIG +R +A G +K+ A + AAA L
Sbjct: 172 EYEIVSREGPDHAPRFRIAVSIGKLARAEAQGASKQAAEKAAAAAL 217
>UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Ribonuclease III -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 233
Score = 38.3 bits (85), Expect = 0.26
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 6 TVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSK-REAKQEAARAM 64
T+LQE + G P Y +++ GP H+ F GE V+ S ++++Q AARA
Sbjct: 154 TLLQETLQAEGLRPTYRVISKQGPPHRPVFISGVSVDGEEVATGRGSSIKQSEQAAARAA 213
Query: 65 L 65
L
Sbjct: 214 L 214
>UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera
araneosa HTCC2155|Rep: Ribonuclease III - Lentisphaera
araneosa HTCC2155
Length = 232
Score = 38.3 bits (85), Expect = 0.26
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MKTPITVLQEMMMKL-GQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQ 58
++ P LQE+ K G P+Y ++++GP+H ++ C E +S ++ + A++
Sbjct: 158 VQNPKGTLQELTQKNHGSPPKYITISKTGPEHDPLYKVECILNKELISKGQGKTLKAAQE 217
Query: 59 EAARAMLLCL 68
AAR + CL
Sbjct: 218 NAARKAIHCL 227
>UniRef50_A1WT17 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 234
Score = 38.3 bits (85), Expect = 0.26
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 1 MKTPITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG--ESVSASARSKREAK 57
+K P T LQE++ + +P Y+ + G H F+ C+ ++ A S+R+A+
Sbjct: 151 LKDPKTRLQEVLQSTRRPLPGYQVLDVRGRAHHQRFQVECRLSDSEQTTLGEAGSRRQAE 210
Query: 58 QEAARAMLL 66
Q AA AML+
Sbjct: 211 QRAAEAMLV 219
>UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 118
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 2 KTPITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEA 60
K PI++LQE+ K Q+P+++ + GP H F F+ G S + KQ
Sbjct: 40 KHPISMLQEICARKKWQLPDFQLIFDHGPPHSKQFLFKVAVNGYEYQPQVVSSNK-KQAK 98
Query: 61 ARAMLLCLSTIG 72
A+ L L IG
Sbjct: 99 AQCALYALKAIG 110
Score = 33.1 bits (72), Expect = 9.8
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 110 VALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAAD 169
+++L+E+C K ++ L+ D GP H + F + ++ + + + + KA
Sbjct: 43 ISMLQEICARKKWQLPDFQLIFDHGPPHSKQFLFKVAVNGYEYQPQVVSSNKKQAKAQCA 102
Query: 170 LYLNK 174
LY K
Sbjct: 103 LYALK 107
>UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. PCC
6803|Rep: Ribonuclease 3 - Synechocystis sp. (strain PCC
6803)
Length = 231
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 9 QEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAARAMLLC 67
Q + K Q+PEYE + SGP H F F K G+ S SK+ A ++AA L
Sbjct: 167 QWALAKTKQLPEYELINTSGPPHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKS 226
Query: 68 LSTI 71
L +
Sbjct: 227 LGLL 230
>UniRef50_Q9YWP6 Cluster: Vp8; n=1; Kadipiro virus|Rep: Vp8 -
Kadipiro virus
Length = 302
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7 VLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAM 64
+LQE+ +K G ++P YE +++ GP H T + A G V +A S+ +A++ AA +
Sbjct: 7 MLQELCVKRGLELPVYEKLSKVGPDHAPTITVKLTANGIEVIEAASSRAQAEKLAAATL 65
>UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 252
Score = 37.9 bits (84), Expect = 0.34
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 98 EGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIG-LHSRDASG 156
E K DS++ +L+E+ + G+ Y L+ + GP H + F+V IG SG
Sbjct: 174 ENKKLFYDSKT---ILQEIVQADMEEGISYHLIKEEGPDHNKSFTVEVKIGETVYGTGSG 230
Query: 157 TTKRQARQKAA 167
TK+ A Q+AA
Sbjct: 231 RTKKAAEQEAA 241
Score = 37.5 bits (83), Expect = 0.45
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQEAAR 62
T+LQE++ + + Y + + GP H +F K +GE+V + S R+K+ A+QEAA
Sbjct: 184 TILQEIVQADMEEGISYHLIKEEGPDHNKSFTVEVK-IGETVYGTGSGRTKKAAEQEAAY 242
Query: 63 AMLLCL 68
+L L
Sbjct: 243 KAILKL 248
>UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 377
Score = 37.9 bits (84), Expect = 0.34
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 102 PTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKR 160
P S +Y LL++ C+ Y ++ + GPAH R F + + G +A GTTKR
