Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001076-TA|BGIBMGA001076-PA|IPR002110|Ankyrin,
IPR013093|ATPase AAA-2
(326 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 73 3e-13
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 70 2e-12
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 64 9e-11
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 64 1e-10
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 64 1e-10
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 64 1e-10
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 64 2e-10
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila... 33 0.26
At4g37870.1 68417.m05356 phosphoenolpyruvate carboxykinase [ATP]... 31 1.1
At5g65690.1 68418.m08266 phosphoenolpyruvate carboxykinase [ATP]... 31 1.4
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 31 1.4
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 31 1.4
At2g47450.1 68415.m05922 chloroplast signal recognition particle... 31 1.4
At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to ... 31 1.4
At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR... 30 1.8
At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding ... 30 1.8
At1g71210.1 68414.m08217 pentatricopeptide (PPR) repeat-containi... 30 2.4
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 29 3.2
At2g03430.1 68415.m00301 ankyrin repeat family protein contains ... 29 3.2
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 29 4.2
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 29 5.6
At3g16940.1 68416.m02165 calmodulin-binding protein similar to a... 29 5.6
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 29 5.6
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 29 5.6
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 29 5.6
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 28 7.4
At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ... 28 7.4
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 28 7.4
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 28 7.4
At5g64220.1 68418.m08067 calmodulin-binding protein similar to a... 28 9.8
At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containi... 28 9.8
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 28 9.8
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 28 9.8
At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR ... 28 9.8
At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR ... 28 9.8
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 28 9.8
At1g58390.1 68414.m06643 disease resistance protein (CC-NBS-LRR ... 28 9.8
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 28 9.8
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPLV-FLFLGSSGIGKTELAKQLARY 251
LE L + +VGQ A+ VA A++R G +D P+ F+F+G +G+GKTELAK LA Y
Sbjct: 642 LEEELHKRVVGQNPAVTAVAEAIQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASY 701
Query: 252 MHKDDPAAFIRLDMSEY 268
M + A +R+DMSEY
Sbjct: 702 MFNTE-EALVRIDMSEY 717
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 270 GRLTDGKGKLIECKDAIFVMTSNLAADEI 298
GR+TD +G+ + + + +MTSN+ + I
Sbjct: 777 GRVTDSQGRTVSFTNTVIIMTSNVGSQFI 805
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPLV-FLFLGSSGIGKTELAKQLARY 251
LE L ++GQ A+ +VA A+RR G +D + P+ F+F+G +G+GKTELAK LA Y
Sbjct: 647 LEEVLHHRVIGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGY 706
Query: 252 MHKDDPAAFIRLDMSEY 268
+ + A +R+DMSEY
Sbjct: 707 LFNTE-NAIVRVDMSEY 722
Score = 32.7 bits (71), Expect = 0.34
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 270 GRLTDGKGKLIECKDAIFVMTSNLAADEIAQ 300
GR+TD +G+ + K+ + +MTSN+ + I +
Sbjct: 782 GRITDSQGRTVSFKNCVVIMTSNIGSHHILE 812
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 64.5 bits (150), Expect = 9e-11
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPLV-FLFLGSSGIGKTELAKQLARY 251
+E L + I+GQ A+ ++ A+RR G + + P+ F+F G +G+GK+ELAK LA Y
Sbjct: 602 MEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661
Query: 252 MHKDDPAAFIRLDMSEYQGRLTDGK 276
+ A IRLDMSE+ R T K
Sbjct: 662 YFGSE-EAMIRLDMSEFMERHTVSK 685
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 252 MHKDDPAAFIRLDMSEYQGRLTDGKGKLIECKDAIFVMTSNLAADEIAQYGLQLRREAD 310
+ K P F + GRLTD KG+ ++ K+ + +MTSN+ + I + G ++ + D
Sbjct: 719 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 777
