Silkworm BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001075-TA|BGIBMGA001075-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase
         (443 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.)             136   4e-32
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.35 
SB_1325| Best HMM Match : PTSIIA_gutA (HMM E-Value=8.3)                33   0.35 
SB_27592| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-39)                 33   0.35 
SB_40040| Best HMM Match : hATC (HMM E-Value=3.7e-08)                  33   0.46 
SB_13241| Best HMM Match : RTP801_C (HMM E-Value=4)                    32   1.1  
SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013)                  32   1.1  
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)                      30   3.3  
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.3  
SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.5  

>SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 542

 Score =  136 bits (328), Expect = 4e-32
 Identities = 64/170 (37%), Positives = 100/170 (58%), Gaps = 2/170 (1%)

Query: 167 EIWKTILSFFFLFMCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVPAHDWGLAVSEYL 226
           E W+T LS  + F+  C+    +++VH+R+PD     PL DI+LD+VP   W   + E+ 
Sbjct: 124 ETWRTFLSVLYAFLVFCLTSFVMTVVHDRVPDMKKYPPLPDIILDSVPLIPWAFTMCEFT 183

Query: 227 IMVSTTVAMLVVVFHKHRFIVARRLFFIIGLLYLYRSITMFVTVLPVSSMTYTCSPKSNS 286
            +V  ++ + V+  HKHR I+ RR+  + G ++L R +TMFVT L V  +   CS K   
Sbjct: 184 GIVLWSMWVAVLFLHKHRMILIRRMMALAGTVFLLRCVTMFVTSLSVPGIHLECSGKLYG 243

Query: 287 TAPLLIIKRMFYLISGFGLSINGKHTYCGDYIYSGHTMVLVLSYLIVAEY 336
                 + R F ++ GFG+S+NG  + CGDY++SGHT+V+ L    + EY
Sbjct: 244 DV-WAKLHRAFEIMFGFGMSVNGVRS-CGDYMFSGHTVVITLLNFFITEY 291


>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 609

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 175 FFFLFMCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVPAHDWGLAVSEYLIMVS 230
           FF +F  V + ++SL+L+   +  +   + L D+ LD V  +   + +  YL M+S
Sbjct: 484 FFVIF--VSLGLLSLNLIESEMSPKQKLRALQDVFLDTVTKNSRVIQLQNYLPMIS 537


>SB_1325| Best HMM Match : PTSIIA_gutA (HMM E-Value=8.3)
          Length = 160

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 180 MCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVPAHDWGLAVSEYLIMVSTTVAMLVVV 239
           M +  N+   +L H   P+ +    LN  V+   P   W  A     +M +   +M++V 
Sbjct: 1   MNITSNVSHAALFH---PNTSHGHHLNTTVMSTFPILAWSTAYGTIAVMAAFGNSMVIVA 57

Query: 240 FHKHRFIVARRLFFIIGL 257
           F ++  +  R  FF+IGL
Sbjct: 58  FVRNLKLHTRTNFFVIGL 75


>SB_27592| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-39)
          Length = 340

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 180 MCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVPAHDWGLAVSEYLIMVSTTVAMLVVV 239
           M +  N+   +L H   P+ +    LN  V+   P   W  A     +M +   +M++V 
Sbjct: 1   MNITSNVSHAALFH---PNTSHGHHLNTTVMSTFPILAWSTAYGTIAVMAAFGNSMVIVA 57

Query: 240 FHKHRFIVARRLFFIIGL 257
           F ++  +  R  FF+IGL
Sbjct: 58  FVRNLKLHTRTNFFVIGL 75


>SB_40040| Best HMM Match : hATC (HMM E-Value=3.7e-08)
          Length = 824

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 340 KLWPMHWAMAGSAVMGVSFVLLAHGHYTVDVVIAYYITTRLFWTFHSLLVTP 391
           +LWP H  MA     G +  LL   H ++ V + Y  TT L W +HS +V P
Sbjct: 770 QLWPHHSFMAAPLFYGRT-TLLWQCHSSMAVPLFYGRTT-LLWQYHSSMVVP 819



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 340 KLWPMHWAMAGSAVMGVSFVLLAHG------HYTVDVVIAYYITTRLFWTFHSLLVTP 391
           +LWP H ++A     G + +L  +       H++   V  +Y +T L W FHS +  P
Sbjct: 600 QLWPYHSSVAVPLFYGRTTLLWPYTTLQLWPHHSFMAVPLFYGSTTLLWPFHSSMAVP 657



 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 341 LWPMHWAMAGSAVMGVSFVLLAHGHYTVDVVIAYYITTRLFWTFHSLLVTP 391
           LWP H++MA     G +  L    H++      +Y  T L W  HS +  P
Sbjct: 751 LWPYHFSMAVPLFYGRT-TLQLWPHHSFMAAPLFYGRTTLLWQCHSSMAVP 800