Sbjct: 196 PRAGSLNYKLLLQKWCQSKAEELPVYQVLEEIGPAHQRRFRLGVFLKGKQLGEAEGTTKR 255
Query: 161 QARQKAAADLY 171
A AA + +
Sbjct: 256 GASVHAAKNAW 266
>UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16; Staphylococcus|Rep:
Ribonuclease 3 - Staphylococcus epidermidis (strain ATCC
12228)
Length = 245
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 125 VEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAAADLY-LNKHERAM 179
V Y L+ + GPAH RLF+ + + + G TK+++ QKAA Y L K+++++
Sbjct: 189 VTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL 245
>UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease 3 - Bdellovibrio
bacteriovorus
Length = 234
Score = 37.9 bits (84), Expect = 0.34
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 6 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSAS--ARSKREAKQEAAR 62
T LQE++ K + P YE +A+ GP H F C + E V A RSK+ A+Q AA+
Sbjct: 165 TRLQELVQKSSKETPRYEVLAEEGPPHDREF-LVCVKVKEDVWAQGRGRSKKNAEQMAAK 223
Query: 63 AML 65
L
Sbjct: 224 NAL 226
>UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10493,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 673
Score = 37.5 bits (83), Expect = 0.45
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 12 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 68
+M+L QI +Y ++QSGP H F G AS SK+ AK A +L +
Sbjct: 348 LMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDVDGTVYEASGSSKKTAKLHVAVKVLQAM 407
Query: 69 ---STIGHRVPPPFATEFTQPSHSNQSAGECSEG----KAP-TVDSRSYVALL----KEL 116
+ + P + E + ++++ S +P T++ R+ +L K
Sbjct: 408 GYPTGFDSDLDPMSSDEKSDGESKSETSSHTSNNPTHPDSPNTLEVRTQGPILTASGKNP 467
Query: 117 CEEY--KLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
E K G++Y L++++G +H + F + + +G K+ A+ AA
Sbjct: 468 VMELNEKRRGLKYDLISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA 520
>UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus
aciditrophicus SB|Rep: Ribonuclease III - Syntrophus
aciditrophicus (strain SB)
Length = 240
Score = 37.5 bits (83), Expect = 0.45
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
T LQE+ + +IP Y + + GP H FE G + +SK+EA+Q AA
Sbjct: 168 TTLQELSQNRFREIPRYRLIGEYGPDHDKLFESGLSIPGIIETTGKGKSKKEAEQHAAHK 227
Query: 64 ML 65
L
Sbjct: 228 AL 229
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQ- 164
+ Y L+EL + Y L+ + GP H +LF SI G+ G +K++A Q
Sbjct: 164 KDYKTTLQELSQNRFREIPRYRLIGEYGPDHDKLFESGLSIPGIIETTGKGKSKKEAEQH 223
Query: 165 ---KAAADLYLNKHE 176
KA +L N HE
Sbjct: 224 AAHKALDELLKNTHE 238
>UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 394
Score = 37.5 bits (83), Expect = 0.45
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 7 VLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAM 64
+LQE K+ IP Y C P A+F + G + A+AR+K+EA+ +AAR
Sbjct: 99 LLQEYAQKMNYAIPMYVCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTA 158
Query: 65 LLCL 68
LL +
Sbjct: 159 LLAI 162
>UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus
Pelagibacter ubique|Rep: Ribonuclease 3 - Pelagibacter
ubique
Length = 222
Score = 37.5 bits (83), Expect = 0.45
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 6 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
T LQE +K+ ++ P Y+ ++ +GP+H+ F+ K + +A SK++A+Q AA
Sbjct: 155 TKLQEYSLKIFKVLPIYKLISNTGPRHKPLFKVAVKLKNTKFFTAEGTSKKDAEQNAAS- 213
Query: 64 MLLCLSTI 71
LCL I
Sbjct: 214 --LCLQDI 219
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 127 YALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAAA 168
Y L+++TGP H LF V + A GT+K+ A Q AA+
Sbjct: 171 YKLISNTGPRHKPLFKVAVKLKNTKFFTAEGTSKKDAEQNAAS 213
>UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep:
Ribonuclease 3 - Bacillus halodurans
Length = 263
Score = 37.5 bits (83), Expect = 0.45
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 8 LQEMMMK--LGQIPEYECVAQSGPQHQATFEFRCKALGESVSA-SARSKREAKQEAARAM 64
LQE + + LG I YE V + GP H F E++ + RSK+EA+Q AA+
Sbjct: 195 LQEFIQRDNLGHI-HYEIVQERGPAHNREFVSEVVLNNETLGVGTGRSKKEAEQHAAQQA 253
Query: 65 LLCLS 69
L+ LS
Sbjct: 254 LITLS 258
