Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001073-TA|BGIBMGA001073-PA|IPR000462|CDP-alcohol
phosphatidyltransferase
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 146 7e-36
SPAPB17E12.02 |yip12|yip1, yip1-b|SMN family protein Yip12|Schiz... 31 0.44
SPAC19B12.12c |yip11|yip1, yip1-a|SMN family protein Yip11|Schiz... 31 0.44
SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol 3-phosphatidyltra... 29 1.0
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 29 1.3
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 28 2.3
SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2 |Schizosa... 27 7.2
SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 7.2
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 9.5
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 146 bits (353), Expect = 7e-36
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 9 LNAAQLKRLSEHKYSCTSASVLDAW-LQP-WWCWLVSKTPLWLAPNLITILGL---IVNI 63
LN QLK L +KYS S+L + L+P WW L+ P+ +APNLIT++GL ++NI
Sbjct: 3 LNRKQLKNLHNYKYSAIDNSLLSKYILKPYWWNQLLKVIPMSMAPNLITLIGLGFVVINI 62
Query: 64 VTTLILVW-YSPDARQDPPRWACALCALGVFVYQSLDAIDGKQARRTGSQSPLGELFDHG 122
+T L+ + Y DA P W A A+G+F+YQS DAIDG QARRTG+ SPLG+LFDHG
Sbjct: 63 LTMLVYKYHYEMDAF---PSWVYASWAIGLFLYQSFDAIDGSQARRTGTSSPLGQLFDHG 119
Query: 123 CDSISTVFIALGACIAVKLGEYPTWMFFQCFCAMTLFYCAHWQAYVTGTLKMGRID-VTE 181
D+I+T F L ++L + + F ++ FY + W+ Y TGTL + E
Sbjct: 120 VDAINTSFEVLLTIELLQLDMFSS--ILTQFASLLYFYISTWEEYHTGTLYLSYFSGPVE 177
Query: 182 AQFSIIGIHLISAVLGPDFW 201
+IG+ ++A+ G FW
Sbjct: 178 GIVMVIGLFALTAIKGDSFW 197
Score = 28.3 bits (60), Expect = 2.3
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 296 LSPVIPFSLVVVPAFIIFQKSESHVYENHPALYILAFGMVTAKVTNKLVVAHMTKSEMEY 355
LS ++P+ L + F ++ K + +E+H + A ++V+H+T+S Y
Sbjct: 257 LSGILPYFLQWMAVFSLYAKYPAF-FEHHFLTIFCLNAFIFAYSVGVVIVSHITESPFPY 315
Query: 356 YDWSLLGPAMLFLNQYFNNALPEYWV-LWLCTVWVC-GELVRYCGQVCREICDHLDIQLF 413
++ +L + ++ Y L + C V +C G + V I + I+
Sbjct: 316 WNVLILPFLVDAVDAYTFGVLKNVQTEYFFCYVGICIGVYGNFVAHVIAMITEEYGIKCL 375
Query: 414 RI 415
I
Sbjct: 376 TI 377
>SPAPB17E12.02 |yip12|yip1, yip1-b|SMN family protein
Yip12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 30.7 bits (66), Expect = 0.44
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 15 KRLSEHKYSCT-SASVLDAWLQPWWCWLVSKTPLWLAPNLITILGLIVNIVTTLILVWYS 73
+RL ++ S + AS+L LQ W ++ K P W A + L ++ I+ +L W
Sbjct: 108 ERLEQYMESSSLDASILPKNLQQWRVYIEHKAPCW-AILAVVDLATVLEILESL-SSWLE 165
Query: 74 PDARQDPPRWACALC 88
DA +W C
Sbjct: 166 KDAIDLQSQWIFCFC 180
>SPAC19B12.12c |yip11|yip1, yip1-a|SMN family protein
Yip11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 30.7 bits (66), Expect = 0.44
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 15 KRLSEHKYSCT-SASVLDAWLQPWWCWLVSKTPLWLAPNLITILGLIVNIVTTLILVWYS 73
+RL ++ S + AS+L LQ W ++ K P W A + L ++ I+ +L W
Sbjct: 108 ERLEQYMESSSLDASILPKNLQQWRVYIEHKAPCW-AILAVVDLATVLEILESL-SSWLE 165
Query: 74 PDARQDPPRWACALC 88
DA +W C
Sbjct: 166 KDAIDLQSQWIFCFC 180
>SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol
3-phosphatidyltransferase Pis1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 29.5 bits (63), Expect = 1.0
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 83 WACALCALGVFVYQSL-DAIDGKQARRTGSQSPLGELFDHGCDSISTVFIALGACIAVKL 141
W C + V++Y SL DA DG AR+ + G + D D +T + C A
Sbjct: 50 WHPNYCTI-VYLYSSLLDAFDGWAARKLHQATNFGAILDMVTDRCATSCLLCFLCAA--- 105
Query: 142 GEYPTW-MFFQCFCAMTLFYCAHWQAYVTGTLKMG 175
YP + + FQ ++ L +H+ ++ TL G
Sbjct: 106 --YPKYAIIFQLLVSLDL--ASHYM-HMYSTLHQG 135
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 209 LEIRYSVALAAIVGAFLTIGTLAAAIVSGGVGK--NGSTVALPTIKISVNLISNYV 262
LE+ S L VG F T+GTL+ A+ + + G + A+ T+ +++ +S YV
Sbjct: 623 LEVTVSTTLR--VGLFRTLGTLSGAVYAYAAWEVSQGWSYAIATLTFAISWVSCYV 676
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 12 AQLKRLSEHKYSCTSASVLDAWLQPWWCWLVSKTPLW 48
A+L+R E Y+C +V+ + W +++ +TP+W
Sbjct: 141 AKLRRFEEQAYTCLYFTVMGS----WGLYVMKQTPMW 173
>SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 322 ENHPALYILAFGMVTAKVTNKLVVAHMTKSEMEYYDWSLLGPAMLFLNQYFNNALPEYWV 381
EN+P L + +VT+ + V M+ +++ LL PA F+NQ + E
Sbjct: 220 ENYPNLVLPGPLLVTSMLEYFRSVYPQMSKNMKRFEFRLLSPA--FVNQPLRICISETGN 277
Query: 382 LWL 384
LW+
Sbjct: 278 LWI 280
>SPBC660.17c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 127 STVFIALGACIAVKLGEYPTWMFFQCFCAMTLFYCAH 163
S +F L + V L YP + F+ ++LFYCA+
Sbjct: 48 SIIFSFLYLLLIVPLFLYPEYWAFKLVELLSLFYCAY 84
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 289 TVAGTSILSPVIPFSLVVVPAFIIFQKSESHVYENHPALYILAFGMV 335
T+ +S +S ++ ++VV+P I + S + + HP L++LA GM+
Sbjct: 763 TLVVSSFISHIVA-AMVVLP---IVHEVGSRLADPHPRLFVLASGMM 805
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.327 0.138 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,106
Number of Sequences: 5004
Number of extensions: 69973
Number of successful extensions: 224
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 217
Number of HSP's gapped (non-prelim): 10
length of query: 454
length of database: 2,362,478
effective HSP length: 75
effective length of query: 379
effective length of database: 1,987,178
effective search space: 753140462
effective search space used: 753140462
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -