GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001074-TA|BGIBMGA001074-PA|IPR006539|Phospholipid-
translocating P-type ATPase, flippase, IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR005834|Haloacid
dehalogenase-like hydrolase, IPR013200|HAD superfamily hydrolase-like,
type 3
         (1118 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    26   6.4  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        25   8.4  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 207 AQPDTARLDAAPALADFRATVQCEPPNRHLYEFNGLLKEANVKTLP--LGLDQML 259
           A+P  A    AP L   RAT+Q       L E N  +KE N K L    G+ Q+L
Sbjct: 104 AEPKAASATPAPELELLRATIQ------RLEEQNCAMKEQNAKLLEQITGMCQLL 152


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 792 PIQKAEVVELVSGATGAVTLAIGDGANDVAMIQRASVGVGISGVE-GLQAVCASDYSI 848
           P+Q+  + E+ S       LA G GA D   + R     GI+  E G +A  A++  +
Sbjct: 311 PLQQVGIREIFSQNASLPLLARGRGARDEVRVSRIFQKAGITINELGSEAYAATEIQL 368


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,062,337
Number of Sequences: 2123
Number of extensions: 41932
Number of successful extensions: 141
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 2
length of query: 1118
length of database: 516,269
effective HSP length: 71
effective length of query: 1047
effective length of database: 365,536
effective search space: 382716192
effective search space used: 382716192
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)