>UniRef50_UPI00015B62EF Cluster: PREDICTED: similar to conserved
hypothetical protein; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 900
Score = 37.1 bits (82), Expect = 0.60
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 2 KTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGESVSASARS--KREAKQ 58
K P+++L E K P YE + GP H+ F F+ K G + S K+ AK
Sbjct: 827 KHPVSLLGEYCSKRKFGAPVYELCFECGPDHKKNFLFKVKVNGVEYKPAVASPNKKLAKA 886
Query: 59 EAARAMLLCLSTIG 72
EAA+ +CL +IG
Sbjct: 887 EAAQ---VCLQSIG 897
Score = 34.3 bits (75), Expect = 4.2
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 89 SNQSAGECSEGKAP--------TVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRL 140
SN+ G GK P T++ + V+LL E C + K Y L + GP H +
Sbjct: 801 SNEDVGAAKLGKIPKSAVPAVKTLEGKHPVSLLGEYCSKRKFGAPVYELCFECGPDHKKN 860
Query: 141 FSVRASI-GLHSRDASGTTKRQARQKAAADLYL 172
F + + G+ + A + ++ + AA + L
Sbjct: 861 FLFKVKVNGVEYKPAVASPNKKLAKAEAAQVCL 893
>UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha
proteobacterium HTCC2255|Rep: ribonuclease III - alpha
proteobacterium HTCC2255
Length = 241
Score = 37.1 bits (82), Expect = 0.60
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 6 TVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCK--ALGESVSASARSKREAKQEAAR 62
T LQE + G ++P YE V G H TF C L + + A S++ A+Q AA+
Sbjct: 173 TRLQEYLQSRGIELPVYEVVDIKGKDHNQTFTVSCNTVTLSDPIQAQGASRKRAEQIAAQ 232
Query: 63 AML 65
L
Sbjct: 233 LTL 235
>UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=5; root|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 850
Score = 37.1 bits (82), Expect = 0.60
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
PG++Y L++ +GP H +F++ + ++ A+G +KR A+ + A
Sbjct: 522 PGLQYRLLSQSGPVHAPVFTMSVDVQGNTYQATGNSKRTAKLQVA 566
Score = 36.7 bits (81), Expect = 0.79
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 12 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 68
+M+L QI +Y ++QSGP H F G + A+ SKR AK + A L L
Sbjct: 514 LMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDVQGNTYQATGNSKRTAKLQVALKALQAL 573
Query: 69 STI 71
+
Sbjct: 574 GFV 576
>UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Ribonuclease
III - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 233
Score = 37.1 bits (82), Expect = 0.60
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 105 DSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRD-----ASGTTK 159
D Y + L+EL + V YA++ ++GPAH ++F G++ R+ G +K
Sbjct: 158 DYYDYKSKLQELVQARDKENVSYAIIEESGPAHAKVFVA----GVYYREQLLATGEGKSK 213
Query: 160 RQARQKAA 167
++A QKAA
Sbjct: 214 KEAEQKAA 221
>UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Ribonuclease 3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 235
Score = 37.1 bits (82), Expect = 0.60
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASAR--SKREAKQEAAR 62
T LQE++ K + YE + + GP HQ F + + + A+ R SK+EA+QEAA+
Sbjct: 165 TTLQELLQKEKNNVLRYEILLEEGPPHQKIFTAGV-IINDKLIATGRGKSKKEAEQEAAK 223
Query: 63 AML 65
L
Sbjct: 224 KAL 226
>UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep:
Ribonuclease 3 - Brucella abortus
Length = 245
Score = 37.1 bits (82), Expect = 0.60
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 6 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
T LQE + G + P Y +++SGP H F G RSKR A+Q AA A
Sbjct: 172 TELQEWAHQQGNVHPVYAILSRSGPDHDPLFLVEVTVKGFAPEKGEGRSKRIAEQSAAEA 231
Query: 64 ML 65
ML
Sbjct: 232 ML 233
>UniRef50_UPI0000E4A4CD Cluster: PREDICTED: similar to Staufen, RNA
binding protein, homolog 2 (Drosophila), partial; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Staufen, RNA binding protein, homolog 2 (Drosophila),
partial - Strongylocentrotus purpuratus
Length = 486
Score = 36.7 bits (81), Expect = 0.79
Identities = 18/68 (26%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKA 166
+S ++L+ E + L V + ++ + G H+++F ++ ++G + ++ G +K+ A++K
Sbjct: 268 KSDISLIYEAANLHNL-NVVFKVLDERGQPHLKIFKLQCTVGEFNTESEGPSKKDAKRK- 325
Query: 167 AADLYLNK 174
AA+L L K
Sbjct: 326 AAELMLPK 333
>UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
ribonuclease III - Candidatus Kuenenia stuttgartiensis
Length = 236
Score = 36.7 bits (81), Expect = 0.79
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 6 TVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALGESVSAS-ARSKREAKQEAARA 63
++LQ+ K G P Y + Q GP H +FE G +SK+EA+Q AA+
Sbjct: 167 SILQQYSQKEYGITPTYRLLQQIGPDHGKSFEIVVSIKGSEYGRGWGKSKKEAEQSAAKE 226
Query: 64 MLLCLS 69
L L+
Sbjct: 227 ALKILT 232
>UniRef50_Q2TL61 Cluster: Eukaryotic translation initiation factor
2-alpha kinase 2; n=6; Laurasiatheria|Rep: Eukaryotic
translation initiation factor 2-alpha kinase 2 - Equus
caballus (Horse)
Length = 540
Score = 36.7 bits (81), Expect = 0.79
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 5 ITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
I L + K + ++ ++++GP H TF FR G E A +SK+EAK AA+
Sbjct: 11 IEELNKYRQKHNVVLDFRELSKTGPPHDLTFTFRVIINGREFPEAEGKSKKEAKNAAAK- 69
Query: 64 MLLCLSTIGHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLP 123
A E + + + S ++ + + S++Y+ L+ + +L
Sbjct: 70 ---------------MAVEILRENKTVSSLPLLTKDTSEEL-SKNYIGLINTYTQRNQLS 113
Query: 124 -GVEYALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQARQKAAADLY 171
E D GP + F + IG ASG+TK++A+Q AA Y
Sbjct: 114 LNYEQYESRDGGP---KRFRCKYKIGWKEYPIASGSTKQEAKQLAAKLAY 160
>UniRef50_Q9NII1 Cluster: Double-stranded RNA-specific editase Adar;
n=12; Diptera|Rep: Double-stranded RNA-specific editase
Adar - Drosophila melanogaster (Fruit fly)
Length = 676
Score = 36.7 bits (81), Expect = 0.79
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 72 GHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVA 131
G+ P + P +S+ C E + P ++ VA+L EL G+ Y L +
Sbjct: 31 GYNRKLPQKRGYEMPKYSDPKKKMCKE-RIP--QPKNTVAMLNELRH-----GLIYKLES 82
Query: 132 DTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAA 168
TGP H LF++ + G +K+ AR +AAA
Sbjct: 83 QTGPVHAPLFTISVEVDGQKYLGQGRSKKVARIEAAA 119
>UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog. -
Takifugu rubripes
Length = 275
Score = 36.3 bits (80), Expect = 1.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 123 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 167
PG++Y L++ +GP H +F++ I + A+G +KR A+ + A
Sbjct: 163 PGLQYRLLSQSGPVHAPVFTMSVDIQGTTYQATGNSKRTAKLQVA 207
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 12 MMKLGQIP---EYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAMLLCL 68
+M+L QI +Y ++QSGP H F G + A+ SKR AK + A L L
Sbjct: 155 LMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDIQGTTYQATGNSKRTAKLQVALKALQAL 214
Query: 69 STI 71
+
Sbjct: 215 GFV 217
>UniRef50_A3VSG4 Cluster: Ribonuclease III; n=1; Parvularcula
bermudensis HTCC2503|Rep: Ribonuclease III -
Parvularcula bermudensis HTCC2503
Length = 238
Score = 36.3 bits (80), Expect = 1.1
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 6 TVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARA 63
T LQE + G P Y + + GP H F G ES A +KR A+ +AAR+
Sbjct: 167 TALQEWAQEKGLGTPSYRDIDRDGPDHAPIFTVAVVVQGLESAEARGPNKRSAQMQAARS 226
Query: 64 MLL 66
+L+
Sbjct: 227 ILV 229
>UniRef50_Q7PPS2 Cluster: ENSANGP00000020540; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000020540 - Anopheles gambiae
str. PEST
Length = 794
Score = 36.3 bits (80), Expect = 1.1
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 2 KTPITVLQEMMMK-LGQIPEYECVAQSGPQHQATFEFRCKALG-ESVSASA-RSKREAKQ 58
K P+++L E K P YE V +SGP H F F+ G E A A +K+EAK
Sbjct: 720 KHPVSILCEYATKHKWNAPMYELVHESGPGHAKNFIFKVLVNGLEYQPAIANNTKKEAKA 779
Query: 59 EAARAMLLCLSTIG 72
AA+ CL +G
Sbjct: 780 TAAK---FCLQQLG 790
>UniRef50_Q17BU1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 919
Score = 36.3 bits (80), Expect = 1.1
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 2 KTPITVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFR--CKALGESVSASARSKREAKQ 58
K P+++L E K +P Y+ V +SGP H F F+ L + + +K+EAK