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 258 LYLYRSITMFVTVLPVSSMTYTCSPKSNSTAPLLIIKRMFYLISGFGLSINGKHTYCGDY 317
           L+ Y S  M V +           P  +S A  L   R   L     L +   H++    
Sbjct: 579 LWPYYSSAMAVPLFSYGRTIVQLWPYHSSVAVPLFYGRTTLLWPYTTLQLWPHHSFMAVP 638

Query: 318 IYSGHTMVL--VLSYLIVAEYSPKK--LWPMHWAMAGSAVMGVSFVLLAHGHYTVDVVIA 373
           ++ G T +L    S + V  +  +   LWP H + A +A +      L   H++   V  
Sbjct: 639 LFYGSTTLLWPFHSSMAVPLFYGRTTLLWPYH-SSAMTAPLFYGRTTLLWPHHSSMAVPL 697

Query: 374 YYITTRLFWTFHSLLVTP 391
           +Y  T L W  HS +  P
Sbjct: 698 FYGRTTLLWPNHSSMAVP 715


>SB_13241| Best HMM Match : RTP801_C (HMM E-Value=4)
          Length = 325

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)

Query: 198 DRNTTKPLNDIVLDNVPAHDWGLAVSEYLIMV----STTVAMLVVVFHKHRFIVARRLFF 253
           D+ T       VL N P+   GL ++E L+ +    S+ V + VV    H  I+  R   
Sbjct: 87  DKKTPALFEPDVLRNWPS---GLEINETLVQLQCGNSSRVCVDVVNNTNHNIILKGRT-- 141

Query: 254 IIGLLYLYRSITMFVTVLPVSSMTYTCSPKSNST 287
           ++G LYL RS+TM    LP+     T S + N T
Sbjct: 142 VLGKLYLVRSVTM----LPLDKPEITPSEELNMT 171


>SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
          Length = 994

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)

Query: 198 DRNTTKPLNDIVLDNVPAHDWGLAVSEYLIMV----STTVAMLVVVFHKHRFIVARRLFF 253
           D+ T       VL N P+   GL ++E L+ +    S+ V + VV    H  I+  R   
Sbjct: 491 DKKTPALFEPDVLRNWPS---GLEINETLVQLQCGNSSRVCVDVVNNTNHNIILKGRT-- 545

Query: 254 IIGLLYLYRSITMFVTVLPVSSMTYTCSPKSNST 287
           ++G LYL RS+TM    LP+     T S + N T
Sbjct: 546 VLGKLYLVRSVTM----LPLDKPEITPSEELNMT 575


>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
          Length = 476

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 124 TDAPQPATDESDPDQDHSPQRTHTGDFI 151
           TD   P TD SDP  DHS   T   D++
Sbjct: 447 TDHSDPLTDHSDPLTDHSDHVTDHSDYV 474



 Score = 29.1 bits (62), Expect = 7.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 124 TDAPQPATDESDPDQDHSPQRTHTGDFIIE 153
           TD   P TD SDP  DHS   T   D + +
Sbjct: 440 TDHSDPLTDHSDPLTDHSDPLTDHSDHVTD 469



 Score = 28.7 bits (61), Expect = 10.0
 Identities = 13/26 (50%), Positives = 13/26 (50%)

Query: 124 TDAPQPATDESDPDQDHSPQRTHTGD 149
           TD   P TD SDP  DHS   T   D
Sbjct: 412 TDRSDPVTDHSDPLTDHSDPLTDHSD 437


>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1533

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 155  PPGTVREERYPKEIWKTILSFFFLFMCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVP 214
            P G + E++    I+ ++L F F+ +   I   ++ L   + P   T  P N ++L N+ 
Sbjct: 1282 PSGIIVEDQLYPNIYISVLPFVFIALSAIILNGTVLLAIAKTPSLRT--PSNLVIL-NLA 1338

Query: 215  AHDWGLAVSEYLIMVSTTVAMLVVVF 240
              D+GL +S   ++V T+ A +   F
Sbjct: 1339 TTDFGLGIS---LLVFTSPAKIAFRF 1361


>SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 354

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 173 LSFFFLFMCVCINMISLSLVHERLPDRNTTKPLNDIVLDNVPAHDWGLAVS----EYLIM 228
           L F+  F+    NMI  SL    +       PL  +  + +P +++G+ ++    +  + 
Sbjct: 59  LIFYKRFLQTTTNMILGSLATSDMLTGLVVIPLI-VACNMLPTYNFGVCLAMDLGQRFLA 117

Query: 229 VSTTVAMLVVVFHKHRFIVARRLFF 253
           +ST + +LVV   ++ +IV  R+ +
Sbjct: 118 ISTILHLLVVTLERYHYIVVSRIVY 142


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.324    0.138    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,823,860
Number of Sequences: 59808
Number of extensions: 556538
Number of successful extensions: 1745
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1716
Number of HSP's gapped (non-prelim): 25
length of query: 443
length of database: 16,821,457
effective HSP length: 84
effective length of query: 359
effective length of database: 11,797,585
effective search space: 4235333015
effective search space used: 4235333015
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)