GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001077-TA|BGIBMGA001077-PA|IPR001159|Double-stranded RNA
binding
         (320 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    25   3.7  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    24   4.9  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   4.9  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   8.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   8.6  

>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 172 LNKHERAMERLVETTPAPWKPDLGQRVSEYHYGLISHTGECTARSRRRLPVVLDQCLRRA 231
           L      +E+L +    P   + G+++++     + +  EC+A +++ L  V D  +  A
Sbjct: 62  LRDENSTLEKLAKNKQKPITLEQGEKLAK-ELKAVKYV-ECSALTQKGLKNVFDVAILAA 119

Query: 232 MVDTDPEKRMAAR 244
           +   +P K+   R
Sbjct: 120 LEPPEPTKKRKCR 132


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 178 AMERLVETTPAPWKPDLGQRVSEYHYGLI 206
           A +R+ E   A W+ D+G  +  +H+ L+
Sbjct: 187 ASDRVDEQRVAYWREDIGLSLHHWHWHLV 215


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 178 AMERLVETTPAPWKPDLGQRVSEYHYGLI 206
           A +R+ E   A W+ D+G  +  +H+ L+
Sbjct: 187 ASDRVDEQRLAYWREDIGVNLHHWHWHLV 215


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 106 SRSYVALLKELCEEYKLPGVEYA-LVADTGPAHMRLFSVRASIGLHSRDASGTTKRQ 161
           S+S+   L++  E  ++PG  YA   A++ P       +   +GL+ R  + TT  Q
Sbjct: 38  SKSFSRALQDCMEYLQVPGYRYAEYAANSFPDDPETKCLLRCVGLNLRWWNDTTGMQ 94


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 135 PAHMRLFSVRASIGLHSRDASGTTKRQ 161
           P H+  +  R  IG  + +A+G TKRQ
Sbjct: 257 PPHIYPWMKRVHIGQSTVNANGETKRQ 283


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.129    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,098
Number of Sequences: 2123
Number of extensions: 10707
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 5
length of query: 320
length of database: 516,269
effective HSP length: 64
effective length of query: 256
effective length of database: 380,397
effective search space: 97381632
effective search space used: 97381632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)