GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001072-TA|BGIBMGA001072-PA|IPR002110|Ankyrin,
IPR013069|BTB/POZ, IPR009072|Histone-fold, IPR000210|BTB
         (1133 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   6.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   6.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   6.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   8.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 698 DVCTLTPLQVACGVGNLELVQLL-LSNGAD 726
           D CT+   Q A  V N ELV L  L+ G+D
Sbjct: 150 DSCTVNNYQDASNVRNCELVGLADLNQGSD 179


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 698 DVCTLTPLQVACGVGNLELVQLL-LSNGAD 726
           D CT+   Q A  V N ELV L  L+ G+D
Sbjct: 151 DSCTVNNYQDASNVRNCELVGLADLNQGSD 180


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 698 DVCTLTPLQVACGVGNLELVQLL-LSNGAD 726
           D CT+   Q A  V N ELV L  L+ G+D
Sbjct: 151 DSCTVNNYQDASNVRNCELVGLADLNQGSD 180


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 879 YECLPLLFNILRYSKQLILAQKE 901
           Y  +  LF+I+R  +QL LA++E
Sbjct: 39  YPIIGNLFDIMRTPEQLFLAERE 61


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,107
Number of Sequences: 317
Number of extensions: 7216
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 1133
length of database: 114,650
effective HSP length: 64
effective length of query: 1069
effective length of database: 94,362
effective search space: 100872978
effective search space used: 100872978
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)