Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001074-TA|BGIBMGA001074-PA|IPR006539|Phospholipid-
translocating P-type ATPase, flippase, IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR005834|Haloacid
dehalogenase-like hydrolase, IPR013200|HAD superfamily hydrolase-like,
type 3
         (1118 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   1.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   1.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   1.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   6.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 642  KASIAIQDREQKIEEAADLVENN--LRLLGATAIEDKLQDGVPETIAALLKANINVWVLT 699
            K    +++ +++ EEA    +    L  L +    D  +  +  ++A L K  +      
Sbjct: 1068 KTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKA 1127

Query: 700  GDKQETAINIAHSARLIH 717
            GD++ + INIA S  +++
Sbjct: 1128 GDEKASLINIADSLEMLN 1145


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 642  KASIAIQDREQKIEEAADLVENN--LRLLGATAIEDKLQDGVPETIAALLKANINVWVLT 699
            K    +++ +++ EEA    +    L  L +    D  +  +  ++A L K  +      
Sbjct: 1068 KTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKA 1127

Query: 700  GDKQETAINIAHSARLIH 717
            GD++ + INIA S  +++
Sbjct: 1128 GDEKASLINIADSLEMLN 1145


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 642  KASIAIQDREQKIEEAADLVENN--LRLLGATAIEDKLQDGVPETIAALLKANINVWVLT 699
            K    +++ +++ EEA    +    L  L +    D  +  +  ++A L K  +      
Sbjct: 1068 KTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKA 1127

Query: 700  GDKQETAINIAHSARLIH 717
            GD++ + INIA S  +++
Sbjct: 1128 GDEKASLINIADSLEMLN 1145


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 642  KASIAIQDREQKIEEAADLVENN--LRLLGATAIEDKLQDGVPETIAALLKANINVWVLT 699
            K    +++ +++ EEA    +    L  L +    D  +  +  ++A L K  +      
Sbjct: 1068 KTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKA 1127

Query: 700  GDKQETAINIAHSARLIH 717
            GD++ + INIA S  +++
Sbjct: 1128 GDEKASLINIADSLEMLN 1145


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 69  LLIALLQQIPDVSPTGRWTTLTPLILILSVSAIKEI----VEDFKRHRADDETNXXXXXX 124
           ++  + +Q P     G +  +TP +L+  V  IK+I     + F  H +   TN      
Sbjct: 14  IIADIYRQFPTDRYVGYYHFMTPTLLLRDVELIKQIGVKEFDSFHDHVSVSNTNTEPLLS 73

Query: 125 XXXXXWVAIRWEHLQ 139
                    +W+ ++
Sbjct: 74  EALTNLPGEKWKEMR 88


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,097
Number of Sequences: 317
Number of extensions: 9994
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 5
length of query: 1118
length of database: 114,650
effective HSP length: 64
effective length of query: 1054
effective length of database: 94,362
effective search space: 99457548
effective search space used: 99457548
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)