Sbjct: 845 KHPVSILGEYCSKRKWMPPRYDLVHESGPGHAKNFVFKVIVNGLEYQPAIANNTKKEAKA 904
Query: 59 EAARAMLLCLSTIG 72
AA+ CL +G
Sbjct: 905 TAAK---FCLQQLG 915
Score = 35.9 bits (79), Expect = 1.4
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 85 QPSHSNQSAGECSEGKAPTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVR 144
Q HS + A S K T D + V++L E C + K Y LV ++GP H + F +
Sbjct: 825 QQQHSGRRARFMSV-KINT-DGKHPVSILGEYCSKRKWMPPRYDLVHESGPGHAKNFVFK 882
Query: 145 ASI-GLHSRDA-SGTTKRQARQKAA 167
+ GL + A + TK++A+ AA
Sbjct: 883 VIVNGLEYQPAIANNTKKEAKATAA 907
>UniRef50_Q7UGZ7 Cluster: Ribonuclease 3; n=3;
Planctomycetaceae|Rep: Ribonuclease 3 - Rhodopirellula
baltica
Length = 266
Score = 36.3 bits (80), Expect = 1.1
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 103 TVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQ 161
T S ++ ++L++ + Y L+ +TGP H ++F + A + A G K+
Sbjct: 180 TQGSGNHKSVLQQFAQRELSATPVYKLIRETGPDHRKMFLMGAMVDDRRFAPAWGNNKKD 239
Query: 162 ARQKAAADLYLNKHERAMERLVETTPA 188
A Q+AAA+ H + E PA
Sbjct: 240 AEQRAAANALAELHNAKVPYDSEQPPA 266
>UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep:
Ribonuclease 3 - Geobacter sulfurreducens
Length = 248
Score = 36.3 bits (80), Expect = 1.1
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQEAAR 62
T QE+ + G +P Y V SGP H F +GE + + RSK+EA+Q AAR
Sbjct: 175 TDFQELAQAQYGGLPRYVLVDTSGPAHDLRFTVAAY-VGERLLGQGTGRSKKEAEQAAAR 233
Query: 63 AMLLCLST 70
L L T
Sbjct: 234 QCLERLET 241
>UniRef50_UPI0001554C21 Cluster: PREDICTED: similar to 65 kD protein
kinase; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to 65 kD protein kinase - Ornithorhynchus
anatinus
Length = 546
Score = 35.9 bits (79), Expect = 1.4
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 105 DSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQAR 163
+ R + A L E C++ L V Y V+ TGP H F+++ I G +ASG++K++A+
Sbjct: 6 EPRIHSAHLHEYCQKRGLKLV-YRDVSKTGPDHNLQFTIQVIIEGREFPEASGSSKKKAK 64
Query: 164 QKAAADLYLNKHERAMERLVETTPAPWKPDLGQRVS 199
AAA L + ER + + P LG VS
Sbjct: 65 D-AAAKLAVKILERENQVPSRLSRLPQFGQLGVGVS 99
>UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium
phytofermentans ISDg|Rep: Ribonuclease III - Clostridium
phytofermentans ISDg
Length = 235
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 112 LLKELCE-EYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRD-ASGTTKRQARQKAA 167
+L+E+ + EYK + Y L+ +TGP H + F+V A + S + +G TK+ A Q+AA
Sbjct: 167 ILQEIVQSEYK-KHLSYELLQETGPDHNKKFTVVAKMDEESLEIGTGRTKKAAEQEAA 223
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 6 TVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 63
T+LQE++ + + YE + ++GP H F K ES+ + R+K+ A+QEAA
Sbjct: 166 TILQEIVQSEYKKHLSYELLQETGPDHNKKFTVVAKMDEESLEIGTGRTKKAAEQEAAYR 225
Query: 64 MLLCL 68
+L L
Sbjct: 226 SILQL 230
>UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:
Adenosine deaminase - Apis mellifera (Honeybee)
Length = 620
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 124 GVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYL 172
G Y +V TGP H +F++ I + + G TK+ A+ AAA+L L
Sbjct: 47 GAVYKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKH-AAAELAL 94
>UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris
aestuarii DSM 271|Rep: Ribonuclease III -
Prosthecochloris aestuarii DSM 271
Length = 277
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 19 PEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAMLLCLST 70
P+Y + + G +HQ TF G+ + +A K++A+Q AAR LL L +
Sbjct: 218 PQYTIIREEGAEHQKTFTVEVSFDGKPFGTGTAARKKDAEQAAARRALLLLQS 270
>UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum
reducens MI-1|Rep: Ribonuclease III - Desulfotomaculum
reducens MI-1
Length = 246
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 6 TVLQEMMMKLGQIP-EYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEAARA 63
T LQE++ + P Y + +SGP H TF G+ + S SK+EA+Q+AA+
Sbjct: 167 TELQEILQQSSPDPLTYTIMDESGPDHDKTFTAGVIYKGKVIGKGSGHSKKEAEQQAAKD 226
Query: 64 MLLCLSTIG 72
L +G