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPL-VFLFLGSSGIGKTELAKQL-AR 250
LE +L+ +VGQ A+ ++ AV+R G D D P+ LF G +G+GKTEL K L A
Sbjct: 621 LEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAAN 680
Query: 251 YMHKDDPAAFIRLDMSEYQGRLTDGK 276
Y ++ + +RLDMSEY R T K
Sbjct: 681 YFGSEE--SMLRLDMSEYMERHTVSK 704
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 252 MHKDDPAAF-IRLDMSEYQGRLTDGKGKLIECKDAIFVMTSNLAADEIAQ 300
+ K P F I L + E G LTD +G+ + K+A+ +MTSN+ + IA+
Sbjct: 738 IEKAHPDIFNILLQLFE-DGHLTDSQGRRVSFKNALIIMTSNVGSLAIAK 786
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPL-VFLFLGSSGIGKTELAKQLARY 251
L +L + +VGQ A+ VAAA+ R G P FLFLG +G+GKTELAK LA
Sbjct: 528 LADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQPSGSFLFLGPTGVGKTELAKALAEQ 587
Query: 252 MHKDDPAAFIRLDMSEYQGRLTDGK 276
+ D +RLDMSEY + + K
Sbjct: 588 LF-DSENLLVRLDMSEYNDKFSVNK 611
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPL-VFLFLGSSGIGKTELAKQLARY 251
L RL + +VGQ A++ V+ A+ R G P FLFLG +G+GKTELAK LA
Sbjct: 563 LADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQ 622
Query: 252 MHKDDPAAFIRLDMSEY 268
+ DD +R+DMSEY
Sbjct: 623 LF-DDENLLVRIDMSEY 638
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/29 (44%), Positives = 24/29 (82%)
Query: 270 GRLTDGKGKLIECKDAIFVMTSNLAADEI 298
GRLTDG+G+ ++ ++++ +MTSNL A+ +
Sbjct: 698 GRLTDGQGRTVDFRNSVIIMTSNLGAEHL 726
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 193 LERRLKQYIVGQRAAIHTVAAAVRRKENGWADDDHPLV-FLFLGSSGIGKTELAKQLARY 251
+E+ L ++GQ A+ ++ A+RR G + + P+ F+F G +G+GK+ELAK LA Y
Sbjct: 623 MEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 682
Query: 252 MHKDDPAAFIRLDMSEYQGRLTDGK 276
+ A IRLDMSE+ R T K
Sbjct: 683 YFGSE-EAMIRLDMSEFMERHTVSK 706
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 252 MHKDDPAAFIRLDMSEYQGRLTDGKGKLIECKDAIFVMTSNLAADEIAQYGLQLRREAD 310
+ K P F + GRLTD KG+ ++ K+ + +MTSN+ + I + G ++ + D
Sbjct: 740 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 798
>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
to ankyrin-kinase [Medicago truncatula]
gi|18700701|gb|AAL78674
Length = 471
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 38 DEGGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQEQY 82
D G VD R TAL VAA + DVV L+ GAK D ++++
Sbjct: 70 DSGTNVDYRDIDARTALHVAACQGRTDVVELLLSRGAKVDTKDRW 114
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/80 (26%), Positives = 31/80 (38%)
Query: 40 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQEQYXXXXXXXXXXXMHPLDA 99
G VD + G T L A DV++ L K GAKP + + +HP +
Sbjct: 105 GAKVDTKDRWGSTPLADAVYYKNHDVIKLLEKHGAKPTIAPMHVLTDKEVPEYEIHPTEL 164
Query: 100 LQRREDEFCGGMNARASFLG 119
+ G +AS+ G
Sbjct: 165 DFSNSVKISKGTFNKASWRG 184
>At4g37870.1 68417.m05356 phosphoenolpyruvate carboxykinase [ATP],
putative / PEP carboxykinase, putative / PEPCK, putative
similar to phosphoenolpyruvate carboxykinase
[Lycopersicon esculentum] GI:16950587, SP|Q9SLZ0
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
(PEP carboxykinase) (Phosphoenolpyruvate carboxylase)
(PEPCK) {Zea mays}; contains Pfam profile PF01293:
phosphoenolpyruvate carboxykinase
Length = 671
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 230 VFLFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
V LF G SG GKT L+ RY+ DD + +S +G
Sbjct: 364 VALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEG 404
>At5g65690.1 68418.m08266 phosphoenolpyruvate carboxykinase [ATP],
putative / PEP carboxykinase, putative / PEPCK, putative
similar to phosphoenolpyruvate carboxykinase
[Lycopersicon esculentum] GI:16950587, SP|Q9SLZ0
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
(PEP carboxykinase) (Phosphoenolpyruvate carboxylase)
(PEPCK) {Zea mays}; contains Pfam profile PF01293:
phosphoenolpyruvate carboxykinase
Length = 670
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 230 VFLFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
V LF G SG GKT L+ RY+ DD + +S +G
Sbjct: 363 VALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSEAGVSNIEG 403
>At3g03790.2 68416.m00389 ankyrin repeat family protein /
regulator of chromosome condensation (RCC1) family
protein similar to hect domain and RLD 2 GB:NP_004658
[Homo sapiens]; contains Pfam PF00415: Regulator of
chromosome condensation (RCC1); contains Pfam PF00023:
