Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001075-TA|BGIBMGA001075-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase
         (443 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.35 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   4.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   10.0 

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.6 bits (56), Expect = 0.35
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 207 DIVLDNVPAHD-WGLAVSEYLIMVSTTVAMLVVVFHKHR 244
           DI +  VP+   WG+ V     +++T +A + V +++H+
Sbjct: 367 DINITTVPSEQQWGILVLIIAPLIATLIATVTVNYYRHK 405


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 124 TDAPQPATDESDPDQDHS 141
           + A  PA  E DPD+D+S
Sbjct: 5   SSASNPAVSERDPDEDNS 22


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 236  LVVVFHKHRFIVARRLFFIIGLLYLYRSITMFVTVLPVSSMTY 278
            L++ F  +  I+ + +F ++G L   +     + ++ +SS+TY
Sbjct: 1326 LLLFFGLNFLIITQAMFLVVGQLQASQIHWQKIIIIVMSSVTY 1368


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 225 YLIMVSTTVAMLVVVFHKHRFIVAR---RLFFIIGLLYLYRSITMFVTVLP 272
           +L+ V     +L+ ++ + R+   +   R++F I  L +   IT F++VLP
Sbjct: 46  FLVTVIGNSTVLLALWTRRRYAGRKKLSRMYFFILHLSIADLITAFLSVLP 96


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 10.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 395 GNGYNHYMIQREWWYWVFTYLERNVRGP 422
           G G   Y IQ +    V  +  R++RGP
Sbjct: 611 GLGAELYQIQEDGSRGVIAFASRSLRGP 638


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.138    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,762
Number of Sequences: 317
Number of extensions: 4323
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 443
length of database: 114,650
effective HSP length: 59
effective length of query: 384
effective length of database: 95,947
effective search space: 36843648
effective search space used: 36843648
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)