Sbjct: 227 AFQHLEGMG 235
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 107 RSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQK 165
R Y L+E+ ++ + Y ++ ++GP H + F+ G SG +K++A Q+
Sbjct: 163 RDYKTELQEILQQSSPDPLTYTIMDESGPDHDKTFTAGVIYKGKVIGKGSGHSKKEAEQQ 222
Query: 166 AAADLY 171
AA D +
Sbjct: 223 AAKDAF 228
>UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovleyi
SZ|Rep: Ribonuclease III - Geobacter lovleyi SZ
Length = 228
Score = 35.5 bits (78), Expect = 1.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAA 167
L+EL K Y LV GP H RLF + S+ G+ G +K+ A+Q AA
Sbjct: 164 LQELLAARKQAAPVYNLVDQQGPDHDRLFCIEVSVDGMPLGQGQGRSKKAAQQSAA 219
>UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep:
Ribonuclease 3 - Rhodopseudomonas palustris
Length = 272
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 1 MKTPITVLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQ 58
++ P TVLQE G P Y V ++GP H F G E SKR A++
Sbjct: 194 LRDPKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEK 253
Query: 59 EAARAML 65
AA AML
Sbjct: 254 VAASAML 260
>UniRef50_Q0P4K2 Cluster: Putative uncharacterized protein
MGC147195; n=3; Euteleostomi|Rep: Putative
uncharacterized protein MGC147195 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 552
Score = 35.1 bits (77), Expect = 2.4
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 13 MKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASA-RSKREAKQEAARAMLLCLSTI 71
+K G + V +GP H F + E + + K+ A+ AA+ LL L
Sbjct: 15 IKNGLAYHFNEVEATGPSHDPRFTSQVFVNQEKLGEGQDKKKKGAENIAAKMALLTLKER 74
Query: 72 GHRVPPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-------SYVALLKELCEEYKLPG 124
+ V + Q S S SE P + +YV L ELC+++KL
Sbjct: 75 ENSVAAAEQSTSEQDSSSIVFLASNSENPVPATSTEMENGCEGNYVGKLHELCQKHKL-- 132
Query: 125 VEYALVADTGPAHMRLFSVRASIGLHS-RDASGTTKRQARQKAA 167
+ G H+ F + IG G K++A++KAA
Sbjct: 133 ICKFFDECYGLPHIPEFWCKVVIGEEEFHKVKGNNKKEAKRKAA 176
>UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter ruber
DSM 13855|Rep: Ribonuclease III - Salinibacter ruber
(strain DSM 13855)
Length = 248
Score = 35.1 bits (77), Expect = 2.4
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 8 LQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGESV--SASARSKREAKQEAARAM 64
L E + LG+ P Y V + GP H TF + +G++ +A SK++A+Q+AAR
Sbjct: 179 LLEHLQALGRPQPTYHVVEEKGPSHDKTFTVEVR-VGDAAYERGTAGSKQDAEQQAARRT 237
Query: 65 L 65
L
Sbjct: 238 L 238
>UniRef50_Q4T7L5 Cluster: Chromosome 14 SCAF8084, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF8084, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 470
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 101 APTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAH------MRLFSVRASIGLHSRDA 154
A T +SY+ L +E+ E + LP EY ++ T H +R+FS + S +
Sbjct: 131 ASTAKIKSYINL-REVTERFHLPPGEYVIIPTTFEPHQEGEFILRVFSEKQSTSEETETT 189
Query: 155 SGTTKRQARQKAAADLYLNKHERAMERL 182
G T++ ++K ++++ RA + +
Sbjct: 190 IGQTQQDKKRKEKPIVFVSDRARANKEI 217
>UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep:
Ribonuclease 3 - Leptospira interrogans
Length = 247
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 6 TVLQEMMMKLGQI-PEYECVAQSGPQHQATFEFRCKALGE-SVSASARSKREAKQEAARA 63
T LQE K +I P Y ++SGP H TF+ + + S S SK+ A+Q AA+
Sbjct: 179 TQLQEYSQKHFKILPIYRTKSESGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKE 238
Query: 64 M 64
+
Sbjct: 239 L 239
>UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON
DNA-binding protein isoform A; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to SON DNA-binding
protein isoform A - Tribolium castaneum
Length = 626
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 2 KTPITVLQEMMMK--LGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQE 59
K P+++L E K LG P+Y+ + GP H+ F F+ G + S + + +
Sbjct: 553 KHPVSLLGEYASKKKLGA-PQYDLCFECGPDHKKNFLFKVTLNGVEYKPNVASPNKKEAK 611
Query: 60 AARAMLLCLSTIG 72
AA A +CL +G
Sbjct: 612 AAAAS-VCLQHLG 623
>UniRef50_Q4Q981 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1731