Ankyrin repeat; similar to rjs (GI:3414809) [Mus
musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens]
Length = 1081
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 40 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQE 80
GG ++ R+ G T L +A + +VR L+ GA PD ++
Sbjct: 52 GGNINLRNAYGLTPLHIAVWRNHIPIVRRLLAAGADPDARD 92
>At3g03790.1 68416.m00388 ankyrin repeat family protein /
regulator of chromosome condensation (RCC1) family
protein similar to hect domain and RLD 2 GB:NP_004658
[Homo sapiens]; contains Pfam PF00415: Regulator of
chromosome condensation (RCC1); contains Pfam PF00023:
Ankyrin repeat; similar to rjs (GI:3414809) [Mus
musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens]
Length = 1078
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 40 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQE 80
GG ++ R+ G T L +A + +VR L+ GA PD ++
Sbjct: 52 GGNINLRNAYGLTPLHIAVWRNHIPIVRRLLAAGADPDARD 92
>At2g47450.1 68415.m05922 chloroplast signal recognition particle
component (CAO) nearly identical to CAO [Arabidopsis
thaliana] GI:4102582
Length = 373
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 38 DEGGPVDRRHPLGW-TALMVAAANDKPDVVRELIKLGAKPDLQEQ 81
+ G +D R G TAL +AA +P+VV L++LGA +++++
Sbjct: 181 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 225
>At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to
regulatory protein NPR1 (nonexpresser of PR genes 1,
NPR1; noninducible immunity 1, Nim1; salicylic acid
insensitive 1, Sai1) [Arabidopsis thaliana]
SWISS-PROT:P93002
Length = 593
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 43 VDRRHPLGWTALMVAAANDKPDVVRELIKLGA 74
V+ R+P G+T L VAA +P ++ L++ GA
Sbjct: 322 VNHRNPRGYTVLHVAAMRKEPQLILSLLEKGA 353
>At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1231
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 218 KENGWADDDHPLVFLFLGSSGIGKTELAKQL-ARYMHKDDPAAFI--RLDMSEYQG---- 270
K N +D+ + +G GIGKT LAK+L A+ K + FI + +MS QG
Sbjct: 228 KLNVECNDNETRIVEVVGMPGIGKTYLAKKLFAKLKKKINHCVFIEFKREMSAEQGSEWL 287
Query: 271 --RLTDGKGKLIECKD 284
RL +G + +C D
Sbjct: 288 QKRLVEGLLDIQDCTD 303
>At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding
protein, putative (SR1) identical to partial sequence of
ethylene-induced calmodulin-binding protein GI:11545505
from [Arabidopsis thaliana]; contains Pfam profiles
PF03859: CG-1 domain, PF00612: IQ calmodulin-binding
motif, and PF00023: Ankyrin repeat
Length = 1032
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 40 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKP 76
G VD R GWTAL AA + ++ LI LGA P
Sbjct: 685 GVSVDFRDVNGWTALHWAAFFGRERIIGSLIALGAAP 721
>At1g71210.1 68414.m08217 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 879
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 26 LIAKESQQPKKDDEGGPVDRRHPLG---WTALMVAAA-NDKPDVVRELIKLGAKPDL 78
L A ES + D G +DR H LG ++ L A KPD+ REL+ A+ DL
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDL 493
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 223 ADDDHPLVF--LFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQGRLTDGK 276
A+DD+ +F + G SG+GK+ L + R D + I ++ + +G D K
Sbjct: 6 AEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDK 61
>At2g03430.1 68415.m00301 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 240
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 38 DEGGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQEQ 81
+EG +D +G TALM + D V LI+ GA D++++
Sbjct: 170 EEGAEIDATDKMGQTALMHSVICDDKQVAFLLIRHGADVDVEDK 213
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 232 LFLGSSGIGKTELAKQLARYMHK 254
L G SG GKTE AK L +Y+ K
Sbjct: 163 LVSGESGAGKTETAKMLMKYLAK 185
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 226 DHPLVFLFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEY 268
D P L G G GKT LAK +A + AAFIR+ SE+
Sbjct: 187 DPPRGVLLYGPPGTGKTMLAKAVANH----TTAAFIRVVGSEF 225
>At3g16940.1 68416.m02165 calmodulin-binding protein similar to
anther ethylene-upregulated protein ER1 GI:11612392 from
[Nicotiana tabacum]; contains Pfam profile: PF00612 IQ
calmodulin-binding motif (3 copies)
Length = 852
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 46 RHPLGWTALMVAAANDKPDVVRELIKLGAKPDL 78
R GWTAL AA + +V L+ GA+P+L
Sbjct: 539 RDKQGWTALHWAAYYGREKMVAALLSAGARPNL 571