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 121 KLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAAADLYLNKHERAM 179
KL E +A T PA +L +I G H+ + T +A + D+ + KH RAM
Sbjct: 536 KLQSTESPTLAVTTPAVDQLRGAARNIAGSHAVPSEPTAATEAAGEEGTDVRVRKHSRAM 595
Query: 180 ERLVETT 186
RL+ +T
Sbjct: 596 ARLMSST 602
>UniRef50_Q4SXU5 Cluster: Chromosome undetermined SCAF12326, whole
genome shotgun sequence; n=4; Clupeocephala|Rep:
Chromosome undetermined SCAF12326, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1012
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 58 QEAARAMLLCLSTIG--HR-VPPPFATEFTQPSHSNQSAGECSEGKAPTVDSRSYVA 111
Q A R + +C+ G HR +PPP A H + GE +EG+ P + R A
Sbjct: 511 QPALRGLEVCVEHQGDQHRGIPPPEARPLPPRLHPQRDPGETAEGRGPRAEGRGPAA 567
>UniRef50_Q6R257 Cluster: DsRNA-binding protein; n=1; Solanum
lycopersicum|Rep: DsRNA-binding protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 318
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 18 IPEYECVAQSGPQHQATFEFRCKALG-ESVSASARSKREAKQEAARAMLLCLSTIG 72
IP+YEC +F G + + A+AR+K+EA+ +AAR LL + + G
Sbjct: 1 IPQYECERYDSESKIISFTCTVDVGGMKYIGAAARTKKEAEIKAARTALLAVQSSG 56
>UniRef50_Q57WE5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 840
Score = 33.9 bits (74), Expect = 5.6
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 186 TPAPWKPDLGQRVSEYHYGLISHTGECTARSRRRLPVVLDQCLRRAMVDTDP---EKRMA 242
+P P++ G SEY LI+ +R R P L Q ++ V DP + ++
Sbjct: 585 SPVPYQATTGSAASEYETPLINPRAFYLSREAHREPSPLAQDVQNTDVSNDPHDNQPQLP 644
Query: 243 ARAVLSETDDIXXXXXXXXXXXXXQTCWETLDPLHVLKLDAA 284
++L+ D Q + TL PL +DA+
Sbjct: 645 GESLLNGCTDSAYATQKAGRLPSGQYSFCTLSPLSEYHVDAS 686
>UniRef50_O74424 Cluster: Nucleoporin nup211; n=1; Schizosaccharomyces
pombe|Rep: Nucleoporin nup211 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1837
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 130 VADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYLNKHERAMERLVETTPAP 189
V +T P + + +A +G ++ +AS + + + +A L ++ ++R + P P
Sbjct: 1719 VTETKPVTSKPTASKADVGQNATEASSAKREPSGKSLSARLQGTGKQKGVQRPAVSRPVP 1778
Query: 190 WKPDLGQ 196
KPD G+
Sbjct: 1779 MKPDSGK 1785
>UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III),
double-stranded RNA binding motif; n=14;
Bacteroidetes|Rep: Ribonuclease III (Rnase III),
double-stranded RNA binding motif - Flavobacteria
bacterium BBFL7
Length = 246
Score = 33.5 bits (73), Expect = 7.4
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 108 SYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLH-SRDASGTTKRQARQKA 166
SY ++L E C++ K Y DTG +R FSV+ SI A T+K++A +KA
Sbjct: 173 SYKSILIEWCQKNKKT-FNYHTYEDTGVNEIRHFSVKLSIDDRVLAKARATSKKKAEEKA 231
Query: 167 AADLY 171
+ Y
Sbjct: 232 SKRAY 236
>UniRef50_A5BPJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 292
Score = 33.5 bits (73), Expect = 7.4
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 7 VLQEMMMKLG-QIPEYECVAQSGPQHQATFEFRCKALGES-VSASARSKREAKQEAARA 63
+LQEM K G Q+P Y +SG H TF + GE+ V A++K+ A+ AA+A
Sbjct: 226 LLQEMARKEGYQLPVYS-TEKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKA 283
>UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4;
Drosophila|Rep: Maternal effect protein staufen -
Drosophila melanogaster (Fruit fly)
Length = 1026
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAA 61
K+PI+ + E+ +K ++ + + GP H F C K+ +K+ AA
Sbjct: 577 KSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAA 636
Query: 62 RAMLLCLSTIGHRVP 76
ML+ L + P
Sbjct: 637 EKMLVELQKLPPLTP 651
>UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14;
Gammaproteobacteria|Rep: Ribonuclease 3 - Xylella
fastidiosa
Length = 227
Score = 33.5 bits (73), Expect = 7.4
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 2 KTPITVLQEMMM-KLGQIPEYECVAQSGPQHQATFEFRCKALGE---SVSASARSKREAK 57
K P T LQE + + +P YE + +SG H F C LGE S+R A+
Sbjct: 154 KDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFRVSC-TLGELKLRTEGEGSSRRLAE 212
Query: 58 QEAA 61
Q+AA
Sbjct: 213 QDAA 216
>UniRef50_UPI00015B62CC Cluster: PREDICTED: similar to CG31045-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG31045-PA - Nasonia vitripennis
Length = 2157
Score = 33.1 bits (72), Expect = 9.8
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 6/162 (3%)
Query: 44 ESVSASARSKREAKQEAARAMLLCLSTIGHRVPPPFATE--FTQPSHSNQSAGECSEGKA 101
+S +A R+K ++ Q+AAR + L A E T+ + A E +E +
Sbjct: 1967 QSETALLRTKEQSAQDAARRLQRSLREAREEAATASAREQEATRARRDLEKALEAAEAET 2026
Query: 102 PTVDSRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQ 161
V +AL + E+ + ++ L D + + R + +
Sbjct: 2027 KVVKDDLRLALQR--IEDLQ-SAIQGELDLDCSEEIVSAMGAPTATTDRMRPLHVARRSR 2083
Query: 162 ARQKAAADLYLNKHERAMERLVETTPAPWKPDLGQRVSEYHY 203
+ A D + H+RA R V+ A + GQR S+YHY
Sbjct: 2084 QSKAGAVDSSIGSHQRATRRSVKRRRADVRRS-GQRSSKYHY 2124
>UniRef50_UPI0000E4A971 Cluster: PREDICTED: similar to dsRNA adenosine
deaminase; n=11; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to dsRNA adenosine deaminase -
Strongylocentrotus purpuratus
Length = 1733
Score = 33.1 bits (72), Expect = 9.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 2 KTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVS-ASARSKREAKQEA 60
K P++ L E + + QSGP H F F G ++RSK++ ++EA
Sbjct: 1248 KNPVSALTEYAQARHLPVSIDLLQQSGPPHNPRFVFAACVGGRRFQHVTSRSKKDGRREA 1307
Query: 61 ARAMLLCLSTIGHRVP 76
A L L G P
Sbjct: 1308 ADMALRTLVAEGSLQP 1323
>UniRef50_Q30ZL8 Cluster: Pyruvate carboxylase, putative; n=3;
Desulfovibrio|Rep: Pyruvate carboxylase, putative -
Desulfovibrio desulfuricans (strain G20)
Length = 1238
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 176 ERAMERLVETTPAPWK---PDLGQRVSEYHYGLISHTG 210
+R ++L+E TP+PWK P+L R+ +Y L+ G
Sbjct: 243 QRNHQKLIEITPSPWKGITPELRARLKDYSRQLVQEVG 280
>UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:
Ribonuclease III - Roseiflexus sp. RS-1
Length = 237
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 19 PEYECVAQSGPQHQATFEFRCKALGESV-SASARSKREAKQEAARAML 65
P Y + +SGP+H+ F +A E + + SK+ A+Q AARA L
Sbjct: 180 PRYHEIDRSGPEHRPEFTVEVRAGEERLGTGKGPSKQAAEQAAARAAL 227
>UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter
propionicus DSM 2379|Rep: Ribonuclease III - Pelobacter
propionicus (strain DSM 2379)
Length = 234
Score = 33.1 bits (72), Expect = 9.8
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 113 LKELCEEYKLPGVEYALVADTGPAHMRLFSVRASI-GLHSRDASGTTKRQARQKAA 167
L+EL +LP Y L ++GP H RLF + + + G +K+ A+Q AA
Sbjct: 164 LQELLSARRLPSPVYRLTGESGPPHDRLFIFQVLVDDAVVGEGEGRSKKIAQQAAA 219
>UniRef50_Q6IJI9 Cluster: HDC14842; n=1; Drosophila
melanogaster|Rep: HDC14842 - Drosophila melanogaster
(Fruit fly)
Length = 151
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 197 RVSEYHYGLISHTGECTARSRRRLPVVLDQCLRRAMVDTDPEKRMAARAVL 247
R E H+ I+ T C R R LPV +D +D D ++R +A A+L
Sbjct: 95 RQFELHFNAITRTSICPIRPLRPLPVGVDTLHPEGPLDRDNKQRQSAVALL 145
>UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep:
Ribonuclease 3 - Rickettsia conorii
Length = 227
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 4 PITVLQEMMMKLGQ-IPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAAR 62
P T LQE +P Y + + G H +TF K + + + +EA++ AAR
Sbjct: 159 PKTALQEWAQASDHHLPIYRLIKREGASHSSTFTVLVKVKDYEQTGTGHTIKEAEKNAAR 218
Query: 63 AML 65
++L
Sbjct: 219 SLL 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.129 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,207,840
Number of Sequences: 1657284
Number of extensions: 11240715
Number of successful extensions: 27494
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 27221
Number of HSP's gapped (non-prelim): 297
length of query: 320
length of database: 575,637,011
effective HSP length: 101
effective length of query: 219
effective length of database: 408,251,327
effective search space: 89407040613
effective search space used: 89407040613
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 72 (33.1 bits)
- SilkBase 1999-2023 -