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 LFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
L +GS G+GKT L +++AR + + + +D S G
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIG 255
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 LFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
L +GS G+GKT L +++AR + + + +D S G
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIG 255
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 261 IRLDMSEYQGRLTDGKGKLIECKDAI 286
+++D ++Q ++DGK KL+ C+ A+
Sbjct: 262 LKIDNQDFQASVSDGKLKLVRCRGAM 287
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 204 QRAAIHTVAAAVRRKENGWADDDHPLVFLFLGSSGIGKTELAKQLARYMH 253
+R+A T + A + ++ + + + L +G +G GKT LAK LAR+++
Sbjct: 200 KRSAGETDSTAAKPADDDMVELEKSNILL-MGPTGSGKTLLAKTLARFVN 248
>At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 600
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 43 VDRRHPLGWTALMVAAANDKPDVVRELIKLGA 74
V+ R+P G+T L VAA +P ++ L+ GA
Sbjct: 321 VNLRNPRGYTVLHVAAMRKEPKLIISLLMKGA 352
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 232 LFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
LF+G G+GKT + +++AR + + + +D S G
Sbjct: 168 LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIG 206
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 232 LFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMSEYQG 270
LF+G G+GKT + +++AR + + + +D S G
Sbjct: 168 LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIG 206
>At5g64220.1 68418.m08067 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1050
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 40 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLGA 74
G ++ R GW+AL AA + + D V L+ LGA
Sbjct: 685 GVSINFRDANGWSALHWAAFSGREDTVAVLVSLGA 719
>At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 207 AIHTVAAAVRRKENGWADDDHPLVFLFLGSSGIGKTELAKQLARYMHKDDPAAFIRLDMS 266
+I + AAV +G D PLV L S G L +QL Y+ K + RL S
Sbjct: 36 SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNS 95
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 223 ADDDHPLVF--LFLGSSGIGKTELAKQLAR 250
ADDD+ +F + +G SG+GK+ L + R
Sbjct: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTR 35
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 223 ADDDHPLVF--LFLGSSGIGKTELAKQLAR 250
ADDD+ +F + +G SG+GK+ L + R
Sbjct: 6 ADDDYDYLFKLVLIGDSGVGKSNLLSRFTR 35
>At3g50950.2 68416.m05579 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 216 RRKENGW---ADDDHPLVFLFLGSSGIGKTELAKQL 248
+RK W ++D L+ F+G G+GKT +A+++
Sbjct: 167 KRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEV 202
>At3g50950.1 68416.m05578 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 852
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 216 RRKENGW---ADDDHPLVFLFLGSSGIGKTELAKQL 248
+RK W ++D L+ F+G G+GKT +A+++
Sbjct: 167 KRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEV 202
>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 590
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 43 VDRRHPLGWTALMVAAANDKPDVVRELIKLGAKPDLQEQ 81
V+ + LG TAL AA DVV+EL+K ++ + ++
Sbjct: 122 VNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKK 160
>At1g58390.1 68414.m06643 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 907
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 224 DDDHPLVFLFLGSSGIGKTELAKQLARYMHKDDPAAFIRL 263
D+++ V G G+GKT LA+Q+ + H+D F RL
Sbjct: 179 DEENVQVVSITGMGGLGKTTLARQV--FNHEDVKHQFDRL 216
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 238 GIGKTELAKQLARYMHKDDPAAFIRLDMSEYQGRLTDGKGKLIECKDAIFVMTSNLAADE 297
G K +A+Q + + A ++ D ++ Q +L + K + + + I + SNL +E
Sbjct: 61 GKQKIYIARQDQFEIPNSEELAQMKEDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEE 120
Query: 298 IAQYGLQLRRE 308
I + +LR+E
Sbjct: 121 IQEKDAKLRKE 131
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,196,644
Number of Sequences: 28952
Number of extensions: 216133
Number of successful extensions: 831
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 47
length of query: 326
length of database: 12,070,560
effective HSP length: 81
effective length of query: 245
effective length of database: 9,725,448
effective search space: 2382734760
effective search space used: 2382734760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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